EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000005660 (Gene tree)
Gene ID: 100560345
Gene Symbol: POLR1B
Alias: -
Full Name: DNA-directed RNA polymerase I subunit RPA2
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 11745 bases
Position: chrGL343437.1:16491-28235
Accession: 100560345
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000005636	RNA_pol_Rpb2_1	PF04563.15	5e-35	1	1
ENSACAP00000005636	RNA_pol_Rpb2_2	PF04561.14	9.4e-13	1	1
ENSACAP00000005636	RNA_pol_Rpb2_3	PF04565.16	3.4e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000005759	POLR1B-201	1827	XM_008120084	ENSACAP00000005636	587 (aa)	XP_008118291	L7MZN4

Gene Model

Click here to download ENSACAG00000005660's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000005660's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000005660	POLR1B	99	73.413	ENSG00000125630	POLR1B	100	67.544	Homo_sapiens
ENSACAG00000005660	POLR1B	99	69.640	ENSAPOG00000000931	polr1b	51	69.640	Acanthochromis_polyacanthus
ENSACAG00000005660	POLR1B	99	73.928	ENSAMEG00000010826	POLR1B	51	73.928	Ailuropoda_melanoleuca
ENSACAG00000005660	POLR1B	99	69.983	ENSACIG00000002290	polr1b	51	69.983	Amphilophus_citrinellus
ENSACAG00000005660	POLR1B	99	69.125	ENSAOCG00000004249	polr1b	51	69.125	Amphiprion_ocellaris
ENSACAG00000005660	POLR1B	99	69.125	ENSAPEG00000004971	polr1b	51	69.125	Amphiprion_percula
ENSACAG00000005660	POLR1B	99	69.297	ENSATEG00000010957	polr1b	51	69.297	Anabas_testudineus
ENSACAG00000005660	POLR1B	99	73.585	ENSANAG00000026201	POLR1B	50	73.585	Aotus_nancymaae
ENSACAG00000005660	POLR1B	99	70.326	ENSACLG00000019089	polr1b	51	70.326	Astatotilapia_calliptera
ENSACAG00000005660	POLR1B	99	68.664	ENSAMXG00000037818	polr1b	51	68.664	Astyanax_mexicanus
ENSACAG00000005660	POLR1B	99	74.957	ENSBTAG00000014166	POLR1B	51	74.957	Bos_taurus
ENSACAG00000005660	POLR1B	99	74.443	ENSCJAG00000016433	POLR1B	50	74.443	Callithrix_jacchus
ENSACAG00000005660	POLR1B	99	74.099	ENSCAFG00000007174	POLR1B	51	74.099	Canis_familiaris
ENSACAG00000005660	POLR1B	99	74.099	ENSCAFG00020017367	POLR1B	51	74.099	Canis_lupus_dingo
ENSACAG00000005660	POLR1B	99	74.957	ENSCHIG00000014527	POLR1B	51	74.957	Capra_hircus
ENSACAG00000005660	POLR1B	99	74.957	ENSTSYG00000003669	POLR1B	51	74.957	Carlito_syrichta
ENSACAG00000005660	POLR1B	99	71.698	ENSCPOG00000015744	POLR1B	51	71.698	Cavia_porcellus
ENSACAG00000005660	POLR1B	99	73.928	ENSCCAG00000035252	POLR1B	51	73.928	Cebus_capucinus
ENSACAG00000005660	POLR1B	99	73.585	ENSCATG00000037382	POLR1B	51	73.585	Cercocebus_atys
ENSACAG00000005660	POLR1B	99	73.242	ENSCLAG00000004899	POLR1B	51	73.242	Chinchilla_lanigera
ENSACAG00000005660	POLR1B	99	73.585	ENSCSAG00000016783	POLR1B	51	73.585	Chlorocebus_sabaeus
ENSACAG00000005660	POLR1B	94	76.951	ENSCPBG00000003962	POLR1B	79	75.492	Chrysemys_picta_bellii
