EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000005565 (Gene tree)
Gene ID: 100562943
Gene Symbol: XRN2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 55927 bases
Position: chr4:81316733-81372659
Accession: 100562943
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000005554	XRN_N	PF03159.18	8.1e-94	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000005676	XRN2-201	5609	XM_003220068	ENSACAP00000005554	958 (aa)	XP_003220116	G1KEH8

Gene Model

Click here to download ENSACAG00000005565's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03008	Ribosome biogenesis in eukaryotes	KEGG
acs03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000005565's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000005565	XRN2	100	80.538	ENSG00000088930	XRN2	100	80.538	Homo_sapiens
ENSACAG00000005565	XRN2	97	69.958	ENSAPOG00000009818	xrn2	100	69.161	Acanthochromis_polyacanthus
ENSACAG00000005565	XRN2	100	80.952	ENSAMEG00000012581	XRN2	100	80.952	Ailuropoda_melanoleuca
ENSACAG00000005565	XRN2	90	70.475	ENSACIG00000015047	xrn2	95	73.714	Amphilophus_citrinellus
ENSACAG00000005565	XRN2	97	70.190	ENSAOCG00000023632	xrn2	100	69.556	Amphiprion_ocellaris
ENSACAG00000005565	XRN2	97	70.168	ENSAPEG00000014871	xrn2	100	69.363	Amphiprion_percula
ENSACAG00000005565	XRN2	96	72.228	ENSATEG00000001273	xrn2	99	70.606	Anabas_testudineus
ENSACAG00000005565	XRN2	97	84.632	ENSAPLG00000013869	XRN2	100	84.632	Anas_platyrhynchos
ENSACAG00000005565	XRN2	100	80.849	ENSANAG00000020126	XRN2	100	80.849	Aotus_nancymaae
ENSACAG00000005565	XRN2	89	73.757	ENSACLG00000010522	xrn2	77	98.667	Astatotilapia_calliptera
ENSACAG00000005565	XRN2	100	70.234	ENSAMXG00000018301	xrn2	100	70.234	Astyanax_mexicanus
ENSACAG00000005565	XRN2	100	80.331	ENSBTAG00000011304	XRN2	100	81.339	Bos_taurus
ENSACAG00000005565	XRN2	86	53.738	WBGene00006964	xrn-2	99	50.000	Caenorhabditis_elegans
ENSACAG00000005565	XRN2	100	80.538	ENSCJAG00000005611	XRN2	100	80.538	Callithrix_jacchus
ENSACAG00000005565	XRN2	100	80.849	ENSCAFG00000005185	XRN2	100	80.849	Canis_familiaris
ENSACAG00000005565	XRN2	100	80.849	ENSCAFG00020027479	XRN2	100	80.849	Canis_lupus_dingo
ENSACAG00000005565	XRN2	100	80.331	ENSCHIG00000006921	XRN2	100	80.331	Capra_hircus
ENSACAG00000005565	XRN2	100	79.710	ENSTSYG00000008315	XRN2	100	79.710	Carlito_syrichta
ENSACAG00000005565	XRN2	97	70.000	ENSCAPG00000010773	XRN2	99	68.936	Cavia_aperea
ENSACAG00000005565	XRN2	100	80.435	ENSCPOG00000009407	XRN2	100	80.435	Cavia_porcellus
ENSACAG00000005565	XRN2	100	80.538	ENSCATG00000040350	XRN2	100	80.538	Cercocebus_atys
ENSACAG00000005565	XRN2	100	81.056	ENSCLAG00000013419	XRN2	100	81.056	Chinchilla_lanigera
