EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000006550 (Gene tree)
Gene ID: 100562788
Gene Symbol: RPP40
Alias: RNASEP1|bA428J1.3
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 14571 bases
Position: chrGL344476.1:12919-27489
Accession: 100562788
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000006444	Ribonuc_P_40	PF08584.11	1.1e-93	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000006589	RPP40-201	6344	XM_003230109	ENSACAP00000006444	408 (aa)	XP_003230157	H9GBM8

Gene Model

Click here to download ENSACAG00000006550's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03008	Ribosome biogenesis in eukaryotes	KEGG
acs03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000006550's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000006550	RPP40	88	62.953	ENSG00000124787	RPP40	99	64.548	Homo_sapiens
ENSACAG00000006550	RPP40	79	30.841	ENSAPOG00000008660	rpp40	91	30.841	Acanthochromis_polyacanthus
ENSACAG00000006550	RPP40	88	64.903	ENSAMEG00000012938	RPP40	99	64.903	Ailuropoda_melanoleuca
ENSACAG00000006550	RPP40	89	35.813	ENSACIG00000003617	rpp40	99	35.813	Amphilophus_citrinellus
ENSACAG00000006550	RPP40	87	37.640	ENSAOCG00000011846	rpp40	99	37.640	Amphiprion_ocellaris
ENSACAG00000006550	RPP40	87	37.640	ENSAPEG00000001322	rpp40	99	37.640	Amphiprion_percula
ENSACAG00000006550	RPP40	87	38.827	ENSATEG00000006584	rpp40	99	39.944	Anabas_testudineus
ENSACAG00000006550	RPP40	74	73.179	ENSAPLG00000005691	RPP40	99	73.179	Anas_platyrhynchos
ENSACAG00000006550	RPP40	88	61.560	ENSANAG00000029246	RPP40	99	61.560	Aotus_nancymaae
ENSACAG00000006550	RPP40	86	38.177	ENSACLG00000015883	rpp40	95	38.177	Astatotilapia_calliptera
ENSACAG00000006550	RPP40	87	46.629	ENSAMXG00000001755	rpp40	99	46.629	Astyanax_mexicanus
ENSACAG00000006550	RPP40	88	64.345	ENSBTAG00000003332	RPP40	99	64.345	Bos_taurus
ENSACAG00000006550	RPP40	88	61.560	ENSCJAG00000021373	RPP40	99	61.560	Callithrix_jacchus
ENSACAG00000006550	RPP40	88	64.903	ENSCAFG00000009435	RPP40	99	64.903	Canis_familiaris
ENSACAG00000006550	RPP40	88	64.903	ENSCAFG00020013380	RPP40	99	64.903	Canis_lupus_dingo
ENSACAG00000006550	RPP40	88	64.903	ENSCHIG00000016849	RPP40	99	66.777	Capra_hircus
ENSACAG00000006550	RPP40	88	65.181	ENSTSYG00000032857	RPP40	99	66.221	Carlito_syrichta
ENSACAG00000006550	RPP40	79	61.059	ENSCAPG00000004957	RPP40	96	61.059	Cavia_aperea
ENSACAG00000006550	RPP40	88	64.903	ENSCPOG00000005855	RPP40	99	64.903	Cavia_porcellus
ENSACAG00000006550	RPP40	88	61.560	ENSCCAG00000019809	RPP40	99	61.560	Cebus_capucinus
ENSACAG00000006550	RPP40	88	62.953	ENSCATG00000038787	RPP40	99	62.953	Cercocebus_atys
ENSACAG00000006550	RPP40	88	64.624	ENSCLAG00000003235	RPP40	99	64.624	Chinchilla_lanigera
