EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000006464 (Gene tree)
Gene ID: 100556779
Gene Symbol: PRPF6
Alias: ANT-1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|bB152O15.1|hPrp6
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 39505 bases
Position: chr4:155542418-155581922
Accession: 100556779
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000006435	PRP1_N	PF06424.12	1.2e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000006580	PRPF6-201	3519	XM_003220687	ENSACAP00000006435	988 (aa)	XP_003220735	G1KFI2

Gene Model

Click here to download ENSACAG00000006464's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000006464's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000006464	PRPF6	95	97.024	ENSG00000101161	PRPF6	100	97.024	Homo_sapiens
ENSACAG00000006464	PRPF6	95	92.349	ENSAPOG00000010395	prpf6	96	92.774	Acanthochromis_polyacanthus
ENSACAG00000006464	PRPF6	96	96.617	ENSAMEG00000001916	PRPF6	99	96.617	Ailuropoda_melanoleuca
ENSACAG00000006464	PRPF6	95	92.455	ENSACIG00000019862	prpf6	96	92.880	Amphilophus_citrinellus
ENSACAG00000006464	PRPF6	95	92.455	ENSAOCG00000012988	prpf6	96	92.880	Amphiprion_ocellaris
ENSACAG00000006464	PRPF6	95	85.972	ENSAPEG00000008301	prpf6	100	86.504	Amphiprion_percula
ENSACAG00000006464	PRPF6	95	91.923	ENSATEG00000005581	prpf6	96	92.349	Anabas_testudineus
ENSACAG00000006464	PRPF6	95	97.131	ENSANAG00000012661	PRPF6	100	97.762	Aotus_nancymaae
ENSACAG00000006464	PRPF6	95	92.455	ENSACLG00000025875	prpf6	96	92.880	Astatotilapia_calliptera
ENSACAG00000006464	PRPF6	96	92.275	ENSAMXG00000001929	prpf6	96	92.698	Astyanax_mexicanus
ENSACAG00000006464	PRPF6	95	97.662	ENSBTAG00000011656	PRPF6	100	97.662	Bos_taurus
ENSACAG00000006464	PRPF6	95	97.131	ENSCJAG00000010616	PRPF6	100	97.131	Callithrix_jacchus
ENSACAG00000006464	PRPF6	95	98.087	ENSCAFG00000013165	PRPF6	100	98.087	Canis_familiaris
ENSACAG00000006464	PRPF6	95	98.087	ENSCAFG00020002050	PRPF6	100	98.087	Canis_lupus_dingo
ENSACAG00000006464	PRPF6	95	97.662	ENSCHIG00000018187	PRPF6	100	97.662	Capra_hircus
ENSACAG00000006464	PRPF6	95	97.981	ENSTSYG00000007814	PRPF6	100	97.981	Carlito_syrichta
ENSACAG00000006464	PRPF6	93	96.838	ENSCAPG00000015077	PRPF6	100	96.838	Cavia_aperea
ENSACAG00000006464	PRPF6	95	98.087	ENSCPOG00000007518	PRPF6	100	98.087	Cavia_porcellus
ENSACAG00000006464	PRPF6	95	93.730	ENSCCAG00000024564	PRPF6	100	93.730	Cebus_capucinus
ENSACAG00000006464	PRPF6	95	97.131	ENSCATG00000037473	PRPF6	100	97.131	Cercocebus_atys
ENSACAG00000006464	PRPF6	95	94.261	ENSCLAG00000003854	PRPF6	100	94.261	Chinchilla_lanigera