ENSACAG00000005565	XRN2	100	80.538	ENSCSAG00000011094	XRN2	100	80.538	Chlorocebus_sabaeus
ENSACAG00000005565	XRN2	67	94.086	ENSCHOG00000013404	XRN2	69	94.086	Choloepus_hoffmanni
ENSACAG00000005565	XRN2	100	87.097	ENSCPBG00000023533	XRN2	99	88.663	Chrysemys_picta_bellii
ENSACAG00000005565	XRN2	85	58.353	ENSCING00000022336	-	100	58.950	Ciona_intestinalis
ENSACAG00000005565	XRN2	86	57.041	ENSCSAVG00000011217	-	100	59.357	Ciona_savignyi
ENSACAG00000005565	XRN2	100	80.538	ENSCANG00000040240	XRN2	100	80.538	Colobus_angolensis_palliatus
ENSACAG00000005565	XRN2	98	79.936	ENSCGRG00001010676	Xrn2	99	80.467	Cricetulus_griseus_chok1gshd
ENSACAG00000005565	XRN2	97	80.467	ENSCGRG00000006378	Xrn2	99	80.998	Cricetulus_griseus_crigri
ENSACAG00000005565	XRN2	53	71.150	ENSCSEG00000005628	xrn2	100	71.150	Cynoglossus_semilaevis
ENSACAG00000005565	XRN2	90	71.737	ENSCVAG00000018999	xrn2	98	76.996	Cyprinodon_variegatus
ENSACAG00000005565	XRN2	100	69.725	ENSDARG00000101900	xrn2	96	75.954	Danio_rerio
ENSACAG00000005565	XRN2	100	80.642	ENSDNOG00000001895	XRN2	100	80.642	Dasypus_novemcinctus
ENSACAG00000005565	XRN2	100	79.626	ENSDORG00000005434	Xrn2	100	79.626	Dipodomys_ordii
ENSACAG00000005565	XRN2	86	54.733	FBgn0031868	Rat1	91	53.464	Drosophila_melanogaster
ENSACAG00000005565	XRN2	100	71.384	ENSETEG00000001740	XRN2	100	71.384	Echinops_telfairi
ENSACAG00000005565	XRN2	84	68.319	ENSEBUG00000016136	xrn2	99	70.775	Eptatretus_burgeri
ENSACAG00000005565	XRN2	100	80.331	ENSEASG00005002484	XRN2	100	80.331	Equus_asinus_asinus
ENSACAG00000005565	XRN2	99	80.478	ENSECAG00000018988	XRN2	100	79.124	Equus_caballus
ENSACAG00000005565	XRN2	78	77.377	ENSEEUG00000009265	XRN2	78	77.377	Erinaceus_europaeus
ENSACAG00000005565	XRN2	100	69.939	ENSELUG00000000552	xrn2	100	70.948	Esox_lucius
ENSACAG00000005565	XRN2	100	80.745	ENSFCAG00000007970	XRN2	100	80.745	Felis_catus
ENSACAG00000005565	XRN2	100	82.536	ENSFALG00000004508	XRN2	100	82.536	Ficedula_albicollis
ENSACAG00000005565	XRN2	100	80.642	ENSFDAG00000016311	XRN2	100	80.642	Fukomys_damarensis
ENSACAG00000005565	XRN2	53	69.333	ENSFHEG00000013039	xrn2	98	69.333	Fundulus_heteroclitus
ENSACAG00000005565	XRN2	86	73.245	ENSGMOG00000013436	xrn2	100	73.245	Gadus_morhua
ENSACAG00000005565	XRN2	100	82.762	ENSGALG00000008372	XRN2	100	82.762	Gallus_gallus
ENSACAG00000005565	XRN2	90	73.913	ENSGAFG00000014284	xrn2	99	73.744	Gambusia_affinis
ENSACAG00000005565	XRN2	87	74.341	ENSGACG00000011870	xrn2	99	74.341	Gasterosteus_aculeatus
ENSACAG00000005565	XRN2	100	87.097	ENSGAGG00000004884	XRN2	100	87.097	Gopherus_agassizii
