EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000005714 (Gene tree)
Gene ID: 100563473
Gene Symbol: PYM1
Alias: PYM|WIBG
Full Name: PYM homolog 1%2C exon junction complex associated factor
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 6478 bases
Position: chrGL343198.1:3211707-3218184
Accession: 100563473
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000005578	Mago-bind	PF09282.10	1.2e-13	1	1
ENSACAP00000020644	Mago-bind	PF09282.10	1.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000005700	PYM1-201	645	XM_003223197	ENSACAP00000005578	214 (aa)	XP_003223245	H9GAH4
ENSACAT00000026673	PYM1-202	651	-	ENSACAP00000020644	216 (aa)	-	H9GUD7

Gene Model

Click here to download ENSACAG00000005714's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03013	RNA transport	KEGG
acs03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000005714's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000005714	PYM1	94	67.980	ENSG00000170473	PYM1	94	67.980	Homo_sapiens
ENSACAG00000005714	PYM1	99	55.455	ENSAPOG00000023045	pym1	94	57.416	Acanthochromis_polyacanthus
ENSACAG00000005714	PYM1	93	63.861	ENSAMEG00000003091	PYM1	93	64.322	Ailuropoda_melanoleuca
ENSACAG00000005714	PYM1	99	60.987	ENSACIG00000012769	pym1	94	61.792	Amphilophus_citrinellus
ENSACAG00000005714	PYM1	99	57.991	ENSAOCG00000021358	pym1	94	59.135	Amphiprion_ocellaris
ENSACAG00000005714	PYM1	99	57.991	ENSAPEG00000022679	pym1	94	59.135	Amphiprion_percula
ENSACAG00000005714	PYM1	99	57.143	ENSATEG00000024022	pym1	94	57.692	Anabas_testudineus
ENSACAG00000005714	PYM1	94	67.488	ENSANAG00000036967	PYM1	94	67.488	Aotus_nancymaae
ENSACAG00000005714	PYM1	100	55.000	ENSAMXG00000007650	pym1	94	57.692	Astyanax_mexicanus
ENSACAG00000005714	PYM1	94	69.268	ENSBTAG00000031146	PYM1	94	69.268	Bos_taurus
ENSACAG00000005714	PYM1	94	67.980	ENSCJAG00000041077	PYM1	94	67.980	Callithrix_jacchus
ENSACAG00000005714	PYM1	94	70.732	ENSCAFG00000000076	PYM1	94	70.732	Canis_familiaris
ENSACAG00000005714	PYM1	94	70.732	ENSCAFG00020026099	PYM1	94	70.732	Canis_lupus_dingo
ENSACAG00000005714	PYM1	94	69.268	ENSCHIG00000026207	PYM1	94	69.268	Capra_hircus
ENSACAG00000005714	PYM1	94	66.010	ENSTSYG00000000787	PYM1	94	66.010	Carlito_syrichta
ENSACAG00000005714	PYM1	89	65.969	ENSCAPG00000010374	PYM1	94	65.969	Cavia_aperea
ENSACAG00000005714	PYM1	94	67.488	ENSCPOG00000031546	PYM1	94	67.488	Cavia_porcellus
ENSACAG00000005714	PYM1	94	67.980	ENSCCAG00000026187	PYM1	94	67.980	Cebus_capucinus
ENSACAG00000005714	PYM1	94	69.756	ENSCATG00000018801	PYM1	94	69.756	Cercocebus_atys
ENSACAG00000005714	PYM1	94	66.010	ENSCLAG00000007964	PYM1	94	65.517	Chinchilla_lanigera
ENSACAG00000005714	PYM1	90	68.557	ENSCSAG00000005291	PYM1	93	68.205	Chlorocebus_sabaeus
ENSACAG00000005714	PYM1	98	41.935	ENSCING00000006448	-	94	43.269	Ciona_intestinalis
ENSACAG00000005714	PYM1	98	37.872	ENSCSAVG00000009805	-	89	40.952	Ciona_savignyi
ENSACAG00000005714	PYM1	98	63.208	ENSCANG00000019757	-	86	66.667	Colobus_angolensis_palliatus
ENSACAG00000005714	PYM1	94	69.756	ENSCANG00000020338	-	94	69.756	Colobus_angolensis_palliatus