ENSACAG00000005660	POLR1B	97	47.478	ENSCING00000003329	-	50	47.478	Ciona_intestinalis
ENSACAG00000005660	POLR1B	99	74.271	ENSCANG00000039531	POLR1B	51	74.271	Colobus_angolensis_palliatus
ENSACAG00000005660	POLR1B	99	72.899	ENSCGRG00001014254	Polr1b	51	72.899	Cricetulus_griseus_chok1gshd
ENSACAG00000005660	POLR1B	99	73.070	ENSCGRG00000017847	Polr1b	51	73.070	Cricetulus_griseus_crigri
ENSACAG00000005660	POLR1B	99	68.782	ENSCSEG00000008564	polr1b	51	68.782	Cynoglossus_semilaevis
ENSACAG00000005660	POLR1B	99	69.983	ENSCVAG00000005824	polr1b	51	69.983	Cyprinodon_variegatus
ENSACAG00000005660	POLR1B	98	67.647	ENSDARG00000077469	polr1b	51	67.647	Danio_rerio
ENSACAG00000005660	POLR1B	97	74.341	ENSDNOG00000017718	POLR1B	50	73.585	Dasypus_novemcinctus
ENSACAG00000005660	POLR1B	99	74.099	ENSDORG00000014309	Polr1b	51	74.099	Dipodomys_ordii
ENSACAG00000005660	POLR1B	95	39.115	FBgn0003278	RpI135	50	39.115	Drosophila_melanogaster
ENSACAG00000005660	POLR1B	99	73.756	ENSEASG00005006504	POLR1B	51	73.756	Equus_asinus_asinus
ENSACAG00000005660	POLR1B	99	73.756	ENSECAG00000010062	POLR1B	51	73.756	Equus_caballus
ENSACAG00000005660	POLR1B	99	69.297	ENSELUG00000019627	polr1b	51	69.297	Esox_lucius
ENSACAG00000005660	POLR1B	99	74.786	ENSFCAG00000008091	POLR1B	51	74.786	Felis_catus
ENSACAG00000005660	POLR1B	99	73.585	ENSFDAG00000020976	POLR1B	51	73.585	Fukomys_damarensis
ENSACAG00000005660	POLR1B	100	63.203	ENSFHEG00000000533	polr1b	55	63.203	Fundulus_heteroclitus
ENSACAG00000005660	POLR1B	99	61.235	ENSGMOG00000005847	polr1b	53	61.235	Gadus_morhua
ENSACAG00000005660	POLR1B	99	68.954	ENSGAFG00000001383	polr1b	51	68.954	Gambusia_affinis
ENSACAG00000005660	POLR1B	99	66.838	ENSGACG00000003012	polr1b	51	66.838	Gasterosteus_aculeatus
ENSACAG00000005660	POLR1B	99	73.585	ENSGGOG00000013494	POLR1B	51	73.585	Gorilla_gorilla
ENSACAG00000005660	POLR1B	99	70.326	ENSHBUG00000012650	polr1b	51	70.326	Haplochromis_burtoni
ENSACAG00000005660	POLR1B	99	73.242	ENSHGLG00000011497	POLR1B	51	73.242	Heterocephalus_glaber_female
ENSACAG00000005660	POLR1B	99	71.355	ENSHGLG00100009371	POLR1B	51	71.355	Heterocephalus_glaber_male
ENSACAG00000005660	POLR1B	99	62.607	ENSHCOG00000000709	polr1b	51	62.607	Hippocampus_comes
ENSACAG00000005660	POLR1B	99	68.954	ENSIPUG00000018216	polr1b	51	68.954	Ictalurus_punctatus
ENSACAG00000005660	POLR1B	99	73.288	ENSJJAG00000000143	Polr1b	53	73.288	Jaculus_jaculus
ENSACAG00000005660	POLR1B	99	67.925	ENSKMAG00000016037	polr1b	53	67.925	Kryptolebias_marmoratus
ENSACAG00000005660	POLR1B	99	64.322	ENSLBEG00000027396	polr1b	51	64.837	Labrus_bergylta
ENSACAG00000005660	POLR1B	99	73.413	ENSLACG00000009481	POLR1B	51	73.413	Latimeria_chalumnae
ENSACAG00000005660	POLR1B	98	73.921	ENSLOCG00000016558	polr1b	51	73.921	Lepisosteus_oculatus