ENSACAG00000006464	PRPF6	95	92.080	ENSCSAG00000016742	PRPF6	100	92.080	Chlorocebus_sabaeus
ENSACAG00000006464	PRPF6	80	81.138	ENSCHOG00000003315	-	100	81.138	Choloepus_hoffmanni
ENSACAG00000006464	PRPF6	100	96.457	ENSCPBG00000013964	PRPF6	100	96.457	Chrysemys_picta_bellii
ENSACAG00000006464	PRPF6	96	73.326	ENSCING00000008817	-	99	73.326	Ciona_intestinalis
ENSACAG00000006464	PRPF6	95	96.918	ENSCANG00000038230	PRPF6	100	96.918	Colobus_angolensis_palliatus
ENSACAG00000006464	PRPF6	95	98.087	ENSCGRG00001022666	Prpf6	100	98.087	Cricetulus_griseus_chok1gshd
ENSACAG00000006464	PRPF6	95	86.929	ENSCSEG00000018561	prpf6	100	87.354	Cynoglossus_semilaevis
ENSACAG00000006464	PRPF6	95	92.242	ENSCVAG00000010550	prpf6	96	92.667	Cyprinodon_variegatus
ENSACAG00000006464	PRPF6	99	89.796	ENSDARG00000091367	prpf6	99	92.202	Danio_rerio
ENSACAG00000006464	PRPF6	95	97.343	ENSDNOG00000040544	PRPF6	100	97.343	Dasypus_novemcinctus
ENSACAG00000006464	PRPF6	87	97.196	ENSDORG00000005406	Prpf6	100	97.196	Dipodomys_ordii
ENSACAG00000006464	PRPF6	96	71.595	FBgn0036828	CG6841	98	72.543	Drosophila_melanogaster
ENSACAG00000006464	PRPF6	81	94.883	ENSETEG00000004447	PRPF6	85	94.883	Echinops_telfairi
ENSACAG00000006464	PRPF6	96	87.144	ENSEBUG00000008835	prpf6	99	87.593	Eptatretus_burgeri
ENSACAG00000006464	PRPF6	97	96.343	ENSEASG00005023115	PRPF6	100	97.662	Equus_asinus_asinus
ENSACAG00000006464	PRPF6	95	93.411	ENSECAG00000013983	PRPF6	100	93.411	Equus_caballus
ENSACAG00000006464	PRPF6	86	95.833	ENSEEUG00000000180	PRPF6	81	95.833	Erinaceus_europaeus
ENSACAG00000006464	PRPF6	95	91.180	ENSELUG00000001945	prpf6	93	91.180	Esox_lucius
ENSACAG00000006464	PRPF6	95	97.981	ENSFCAG00000001183	PRPF6	100	97.981	Felis_catus
ENSACAG00000006464	PRPF6	98	89.637	ENSFALG00000006046	-	97	90.899	Ficedula_albicollis
ENSACAG00000006464	PRPF6	98	96.594	ENSFALG00000010326	-	100	96.594	Ficedula_albicollis
ENSACAG00000006464	PRPF6	95	96.706	ENSFDAG00000006451	PRPF6	100	98.073	Fukomys_damarensis
ENSACAG00000006464	PRPF6	95	93.305	ENSFHEG00000000560	prpf6	96	93.305	Fundulus_heteroclitus
ENSACAG00000006464	PRPF6	95	89.429	ENSGMOG00000015622	prpf6	99	89.429	Gadus_morhua
ENSACAG00000006464	PRPF6	95	98.725	ENSGALG00000006001	PRPF6	100	98.725	Gallus_gallus
ENSACAG00000006464	PRPF6	95	88.098	ENSGAFG00000021109	prpf6	96	88.523	Gambusia_affinis
ENSACAG00000006464	PRPF6	95	91.073	ENSGACG00000002576	prpf6	99	91.073	Gasterosteus_aculeatus
ENSACAG00000006464	PRPF6	100	96.255	ENSGAGG00000008653	PRPF6	100	96.255	Gopherus_agassizii
ENSACAG00000006464	PRPF6	95	97.024	ENSGGOG00000016876	PRPF6	100	97.024	Gorilla_gorilla