ENSACAG00000006550	RPP40	88	62.396	ENSCSAG00000007307	RPP40	99	62.396	Chlorocebus_sabaeus
ENSACAG00000006550	RPP40	61	53.012	ENSCHOG00000005856	-	99	53.012	Choloepus_hoffmanni
ENSACAG00000006550	RPP40	89	77.961	ENSCPBG00000009003	RPP40	99	77.961	Chrysemys_picta_bellii
ENSACAG00000006550	RPP40	88	62.674	ENSCANG00000033965	RPP40	99	62.674	Colobus_angolensis_palliatus
ENSACAG00000006550	RPP40	88	63.788	ENSCGRG00001018328	Rpp40	99	63.788	Cricetulus_griseus_chok1gshd
ENSACAG00000006550	RPP40	88	63.788	ENSCGRG00000011344	Rpp40	99	63.788	Cricetulus_griseus_crigri
ENSACAG00000006550	RPP40	87	35.311	ENSCSEG00000015006	-	98	35.311	Cynoglossus_semilaevis
ENSACAG00000006550	RPP40	66	32.841	ENSCVAG00000012169	rpp40	99	32.841	Cyprinodon_variegatus
ENSACAG00000006550	RPP40	87	48.179	ENSDARG00000017605	rpp40	99	48.179	Danio_rerio
ENSACAG00000006550	RPP40	72	61.565	ENSDNOG00000048136	RPP40	99	61.565	Dasypus_novemcinctus
ENSACAG00000006550	RPP40	88	62.674	ENSDORG00000029944	-	99	62.674	Dipodomys_ordii
ENSACAG00000006550	RPP40	88	47.967	ENSDORG00000011196	-	99	47.967	Dipodomys_ordii
ENSACAG00000006550	RPP40	88	50.696	ENSETEG00000007458	RPP40	99	50.696	Echinops_telfairi
ENSACAG00000006550	RPP40	87	44.507	ENSEBUG00000000386	rpp40	99	44.548	Eptatretus_burgeri
ENSACAG00000006550	RPP40	94	60.302	ENSEASG00005012116	RPP40	88	60.302	Equus_asinus_asinus
ENSACAG00000006550	RPP40	94	60.302	ENSECAG00000017247	RPP40	88	60.302	Equus_caballus
ENSACAG00000006550	RPP40	72	47.959	ENSEEUG00000012087	RPP40	99	47.959	Erinaceus_europaeus
ENSACAG00000006550	RPP40	87	49.300	ENSELUG00000017004	rpp40	99	49.300	Esox_lucius
ENSACAG00000006550	RPP40	88	63.788	ENSFCAG00000009249	RPP40	99	63.788	Felis_catus
ENSACAG00000006550	RPP40	76	69.632	ENSFALG00000013166	RPP40	99	69.632	Ficedula_albicollis
ENSACAG00000006550	RPP40	88	65.181	ENSFDAG00000013001	-	99	65.181	Fukomys_damarensis
ENSACAG00000006550	RPP40	72	52.740	ENSFDAG00000000265	-	99	52.740	Fukomys_damarensis
ENSACAG00000006550	RPP40	87	41.292	ENSFHEG00000021429	rpp40	88	41.292	Fundulus_heteroclitus
ENSACAG00000006550	RPP40	79	39.252	ENSGMOG00000018653	rpp40	99	39.252	Gadus_morhua
ENSACAG00000006550	RPP40	89	71.350	ENSGALG00000036074	RPP40	99	71.350	Gallus_gallus
ENSACAG00000006550	RPP40	74	36.877	ENSGAFG00000004189	-	99	36.877	Gambusia_affinis
ENSACAG00000006550	RPP40	87	39.326	ENSGACG00000002472	rpp40	99	39.326	Gasterosteus_aculeatus
ENSACAG00000006550	RPP40	89	78.237	ENSGAGG00000012918	RPP40	99	78.237	Gopherus_agassizii
ENSACAG00000006550	RPP40	88	62.953	ENSGGOG00000013764	RPP40	99	62.953	Gorilla_gorilla
ENSACAG00000006550	RPP40	79	36.137	ENSHBUG00000009378	rpp40	91	36.137	Haplochromis_burtoni
ENSACAG00000006550	RPP40	88	64.345	ENSHGLG00000004871	RPP40	99	64.345	Heterocephalus_glaber_female