ENSACAG00000005714	PYM1	94	65.517	ENSCGRG00001018051	-	94	66.995	Cricetulus_griseus_chok1gshd
ENSACAG00000005714	PYM1	90	58.333	ENSCGRG00001004231	-	88	58.854	Cricetulus_griseus_chok1gshd
ENSACAG00000005714	PYM1	90	58.333	ENSCGRG00000018933	-	88	58.854	Cricetulus_griseus_crigri
ENSACAG00000005714	PYM1	94	65.517	ENSCGRG00000012495	-	94	66.995	Cricetulus_griseus_crigri
ENSACAG00000005714	PYM1	94	58.373	ENSCSEG00000021531	pym1	94	58.373	Cynoglossus_semilaevis
ENSACAG00000005714	PYM1	98	57.674	ENSCVAG00000017360	pym1	83	57.353	Cyprinodon_variegatus
ENSACAG00000005714	PYM1	99	54.976	ENSDARG00000046024	pym1	94	52.970	Danio_rerio
ENSACAG00000005714	PYM1	94	66.995	ENSDNOG00000048414	PYM1	86	66.995	Dasypus_novemcinctus
ENSACAG00000005714	PYM1	94	67.980	ENSDORG00000029448	Pym1	94	67.980	Dipodomys_ordii
ENSACAG00000005714	PYM1	99	32.301	FBgn0034918	Pym	92	31.674	Drosophila_melanogaster
ENSACAG00000005714	PYM1	90	64.062	ENSETEG00000004461	-	94	64.062	Echinops_telfairi
ENSACAG00000005714	PYM1	89	66.842	ENSEASG00005002271	PYM1	81	66.842	Equus_asinus_asinus
ENSACAG00000005714	PYM1	94	68.932	ENSECAG00000011870	PYM1	94	68.932	Equus_caballus
ENSACAG00000005714	PYM1	96	58.454	ENSELUG00000024250	pym1	94	61.275	Esox_lucius
ENSACAG00000005714	PYM1	94	68.966	ENSFCAG00000013967	PYM1	94	68.966	Felis_catus
ENSACAG00000005714	PYM1	94	71.078	ENSFDAG00000006314	PYM1	94	71.078	Fukomys_damarensis
ENSACAG00000005714	PYM1	94	62.981	ENSFHEG00000005884	pym1	94	62.981	Fundulus_heteroclitus
ENSACAG00000005714	PYM1	94	55.122	ENSGMOG00000007239	pym1	93	56.650	Gadus_morhua
ENSACAG00000005714	PYM1	94	74.257	ENSGALG00000046169	PYM1	94	74.257	Gallus_gallus
ENSACAG00000005714	PYM1	99	60.000	ENSGAFG00000003280	pym1	93	60.194	Gambusia_affinis
ENSACAG00000005714	PYM1	99	54.502	ENSGACG00000010703	pym1	94	54.455	Gasterosteus_aculeatus
ENSACAG00000005714	PYM1	90	73.604	ENSGAGG00000001973	PYM1	85	73.604	Gopherus_agassizii
ENSACAG00000005714	PYM1	94	69.756	ENSGGOG00000043246	PYM1	94	69.756	Gorilla_gorilla
ENSACAG00000005714	PYM1	94	61.722	ENSHBUG00000012719	pym1	94	62.679	Haplochromis_burtoni
ENSACAG00000005714	PYM1	94	68.473	ENSHGLG00000017155	PYM1	94	68.473	Heterocephalus_glaber_female
ENSACAG00000005714	PYM1	94	68.473	ENSHGLG00100015341	PYM1	94	68.473	Heterocephalus_glaber_male
ENSACAG00000005714	PYM1	99	57.273	ENSHCOG00000007987	pym1	81	57.143	Hippocampus_comes
ENSACAG00000005714	PYM1	100	55.605	ENSIPUG00000005975	wibga	94	52.607	Ictalurus_punctatus
ENSACAG00000005714	PYM1	94	68.473	ENSSTOG00000014206	PYM1	94	68.473	Ictidomys_tridecemlineatus
ENSACAG00000005714	PYM1	94	66.029	ENSJJAG00000013338	Pym1	94	66.029	Jaculus_jaculus
ENSACAG00000005714	PYM1	100	56.637	ENSKMAG00000006351	pym1	95	56.542	Kryptolebias_marmoratus
ENSACAG00000005714	PYM1	99	60.930	ENSLBEG00000015707	pym1	93	61.194	Labrus_bergylta
ENSACAG00000005714	PYM1	90	63.000	ENSLACG00000014398	PYM1	90	63.000	Latimeria_chalumnae
ENSACAG00000005714	PYM1	94	69.458	ENSLAFG00000002369	PYM1	94	69.458	Loxodonta_africana
ENSACAG00000005714	PYM1	94	69.756	ENSMFAG00000003048	PYM1	94	69.756	Macaca_fascicularis