ENSACAG00000005565	XRN2	100	80.538	ENSGGOG00000013738	XRN2	100	80.538	Gorilla_gorilla
ENSACAG00000005565	XRN2	54	73.282	ENSHBUG00000005077	xrn2	77	98.667	Haplochromis_burtoni
ENSACAG00000005565	XRN2	100	79.814	ENSHGLG00000014831	XRN2	100	79.585	Heterocephalus_glaber_female
ENSACAG00000005565	XRN2	100	79.814	ENSHGLG00100013130	XRN2	100	79.585	Heterocephalus_glaber_male
ENSACAG00000005565	XRN2	90	73.769	ENSHCOG00000011994	xrn2	99	68.490	Hippocampus_comes
ENSACAG00000005565	XRN2	100	69.270	ENSIPUG00000006639	xrn2	100	69.270	Ictalurus_punctatus
ENSACAG00000005565	XRN2	100	80.642	ENSSTOG00000000589	XRN2	100	80.642	Ictidomys_tridecemlineatus
ENSACAG00000005565	XRN2	100	80.124	ENSJJAG00000022128	Xrn2	100	80.124	Jaculus_jaculus
ENSACAG00000005565	XRN2	53	79.029	ENSLBEG00000010041	xrn2	100	79.029	Labrus_bergylta
ENSACAG00000005565	XRN2	94	77.017	ENSLACG00000008307	XRN2	97	82.022	Latimeria_chalumnae
ENSACAG00000005565	XRN2	99	70.509	ENSLOCG00000016874	xrn2	100	70.509	Lepisosteus_oculatus
ENSACAG00000005565	XRN2	100	80.228	ENSLAFG00000014624	XRN2	100	80.228	Loxodonta_africana
ENSACAG00000005565	XRN2	100	80.538	ENSMFAG00000038122	XRN2	100	80.538	Macaca_fascicularis
ENSACAG00000005565	XRN2	100	80.538	ENSMMUG00000011405	XRN2	100	80.538	Macaca_mulatta
ENSACAG00000005565	XRN2	100	80.642	ENSMNEG00000040626	XRN2	100	80.642	Macaca_nemestrina
ENSACAG00000005565	XRN2	100	80.538	ENSMLEG00000041897	XRN2	100	80.538	Mandrillus_leucophaeus
ENSACAG00000005565	XRN2	96	72.216	ENSMAMG00000008633	xrn2	99	70.546	Mastacembelus_armatus
ENSACAG00000005565	XRN2	89	75.723	ENSMZEG00005022362	xrn2	96	75.723	Maylandia_zebra
ENSACAG00000005565	XRN2	99	81.405	ENSMGAG00000003196	XRN2	99	81.405	Meleagris_gallopavo
ENSACAG00000005565	XRN2	100	80.435	ENSMAUG00000021842	Xrn2	100	80.435	Mesocricetus_auratus
ENSACAG00000005565	XRN2	100	80.228	ENSMICG00000008126	XRN2	100	80.228	Microcebus_murinus
ENSACAG00000005565	XRN2	100	79.503	ENSMOCG00000012588	Xrn2	100	80.021	Microtus_ochrogaster
ENSACAG00000005565	XRN2	90	73.583	ENSMMOG00000017576	xrn2	97	73.583	Mola_mola
ENSACAG00000005565	XRN2	100	81.478	ENSMODG00000006163	XRN2	100	81.478	Monodelphis_domestica
ENSACAG00000005565	XRN2	91	72.921	ENSMALG00000011355	xrn2	99	72.921	Monopterus_albus
ENSACAG00000005565	XRN2	100	79.938	MGP_CAROLIEiJ_G0024400	Xrn2	100	79.938	Mus_caroli
ENSACAG00000005565	XRN2	100	80.042	ENSMUSG00000027433	Xrn2	100	80.042	Mus_musculus
ENSACAG00000005565	XRN2	100	79.834	MGP_PahariEiJ_G0025843	Xrn2	100	79.834	Mus_pahari
ENSACAG00000005565	XRN2	100	80.042	MGP_SPRETEiJ_G0025318	Xrn2	94	90.984	Mus_spretus
ENSACAG00000005565	XRN2	100	79.349	ENSMPUG00000001198	XRN2	93	79.349	Mustela_putorius_furo