ENSACAG00000006464	PRPF6	95	92.455	ENSHBUG00000004496	prpf6	96	92.880	Haplochromis_burtoni
ENSACAG00000006464	PRPF6	95	97.981	ENSHGLG00000009222	PRPF6	100	97.981	Heterocephalus_glaber_female
ENSACAG00000006464	PRPF6	93	98.037	ENSHGLG00100016600	PRPF6	100	98.037	Heterocephalus_glaber_male
ENSACAG00000006464	PRPF6	95	91.286	ENSHCOG00000011513	prpf6	96	91.711	Hippocampus_comes
ENSACAG00000006464	PRPF6	98	92.228	ENSIPUG00000004912	prpf6	96	93.411	Ictalurus_punctatus
ENSACAG00000006464	PRPF6	95	95.223	ENSSTOG00000002922	PRPF6	100	95.223	Ictidomys_tridecemlineatus
ENSACAG00000006464	PRPF6	95	98.087	ENSJJAG00000000836	Prpf6	100	98.087	Jaculus_jaculus
ENSACAG00000006464	PRPF6	95	92.242	ENSKMAG00000017800	prpf6	96	92.667	Kryptolebias_marmoratus
ENSACAG00000006464	PRPF6	95	91.605	ENSLBEG00000012582	prpf6	96	91.605	Labrus_bergylta
ENSACAG00000006464	PRPF6	96	93.914	ENSLOCG00000004827	prpf6	97	93.354	Lepisosteus_oculatus
ENSACAG00000006464	PRPF6	95	97.237	ENSLAFG00000005272	PRPF6	100	97.237	Loxodonta_africana
ENSACAG00000006464	PRPF6	95	96.918	ENSMFAG00000037542	PRPF6	100	96.918	Macaca_fascicularis
ENSACAG00000006464	PRPF6	95	90.446	ENSMMUG00000015558	PRPF6	98	99.133	Macaca_mulatta
ENSACAG00000006464	PRPF6	95	82.627	ENSMNEG00000045555	PRPF6	100	82.627	Macaca_nemestrina
ENSACAG00000006464	PRPF6	100	89.372	ENSMAMG00000010718	prpf6	96	92.880	Mastacembelus_armatus
ENSACAG00000006464	PRPF6	95	91.932	ENSMZEG00005015261	-	99	92.357	Maylandia_zebra
ENSACAG00000006464	PRPF6	89	92.063	ENSMZEG00005026539	prpf6	100	92.517	Maylandia_zebra
ENSACAG00000006464	PRPF6	93	98.800	ENSMGAG00000006634	PRPF6	100	98.800	Meleagris_gallopavo
ENSACAG00000006464	PRPF6	95	98.087	ENSMAUG00000013969	Prpf6	100	98.087	Mesocricetus_auratus
ENSACAG00000006464	PRPF6	83	97.202	ENSMICG00000017793	PRPF6	99	97.202	Microcebus_murinus
ENSACAG00000006464	PRPF6	95	98.087	ENSMOCG00000001701	Prpf6	100	98.087	Microtus_ochrogaster
ENSACAG00000006464	PRPF6	95	91.711	ENSMMOG00000020419	prpf6	100	92.136	Mola_mola
ENSACAG00000006464	PRPF6	95	98.520	ENSMODG00000017051	PRPF6	99	98.520	Monodelphis_domestica
ENSACAG00000006464	PRPF6	94	92.481	ENSMALG00000000089	prpf6	100	92.481	Monopterus_albus
ENSACAG00000006464	PRPF6	95	91.498	MGP_CAROLIEiJ_G0024814	Prpf6	100	100.000	Mus_caroli
ENSACAG00000006464	PRPF6	95	98.087	ENSMUSG00000002455	Prpf6	100	100.000	Mus_musculus
ENSACAG00000006464	PRPF6	95	98.087	MGP_PahariEiJ_G0026262	Prpf6	100	100.000	Mus_pahari
ENSACAG00000006464	PRPF6	95	98.087	MGP_SPRETEiJ_G0025741	Prpf6	100	100.000	Mus_spretus
ENSACAG00000006464	PRPF6	87	97.616	ENSMPUG00000008673	PRPF6	99	97.616	Mustela_putorius_furo