ENSACAG00000005714	PYM1	94	69.756	ENSMMUG00000011002	PYM1	94	69.756	Macaca_mulatta
ENSACAG00000005714	PYM1	94	69.756	ENSMNEG00000034677	PYM1	94	69.756	Macaca_nemestrina
ENSACAG00000005714	PYM1	94	69.756	ENSMLEG00000007971	PYM1	94	69.756	Mandrillus_leucophaeus
ENSACAG00000005714	PYM1	99	61.187	ENSMAMG00000001588	pym1	94	61.905	Mastacembelus_armatus
ENSACAG00000005714	PYM1	94	61.244	ENSMZEG00005026458	pym1	94	62.201	Maylandia_zebra
ENSACAG00000005714	PYM1	94	66.502	ENSMAUG00000007318	Pym1	94	66.995	Mesocricetus_auratus
ENSACAG00000005714	PYM1	94	66.990	ENSMICG00000032962	PYM1	94	66.990	Microcebus_murinus
ENSACAG00000005714	PYM1	94	67.980	ENSMOCG00000010208	Pym1	94	67.980	Microtus_ochrogaster
ENSACAG00000005714	PYM1	99	54.630	ENSMMOG00000009301	pym1	92	61.576	Mola_mola
ENSACAG00000005714	PYM1	99	56.881	ENSMALG00000013496	pym1	94	61.353	Monopterus_albus
ENSACAG00000005714	PYM1	94	66.502	MGP_CAROLIEiJ_G0015953	Pym1	94	66.502	Mus_caroli
ENSACAG00000005714	PYM1	94	66.502	ENSMUSG00000064030	Pym1	94	66.010	Mus_musculus
ENSACAG00000005714	PYM1	94	68.473	MGP_PahariEiJ_G0031131	Pym1	94	68.473	Mus_pahari
ENSACAG00000005714	PYM1	94	66.010	MGP_SPRETEiJ_G0016778	Pym1	94	66.010	Mus_spretus
ENSACAG00000005714	PYM1	94	68.473	ENSMPUG00000000931	PYM1	94	68.473	Mustela_putorius_furo
ENSACAG00000005714	PYM1	94	61.881	ENSMLUG00000003586	PYM1	94	61.881	Myotis_lucifugus
ENSACAG00000005714	PYM1	90	65.979	ENSNGAG00000019207	Pym1	88	65.979	Nannospalax_galili
ENSACAG00000005714	PYM1	99	62.273	ENSNBRG00000006951	pym1	94	62.679	Neolamprologus_brichardi
ENSACAG00000005714	PYM1	94	67.980	ENSNLEG00000017588	PYM1	94	67.980	Nomascus_leucogenys
ENSACAG00000005714	PYM1	89	61.780	ENSMEUG00000001017	PYM1	93	61.376	Notamacropus_eugenii
ENSACAG00000005714	PYM1	93	64.141	ENSOPRG00000007797	PYM1	91	64.141	Ochotona_princeps
ENSACAG00000005714	PYM1	94	69.756	ENSODEG00000004289	PYM1	94	69.756	Octodon_degus
ENSACAG00000005714	PYM1	94	58.491	ENSONIG00000016740	pym1	93	60.287	Oreochromis_niloticus
ENSACAG00000005714	PYM1	90	67.526	ENSOCUG00000025969	PYM1	81	67.526	Oryctolagus_cuniculus
ENSACAG00000005714	PYM1	99	61.574	ENSORLG00000030592	pym1	94	60.976	Oryzias_latipes
ENSACAG00000005714	PYM1	99	58.257	ENSORLG00020011264	pym1	94	60.870	Oryzias_latipes_hni
ENSACAG00000005714	PYM1	99	62.326	ENSORLG00015005287	pym1	94	61.765	Oryzias_latipes_hsok
ENSACAG00000005714	PYM1	99	57.727	ENSOMEG00000022250	pym1	94	58.416	Oryzias_melastigma
ENSACAG00000005714	PYM1	90	67.708	ENSOGAG00000007038	PYM1	88	67.708	Otolemur_garnettii
ENSACAG00000005714	PYM1	94	69.268	ENSOARG00000010856	PYM1	94	69.268	Ovis_aries
ENSACAG00000005714	PYM1	94	67.980	ENSPPAG00000043630	PYM1	94	67.980	Pan_paniscus
ENSACAG00000005714	PYM1	94	68.966	ENSPPRG00000013243	PYM1	94	68.966	Panthera_pardus
ENSACAG00000005714	PYM1	94	69.458	ENSPTIG00000017380	PYM1	94	69.458	Panthera_tigris_altaica
ENSACAG00000005714	PYM1	94	67.980	ENSPTRG00000005067	PYM1	94	67.980	Pan_troglodytes
ENSACAG00000005714	PYM1	94	69.268	ENSPANG00000009562	PYM1	94	69.268	Papio_anubis
ENSACAG00000005714	PYM1	100	62.273	ENSPKIG00000006301	pym1	94	61.058	Paramormyrops_kingsleyae