ENSACAG00000005565	XRN2	100	80.642	ENSMLUG00000001536	XRN2	100	80.642	Myotis_lucifugus
ENSACAG00000005565	XRN2	100	80.952	ENSNGAG00000018138	Xrn2	100	80.952	Nannospalax_galili
ENSACAG00000005565	XRN2	89	75.838	ENSNBRG00000008062	xrn2	77	98.667	Neolamprologus_brichardi
ENSACAG00000005565	XRN2	100	80.435	ENSNLEG00000009991	XRN2	100	80.435	Nomascus_leucogenys
ENSACAG00000005565	XRN2	66	88.889	ENSMEUG00000008622	-	67	88.889	Notamacropus_eugenii
ENSACAG00000005565	XRN2	75	76.963	ENSOPRG00000001397	-	76	76.963	Ochotona_princeps
ENSACAG00000005565	XRN2	97	73.774	ENSODEG00000000860	-	99	73.319	Octodon_degus
ENSACAG00000005565	XRN2	100	80.642	ENSODEG00000010745	-	100	80.642	Octodon_degus
ENSACAG00000005565	XRN2	100	70.709	ENSONIG00000018720	xrn2	100	71.282	Oreochromis_niloticus
ENSACAG00000005565	XRN2	100	81.648	ENSOANG00000015673	XRN2	100	81.648	Ornithorhynchus_anatinus
ENSACAG00000005565	XRN2	100	80.745	ENSOCUG00000013468	XRN2	100	80.745	Oryctolagus_cuniculus
ENSACAG00000005565	XRN2	100	70.183	ENSORLG00000017213	xrn2	96	75.635	Oryzias_latipes
ENSACAG00000005565	XRN2	100	70.183	ENSORLG00020001824	xrn2	100	70.487	Oryzias_latipes_hni
ENSACAG00000005565	XRN2	100	70.010	ENSORLG00015019747	xrn2	100	70.314	Oryzias_latipes_hsok
ENSACAG00000005565	XRN2	89	75.173	ENSOMEG00000019820	xrn2	100	70.101	Oryzias_melastigma
ENSACAG00000005565	XRN2	100	79.814	ENSOGAG00000001068	XRN2	100	79.814	Otolemur_garnettii
ENSACAG00000005565	XRN2	97	81.702	ENSOARG00000004443	XRN2	100	81.702	Ovis_aries
ENSACAG00000005565	XRN2	100	80.538	ENSPPAG00000033549	XRN2	100	80.538	Pan_paniscus
ENSACAG00000005565	XRN2	100	80.745	ENSPPRG00000008732	XRN2	100	80.745	Panthera_pardus
ENSACAG00000005565	XRN2	97	82.128	ENSPTIG00000015683	XRN2	97	82.128	Panthera_tigris_altaica
ENSACAG00000005565	XRN2	100	80.538	ENSPTRG00000013308	XRN2	100	80.538	Pan_troglodytes
ENSACAG00000005565	XRN2	100	80.538	ENSPANG00000018088	XRN2	100	80.538	Papio_anubis
ENSACAG00000005565	XRN2	100	70.630	ENSPKIG00000016889	xrn2	100	71.138	Paramormyrops_kingsleyae
ENSACAG00000005565	XRN2	80	90.755	ENSPSIG00000014666	XRN2	100	90.755	Pelodiscus_sinensis
ENSACAG00000005565	XRN2	100	79.400	ENSPEMG00000000111	Xrn2	100	79.400	Peromyscus_maniculatus_bairdii
ENSACAG00000005565	XRN2	100	69.570	ENSPFOG00000004182	xrn2	99	70.431	Poecilia_formosa
ENSACAG00000005565	XRN2	90	74.027	ENSPLAG00000007351	xrn2	97	73.858	Poecilia_latipinna
ENSACAG00000005565	XRN2	94	70.033	ENSPMEG00000011798	xrn2	99	70.486	Poecilia_mexicana
ENSACAG00000005565	XRN2	90	74.456	ENSPREG00000012452	xrn2	99	73.266	Poecilia_reticulata