ENSACAG00000005660	POLR1B	99	73.540	ENSLAFG00000007659	POLR1B	51	73.540	Loxodonta_africana
ENSACAG00000005660	POLR1B	99	73.756	ENSMFAG00000032912	POLR1B	51	73.756	Macaca_fascicularis
ENSACAG00000005660	POLR1B	99	73.756	ENSMMUG00000009468	POLR1B	51	73.756	Macaca_mulatta
ENSACAG00000005660	POLR1B	99	73.756	ENSMNEG00000036047	POLR1B	51	73.756	Macaca_nemestrina
ENSACAG00000005660	POLR1B	99	69.125	ENSMAMG00000013118	polr1b	51	69.125	Mastacembelus_armatus
ENSACAG00000005660	POLR1B	99	70.326	ENSMZEG00005011850	polr1b	51	70.326	Maylandia_zebra
ENSACAG00000005660	POLR1B	99	73.928	ENSMICG00000013245	POLR1B	51	73.928	Microcebus_murinus
ENSACAG00000005660	POLR1B	99	72.727	ENSMOCG00000005942	Polr1b	51	72.727	Microtus_ochrogaster
ENSACAG00000005660	POLR1B	99	68.664	ENSMMOG00000008388	polr1b	51	68.664	Mola_mola
ENSACAG00000005660	POLR1B	99	74.271	ENSMODG00000006573	POLR1B	51	74.271	Monodelphis_domestica
ENSACAG00000005660	POLR1B	99	65.695	ENSMALG00000008958	polr1b	50	65.695	Monopterus_albus
ENSACAG00000005660	POLR1B	90	72.053	MGP_CAROLIEiJ_G0024281	Polr1b	75	72.328	Mus_caroli
ENSACAG00000005660	POLR1B	99	70.840	ENSMUSG00000027395	Polr1b	77	70.840	Mus_musculus
ENSACAG00000005660	POLR1B	99	71.355	MGP_PahariEiJ_G0025726	Polr1b	77	71.355	Mus_pahari
ENSACAG00000005660	POLR1B	99	70.840	MGP_SPRETEiJ_G0025201	Polr1b	77	70.840	Mus_spretus
ENSACAG00000005660	POLR1B	99	73.630	ENSMPUG00000009644	POLR1B	52	73.630	Mustela_putorius_furo
ENSACAG00000005660	POLR1B	99	74.271	ENSMLUG00000004910	POLR1B	51	74.271	Myotis_lucifugus
ENSACAG00000005660	POLR1B	99	73.413	ENSNGAG00000021472	Polr1b	52	73.368	Nannospalax_galili
ENSACAG00000005660	POLR1B	99	70.154	ENSNBRG00000017979	polr1b	51	70.154	Neolamprologus_brichardi
ENSACAG00000005660	POLR1B	99	74.443	ENSOPRG00000012742	POLR1B	51	74.443	Ochotona_princeps
ENSACAG00000005660	POLR1B	99	72.650	ENSODEG00000005501	POLR1B	54	72.650	Octodon_degus
ENSACAG00000005660	POLR1B	99	70.497	ENSONIG00000010382	polr1b	51	70.497	Oreochromis_niloticus
ENSACAG00000005660	POLR1B	99	75.129	ENSOCUG00000006058	POLR1B	51	75.129	Oryctolagus_cuniculus
ENSACAG00000005660	POLR1B	99	68.322	ENSORLG00000000890	polr1b	51	68.322	Oryzias_latipes
ENSACAG00000005660	POLR1B	99	68.322	ENSORLG00015011105	polr1b	51	68.322	Oryzias_latipes_hsok
ENSACAG00000005660	POLR1B	99	67.637	ENSOMEG00000005073	polr1b	77	67.466	Oryzias_melastigma
ENSACAG00000005660	POLR1B	99	74.786	ENSOGAG00000007367	POLR1B	50	74.786	Otolemur_garnettii
ENSACAG00000005660	POLR1B	99	75.000	ENSOARG00000020904	POLR1B	51	75.000	Ovis_aries
ENSACAG00000005660	POLR1B	99	73.585	ENSPPAG00000002774	POLR1B	57	73.585	Pan_paniscus
ENSACAG00000005660	POLR1B	99	74.786	ENSPPRG00000005760	POLR1B	50	74.786	Panthera_pardus
ENSACAG00000005660	POLR1B	99	74.786	ENSPTIG00000013496	POLR1B	51	74.786	Panthera_tigris_altaica