ENSACAG00000005714	PYM1	94	70.813	ENSPSIG00000003043	PYM1	94	70.813	Pelodiscus_sinensis
ENSACAG00000005714	PYM1	100	61.290	ENSPMGG00000023161	pym1	94	60.976	Periophthalmus_magnuspinnatus
ENSACAG00000005714	PYM1	94	64.563	ENSPEMG00000009372	Pym1	94	66.019	Peromyscus_maniculatus_bairdii
ENSACAG00000005714	PYM1	89	63.351	ENSPCIG00000024658	PYM1	91	62.000	Phascolarctos_cinereus
ENSACAG00000005714	PYM1	99	62.273	ENSPFOG00000008193	pym1	93	62.621	Poecilia_formosa
ENSACAG00000005714	PYM1	99	62.273	ENSPLAG00000009228	pym1	93	62.621	Poecilia_latipinna
ENSACAG00000005714	PYM1	99	62.273	ENSPMEG00000001505	pym1	93	62.621	Poecilia_mexicana
ENSACAG00000005714	PYM1	91	67.857	ENSPPYG00000004635	PYM1	93	67.179	Pongo_abelii
ENSACAG00000005714	PYM1	94	67.788	ENSPCOG00000019706	PYM1	94	67.788	Propithecus_coquereli
ENSACAG00000005714	PYM1	91	65.979	ENSPVAG00000011437	PYM1	92	66.839	Pteropus_vampyrus
ENSACAG00000005714	PYM1	94	61.650	ENSPNYG00000012871	pym1	94	62.500	Pundamilia_nyererei
ENSACAG00000005714	PYM1	100	52.423	ENSPNAG00000018833	pym1	94	57.820	Pygocentrus_nattereri
ENSACAG00000005714	PYM1	94	51.961	ENSRNOG00000049415	AABR07055413.1	53	72.381	Rattus_norvegicus
ENSACAG00000005714	PYM1	94	63.682	ENSRNOG00000058130	Pym1	92	64.677	Rattus_norvegicus
ENSACAG00000005714	PYM1	94	65.366	ENSRBIG00000033362	PYM1	94	65.366	Rhinopithecus_bieti
ENSACAG00000005714	PYM1	94	69.756	ENSRROG00000043620	PYM1	94	69.756	Rhinopithecus_roxellana
ENSACAG00000005714	PYM1	94	67.980	ENSSBOG00000029393	PYM1	94	67.980	Saimiri_boliviensis_boliviensis
ENSACAG00000005714	PYM1	93	64.851	ENSSHAG00000008280	PYM1	93	64.851	Sarcophilus_harrisii
ENSACAG00000005714	PYM1	93	61.307	ENSSFOG00015021475	pym1	94	60.891	Scleropages_formosus
ENSACAG00000005714	PYM1	99	57.534	ENSSMAG00000020912	pym1	94	57.692	Scophthalmus_maximus
ENSACAG00000005714	PYM1	99	56.054	ENSSDUG00000001807	pym1	94	57.547	Seriola_dumerili
ENSACAG00000005714	PYM1	99	58.333	ENSSLDG00000013730	pym1	94	59.024	Seriola_lalandi_dorsalis
ENSACAG00000005714	PYM1	90	66.146	ENSSARG00000009569	PYM1	94	66.667	Sorex_araneus
ENSACAG00000005714	PYM1	97	70.192	ENSSPUG00000015059	PYM1	91	68.878	Sphenodon_punctatus
ENSACAG00000005714	PYM1	99	56.818	ENSSPAG00000020100	pym1	94	59.716	Stegastes_partitus
ENSACAG00000005714	PYM1	94	71.707	ENSSSCG00000040825	PYM1	94	71.707	Sus_scrofa
ENSACAG00000005714	PYM1	99	58.796	ENSTRUG00000021367	pym1	93	59.901	Takifugu_rubripes
ENSACAG00000005714	PYM1	99	49.554	ENSTNIG00000012534	pym1	92	54.717	Tetraodon_nigroviridis
ENSACAG00000005714	PYM1	90	64.433	ENSTBEG00000004208	PYM1	94	64.433	Tupaia_belangeri
ENSACAG00000005714	PYM1	90	68.394	ENSTTRG00000014971	PYM1	92	68.394	Tursiops_truncatus
ENSACAG00000005714	PYM1	94	66.502	ENSUAMG00000014521	PYM1	94	66.502	Ursus_americanus
ENSACAG00000005714	PYM1	94	61.951	ENSUMAG00000016241	PYM1	87	61.951	Ursus_maritimus
ENSACAG00000005714	PYM1	94	70.244	ENSVVUG00000022749	PYM1	94	70.244	Vulpes_vulpes
ENSACAG00000005714	PYM1	94	60.099	ENSXETG00000021850	pym1	94	62.069	Xenopus_tropicalis
ENSACAG00000005714	PYM1	99	61.187	ENSXMAG00000011649	pym1	93	61.463	Xiphophorus_maculatus