ENSACAG00000006550	RPP40	88	64.345	ENSHGLG00100002080	RPP40	99	64.345	Heterocephalus_glaber_male
ENSACAG00000006550	RPP40	86	32.670	ENSHCOG00000013264	-	94	32.670	Hippocampus_comes
ENSACAG00000006550	RPP40	87	48.596	ENSIPUG00000008951	RPP40	99	48.596	Ictalurus_punctatus
ENSACAG00000006550	RPP40	88	62.953	ENSSTOG00000011199	RPP40	99	62.953	Ictidomys_tridecemlineatus
ENSACAG00000006550	RPP40	88	60.446	ENSJJAG00000020629	Rpp40	99	60.446	Jaculus_jaculus
ENSACAG00000006550	RPP40	87	36.517	ENSKMAG00000019358	rpp40	99	36.517	Kryptolebias_marmoratus
ENSACAG00000006550	RPP40	87	41.573	ENSLBEG00000022724	rpp40	99	41.573	Labrus_bergylta
ENSACAG00000006550	RPP40	87	60.955	ENSLACG00000014848	RPP40	99	60.955	Latimeria_chalumnae
ENSACAG00000006550	RPP40	87	53.371	ENSLOCG00000011650	rpp40	98	53.371	Lepisosteus_oculatus
ENSACAG00000006550	RPP40	73	65.886	ENSLAFG00000007530	RPP40	99	65.886	Loxodonta_africana
ENSACAG00000006550	RPP40	88	62.117	ENSMFAG00000043100	RPP40	99	62.117	Macaca_fascicularis
ENSACAG00000006550	RPP40	88	62.396	ENSMMUG00000004966	RPP40	99	62.396	Macaca_mulatta
ENSACAG00000006550	RPP40	88	62.396	ENSMNEG00000041986	RPP40	99	63.880	Macaca_nemestrina
ENSACAG00000006550	RPP40	87	65.049	ENSMLEG00000040851	RPP40	99	65.049	Mandrillus_leucophaeus
ENSACAG00000006550	RPP40	87	38.764	ENSMAMG00000019551	rpp40	98	38.764	Mastacembelus_armatus
ENSACAG00000006550	RPP40	87	38.483	ENSMZEG00005019475	rpp40	98	38.483	Maylandia_zebra
ENSACAG00000006550	RPP40	79	72.446	ENSMGAG00000004009	RPP40	90	72.446	Meleagris_gallopavo
ENSACAG00000006550	RPP40	88	64.067	ENSMAUG00000010268	Rpp40	99	64.067	Mesocricetus_auratus
ENSACAG00000006550	RPP40	90	62.060	ENSMICG00000003297	RPP40	99	58.496	Microcebus_murinus
ENSACAG00000006550	RPP40	88	63.510	ENSMOCG00000000305	Rpp40	99	63.510	Microtus_ochrogaster
ENSACAG00000006550	RPP40	87	32.222	ENSMMOG00000020591	-	98	32.222	Mola_mola
ENSACAG00000006550	RPP40	88	65.000	ENSMODG00000009826	RPP40	99	65.000	Monodelphis_domestica
ENSACAG00000006550	RPP40	87	39.045	ENSMALG00000020133	rpp40	99	39.045	Monopterus_albus
ENSACAG00000006550	RPP40	88	63.510	MGP_CAROLIEiJ_G0018429	Rpp40	99	63.510	Mus_caroli
ENSACAG00000006550	RPP40	88	63.788	ENSMUSG00000021418	Rpp40	99	63.788	Mus_musculus
ENSACAG00000006550	RPP40	88	64.067	MGP_PahariEiJ_G0019497	Rpp40	99	64.067	Mus_pahari
ENSACAG00000006550	RPP40	88	63.231	MGP_SPRETEiJ_G0019309	Rpp40	99	63.231	Mus_spretus
ENSACAG00000006550	RPP40	90	63.215	ENSMPUG00000000530	RPP40	94	63.215	Mustela_putorius_furo
ENSACAG00000006550	RPP40	88	62.953	ENSMLUG00000000501	RPP40	99	62.953	Myotis_lucifugus
ENSACAG00000006550	RPP40	84	56.268	ENSNGAG00000022529	-	99	56.268	Nannospalax_galili
ENSACAG00000006550	RPP40	88	64.067	ENSNGAG00000023955	-	99	64.067	Nannospalax_galili