ENSACAG00000005565	XRN2	100	80.124	ENSPPYG00000010755	XRN2	100	80.124	Pongo_abelii
ENSACAG00000005565	XRN2	100	75.517	ENSPCAG00000011191	XRN2	100	75.517	Procavia_capensis
ENSACAG00000005565	XRN2	100	73.499	ENSPCOG00000016468	XRN2	100	73.499	Propithecus_coquereli
ENSACAG00000005565	XRN2	93	70.578	ENSPVAG00000004596	XRN2	93	70.578	Pteropus_vampyrus
ENSACAG00000005565	XRN2	89	73.757	ENSPNYG00000001765	xrn2	96	73.757	Pundamilia_nyererei
ENSACAG00000005565	XRN2	100	70.142	ENSPNAG00000010956	xrn2	99	70.142	Pygocentrus_nattereri
ENSACAG00000005565	XRN2	100	79.896	ENSRNOG00000011785	Xrn2	100	80.415	Rattus_norvegicus
ENSACAG00000005565	XRN2	86	84.307	ENSRBIG00000036193	XRN2	100	84.307	Rhinopithecus_bieti
ENSACAG00000005565	XRN2	100	80.538	ENSRROG00000044400	XRN2	90	80.538	Rhinopithecus_roxellana
ENSACAG00000005565	XRN2	81	50.340	YOR048C	RAT1	70	51.932	Saccharomyces_cerevisiae
ENSACAG00000005565	XRN2	100	80.745	ENSSBOG00000021014	XRN2	100	80.745	Saimiri_boliviensis_boliviensis
ENSACAG00000005565	XRN2	100	70.961	ENSSFOG00015001091	xrn2	100	70.961	Scleropages_formosus
ENSACAG00000005565	XRN2	89	74.508	ENSSMAG00000007834	xrn2	100	69.084	Scophthalmus_maximus
ENSACAG00000005565	XRN2	89	73.303	ENSSDUG00000012802	xrn2	98	72.936	Seriola_dumerili
ENSACAG00000005565	XRN2	92	73.708	ENSSLDG00000021273	xrn2	99	73.708	Seriola_lalandi_dorsalis
ENSACAG00000005565	XRN2	74	81.081	ENSSARG00000005859	-	74	81.081	Sorex_araneus
ENSACAG00000005565	XRN2	98	82.253	ENSSPUG00000005485	XRN2	96	82.253	Sphenodon_punctatus
ENSACAG00000005565	XRN2	97	71.125	ENSSPAG00000016027	xrn2	99	69.857	Stegastes_partitus
ENSACAG00000005565	XRN2	100	79.710	ENSSSCG00000007109	XRN2	100	79.710	Sus_scrofa
ENSACAG00000005565	XRN2	100	81.120	ENSTGUG00000007535	XRN2	100	81.120	Taeniopygia_guttata
ENSACAG00000005565	XRN2	100	67.505	ENSTRUG00000015489	xrn2	100	67.706	Takifugu_rubripes
ENSACAG00000005565	XRN2	100	68.159	ENSTNIG00000010712	xrn2	100	68.159	Tetraodon_nigroviridis
ENSACAG00000005565	XRN2	100	79.814	ENSTBEG00000004119	XRN2	100	80.331	Tupaia_belangeri
ENSACAG00000005565	XRN2	93	84.946	ENSTTRG00000009087	XRN2	93	84.946	Tursiops_truncatus
ENSACAG00000005565	XRN2	100	81.056	ENSUAMG00000024634	XRN2	100	81.056	Ursus_americanus
ENSACAG00000005565	XRN2	97	82.340	ENSUMAG00000004012	XRN2	95	82.340	Ursus_maritimus
ENSACAG00000005565	XRN2	89	76.251	ENSVPAG00000010694	XRN2	91	76.251	Vicugna_pacos
ENSACAG00000005565	XRN2	100	80.849	ENSVVUG00000012178	XRN2	100	80.849	Vulpes_vulpes
ENSACAG00000005565	XRN2	100	73.602	ENSXETG00000023501	xrn2	100	73.602	Xenopus_tropicalis
ENSACAG00000005565	XRN2	100	69.057	ENSXMAG00000000242	xrn2	99	69.490	Xiphophorus_maculatus