ENSACAG00000005660	POLR1B	99	73.585	ENSPTRG00000012366	POLR1B	51	73.585	Pan_troglodytes
ENSACAG00000005660	POLR1B	99	73.585	ENSPANG00000023423	POLR1B	50	73.585	Papio_anubis
ENSACAG00000005660	POLR1B	99	68.954	ENSPKIG00000007536	polr1b	51	68.954	Paramormyrops_kingsleyae
ENSACAG00000005660	POLR1B	99	69.297	ENSPMGG00000021622	polr1b	51	69.297	Periophthalmus_magnuspinnatus
ENSACAG00000005660	POLR1B	99	72.556	ENSPEMG00000008619	Polr1b	80	72.556	Peromyscus_maniculatus_bairdii
ENSACAG00000005660	POLR1B	99	69.297	ENSPFOG00000010484	polr1b	51	69.297	Poecilia_formosa
ENSACAG00000005660	POLR1B	99	69.297	ENSPLAG00000007518	polr1b	51	69.297	Poecilia_latipinna
ENSACAG00000005660	POLR1B	99	69.468	ENSPMEG00000006810	polr1b	51	69.468	Poecilia_mexicana
ENSACAG00000005660	POLR1B	99	69.297	ENSPREG00000002867	polr1b	51	69.297	Poecilia_reticulata
ENSACAG00000005660	POLR1B	99	73.070	ENSPPYG00000012168	POLR1B	51	73.070	Pongo_abelii
ENSACAG00000005660	POLR1B	99	63.699	ENSPCAG00000013293	POLR1B	51	63.699	Procavia_capensis
ENSACAG00000005660	POLR1B	99	70.326	ENSPNYG00000004767	polr1b	51	70.326	Pundamilia_nyererei
ENSACAG00000005660	POLR1B	99	72.384	ENSRNOG00000018349	Polr1b	51	72.384	Rattus_norvegicus
ENSACAG00000005660	POLR1B	99	73.242	ENSRBIG00000019757	POLR1B	51	73.242	Rhinopithecus_bieti
ENSACAG00000005660	POLR1B	99	73.756	ENSSBOG00000024562	POLR1B	51	73.756	Saimiri_boliviensis_boliviensis
ENSACAG00000005660	POLR1B	60	75.921	ENSSHAG00000017013	-	100	75.921	Sarcophilus_harrisii
ENSACAG00000005660	POLR1B	99	63.697	ENSSFOG00015004632	polr1b	52	63.697	Scleropages_formosus
ENSACAG00000005660	POLR1B	99	68.611	ENSSMAG00000013682	polr1b	51	68.611	Scophthalmus_maximus
ENSACAG00000005660	POLR1B	99	69.983	ENSSDUG00000019471	polr1b	52	69.983	Seriola_dumerili
ENSACAG00000005660	POLR1B	59	63.359	ENSSLDG00000015398	POLR1B	76	63.359	Seriola_lalandi_dorsalis
ENSACAG00000005660	POLR1B	99	69.811	ENSSPAG00000006345	polr1b	51	69.811	Stegastes_partitus
ENSACAG00000005660	POLR1B	99	74.099	ENSSSCG00000008098	POLR1B	54	73.928	Sus_scrofa
ENSACAG00000005660	POLR1B	99	68.439	ENSTRUG00000006581	polr1b	82	68.439	Takifugu_rubripes
ENSACAG00000005660	POLR1B	99	68.158	ENSTNIG00000002722	polr1b	51	68.158	Tetraodon_nigroviridis
ENSACAG00000005660	POLR1B	99	74.099	ENSTTRG00000010988	POLR1B	51	74.099	Tursiops_truncatus
ENSACAG00000005660	POLR1B	99	74.099	ENSUMAG00000008619	POLR1B	51	74.099	Ursus_maritimus
ENSACAG00000005660	POLR1B	99	74.271	ENSVVUG00000028670	POLR1B	51	74.271	Vulpes_vulpes
ENSACAG00000005660	POLR1B	99	68.439	ENSXETG00000013749	polr1b	51	68.439	Xenopus_tropicalis
ENSACAG00000005660	POLR1B	99	68.268	ENSXCOG00000006080	polr1b	51	68.268	Xiphophorus_couchianus
ENSACAG00000005660	POLR1B	99	68.611	ENSXMAG00000007723	polr1b	51	68.611	Xiphophorus_maculatus