ENSACAG00000006464	PRPF6	95	98.087	ENSNGAG00000003365	Prpf6	100	98.087	Nannospalax_galili
ENSACAG00000006464	PRPF6	95	92.561	ENSNBRG00000015025	prpf6	96	92.986	Neolamprologus_brichardi
ENSACAG00000006464	PRPF6	95	96.918	ENSNLEG00000010208	PRPF6	100	96.918	Nomascus_leucogenys
ENSACAG00000006464	PRPF6	95	89.328	ENSMEUG00000009824	-	90	89.328	Notamacropus_eugenii
ENSACAG00000006464	PRPF6	95	92.030	ENSODEG00000004841	PRPF6	100	92.030	Octodon_degus
ENSACAG00000006464	PRPF6	95	92.455	ENSONIG00000017406	prpf6	96	92.880	Oreochromis_niloticus
ENSACAG00000006464	PRPF6	95	98.512	ENSOANG00000004920	PRPF6	100	98.512	Ornithorhynchus_anatinus
ENSACAG00000006464	PRPF6	94	96.352	ENSOCUG00000014151	PRPF6	100	96.352	Oryctolagus_cuniculus
ENSACAG00000006464	PRPF6	95	92.349	ENSORLG00000009592	prpf6	96	92.349	Oryzias_latipes
ENSACAG00000006464	PRPF6	95	92.455	ENSORLG00020001458	prpf6	96	92.455	Oryzias_latipes_hni
ENSACAG00000006464	PRPF6	95	92.455	ENSORLG00015018762	prpf6	96	92.455	Oryzias_latipes_hsok
ENSACAG00000006464	PRPF6	95	92.030	ENSOMEG00000012174	prpf6	96	92.455	Oryzias_melastigma
ENSACAG00000006464	PRPF6	95	90.340	ENSOGAG00000007573	PRPF6	100	90.340	Otolemur_garnettii
ENSACAG00000006464	PRPF6	96	97.037	ENSOARG00000008776	PRPF6	99	97.037	Ovis_aries
ENSACAG00000006464	PRPF6	95	97.024	ENSPPAG00000008686	PRPF6	100	97.024	Pan_paniscus
ENSACAG00000006464	PRPF6	95	97.875	ENSPPRG00000008497	PRPF6	100	97.875	Panthera_pardus
ENSACAG00000006464	PRPF6	93	97.928	ENSPTIG00000011184	PRPF6	97	97.928	Panthera_tigris_altaica
ENSACAG00000006464	PRPF6	95	97.024	ENSPTRG00000013765	PRPF6	100	97.024	Pan_troglodytes
ENSACAG00000006464	PRPF6	95	96.706	ENSPANG00000024135	PRPF6	100	96.706	Papio_anubis
ENSACAG00000006464	PRPF6	96	93.179	ENSPKIG00000005627	prpf6	99	94.080	Paramormyrops_kingsleyae
ENSACAG00000006464	PRPF6	89	98.753	ENSPSIG00000007717	PRPF6	100	98.753	Pelodiscus_sinensis
ENSACAG00000006464	PRPF6	99	86.823	ENSPMGG00000008925	prpf6	96	89.915	Periophthalmus_magnuspinnatus
ENSACAG00000006464	PRPF6	95	97.981	ENSPEMG00000016036	Prpf6	100	97.981	Peromyscus_maniculatus_bairdii
ENSACAG00000006464	PRPF6	97	87.552	ENSPMAG00000006144	prpf6	99	88.105	Petromyzon_marinus
ENSACAG00000006464	PRPF6	95	98.618	ENSPCIG00000017909	PRPF6	100	98.618	Phascolarctos_cinereus
ENSACAG00000006464	PRPF6	95	92.880	ENSPFOG00000006431	prpf6	96	93.305	Poecilia_formosa
ENSACAG00000006464	PRPF6	95	92.774	ENSPLAG00000005974	prpf6	96	93.199	Poecilia_latipinna
ENSACAG00000006464	PRPF6	95	92.986	ENSPMEG00000009977	prpf6	96	93.411	Poecilia_mexicana
ENSACAG00000006464	PRPF6	95	92.880	ENSPREG00000017993	prpf6	92	93.305	Poecilia_reticulata
ENSACAG00000006464	PRPF6	95	96.493	ENSPPYG00000011256	PRPF6	100	96.493	Pongo_abelii
ENSACAG00000006464	PRPF6	90	99.510	ENSPCAG00000006536	PRPF6	88	99.510	Procavia_capensis
ENSACAG00000006464	PRPF6	95	97.237	ENSPCOG00000016881	PRPF6	100	97.237	Propithecus_coquereli
ENSACAG00000006464	PRPF6	95	91.392	ENSPVAG00000014316	PRPF6	100	91.392	Pteropus_vampyrus
ENSACAG00000006464	PRPF6	95	76.008	ENSPNYG00000001939	prpf6	96	81.296	Pundamilia_nyererei
ENSACAG00000006464	PRPF6	96	92.518	ENSPNAG00000015606	prpf6	97	92.940	Pygocentrus_nattereri
ENSACAG00000006464	PRPF6	95	97.981	ENSRNOG00000051498	Prpf6	100	97.981	Rattus_norvegicus
ENSACAG00000006464	PRPF6	95	96.918	ENSRBIG00000043613	PRPF6	100	96.918	Rhinopithecus_bieti
ENSACAG00000006464	PRPF6	95	93.651	ENSRROG00000040969	PRPF6	98	97.751	Rhinopithecus_roxellana
ENSACAG00000006464	PRPF6	86	94.867	ENSSBOG00000020632	PRPF6	91	94.867	Saimiri_boliviensis_boliviensis
ENSACAG00000006464	PRPF6	95	98.618	ENSSHAG00000016810	PRPF6	100	98.618	Sarcophilus_harrisii
ENSACAG00000006464	PRPF6	94	94.522	ENSSFOG00015020859	prpf6	100	94.952	Scleropages_formosus
ENSACAG00000006464	PRPF6	95	91.498	ENSSMAG00000008112	prpf6	96	91.498	Scophthalmus_maximus
ENSACAG00000006464	PRPF6	95	92.136	ENSSDUG00000016142	prpf6	96	92.561	Seriola_dumerili
ENSACAG00000006464	PRPF6	95	92.136	ENSSLDG00000025283	prpf6	100	89.160	Seriola_lalandi_dorsalis
ENSACAG00000006464	PRPF6	89	97.846	ENSSPUG00000018260	PRPF6	100	97.846	Sphenodon_punctatus
ENSACAG00000006464	PRPF6	95	92.136	ENSSPAG00000015850	prpf6	96	92.561	Stegastes_partitus
ENSACAG00000006464	PRPF6	96	97.037	ENSSSCG00000029119	PRPF6	100	97.279	Sus_scrofa
ENSACAG00000006464	PRPF6	96	98.517	ENSTGUG00000007221	PRPF6	100	98.517	Taeniopygia_guttata
ENSACAG00000006464	PRPF6	95	91.392	ENSTRUG00000002920	prpf6	96	91.817	Takifugu_rubripes
ENSACAG00000006464	PRPF6	95	85.095	ENSTNIG00000017873	prpf6	100	85.518	Tetraodon_nigroviridis
ENSACAG00000006464	PRPF6	84	98.343	ENSTBEG00000005348	PRPF6	85	98.343	Tupaia_belangeri
ENSACAG00000006464	PRPF6	95	97.024	ENSTTRG00000013068	PRPF6	100	97.024	Tursiops_truncatus
ENSACAG00000006464	PRPF6	99	91.726	ENSUMAG00000021631	PRPF6	98	96.413	Ursus_maritimus
ENSACAG00000006464	PRPF6	95	98.087	ENSVVUG00000014948	PRPF6	100	98.087	Vulpes_vulpes
ENSACAG00000006464	PRPF6	97	95.283	ENSXETG00000012054	prpf6	98	95.996	Xenopus_tropicalis
ENSACAG00000006464	PRPF6	95	92.986	ENSXCOG00000008082	prpf6	96	93.411	Xiphophorus_couchianus
ENSACAG00000006464	PRPF6	95	92.986	ENSXMAG00000015581	prpf6	96	93.411	Xiphophorus_maculatus