ENSACAG00000006550	RPP40	78	33.851	ENSNBRG00000017465	rpp40	86	34.049	Neolamprologus_brichardi
ENSACAG00000006550	RPP40	88	62.953	ENSNLEG00000034397	RPP40	99	62.953	Nomascus_leucogenys
ENSACAG00000006550	RPP40	88	59.053	ENSMEUG00000005300	RPP40	99	59.053	Notamacropus_eugenii
ENSACAG00000006550	RPP40	88	64.067	ENSODEG00000007255	-	99	64.067	Octodon_degus
ENSACAG00000006550	RPP40	79	59.813	ENSODEG00000006170	-	99	59.813	Octodon_degus
ENSACAG00000006550	RPP40	88	60.446	ENSODEG00000018153	-	99	60.446	Octodon_degus
ENSACAG00000006550	RPP40	87	38.764	ENSONIG00000014016	rpp40	98	38.764	Oreochromis_niloticus
ENSACAG00000006550	RPP40	74	68.212	ENSOANG00000001200	RPP40	99	68.212	Ornithorhynchus_anatinus
ENSACAG00000006550	RPP40	88	58.380	ENSOCUG00000000354	RPP40	99	58.380	Oryctolagus_cuniculus
ENSACAG00000006550	RPP40	87	40.169	ENSORLG00000008242	-	99	40.169	Oryzias_latipes
ENSACAG00000006550	RPP40	88	39.889	ENSORLG00020013745	-	91	39.889	Oryzias_latipes_hni
ENSACAG00000006550	RPP40	87	40.449	ENSORLG00015000887	-	99	40.449	Oryzias_latipes_hsok
ENSACAG00000006550	RPP40	87	40.449	ENSOMEG00000002747	rpp40	99	40.449	Oryzias_melastigma
ENSACAG00000006550	RPP40	88	64.624	ENSOGAG00000006055	RPP40	99	64.624	Otolemur_garnettii
ENSACAG00000006550	RPP40	81	64.458	ENSOARG00000018783	RPP40	99	66.777	Ovis_aries
ENSACAG00000006550	RPP40	88	62.953	ENSPPAG00000023703	RPP40	99	62.953	Pan_paniscus
ENSACAG00000006550	RPP40	88	63.510	ENSPPRG00000005612	RPP40	99	63.510	Panthera_pardus
ENSACAG00000006550	RPP40	88	59.331	ENSPTIG00000018847	RPP40	99	59.331	Panthera_tigris_altaica
ENSACAG00000006550	RPP40	88	62.953	ENSPTRG00000017690	RPP40	99	62.953	Pan_troglodytes
ENSACAG00000006550	RPP40	88	62.674	ENSPANG00000017865	RPP40	99	62.674	Papio_anubis
ENSACAG00000006550	RPP40	87	51.541	ENSPKIG00000006311	rpp40	99	51.541	Paramormyrops_kingsleyae
ENSACAG00000006550	RPP40	54	73.303	ENSPSIG00000007854	RPP40	99	73.303	Pelodiscus_sinensis
ENSACAG00000006550	RPP40	82	55.357	ENSPEMG00000020809	Rpp40	91	55.357	Peromyscus_maniculatus_bairdii
ENSACAG00000006550	RPP40	67	48.175	ENSPMAG00000008412	rpp40	99	48.175	Petromyzon_marinus
ENSACAG00000006550	RPP40	88	65.738	ENSPCIG00000010682	RPP40	99	65.738	Phascolarctos_cinereus
ENSACAG00000006550	RPP40	87	37.709	ENSPFOG00000011460	rpp40	98	37.709	Poecilia_formosa
ENSACAG00000006550	RPP40	87	37.079	ENSPLAG00000001334	rpp40	99	37.079	Poecilia_latipinna
ENSACAG00000006550	RPP40	87	38.202	ENSPMEG00000007721	rpp40	99	38.202	Poecilia_mexicana
ENSACAG00000006550	RPP40	87	38.764	ENSPREG00000009215	rpp40	99	38.764	Poecilia_reticulata
ENSACAG00000006550	RPP40	88	62.674	ENSPPYG00000016194	RPP40	99	62.674	Pongo_abelii
ENSACAG00000006550	RPP40	88	64.903	ENSPCOG00000003907	RPP40	99	64.903	Propithecus_coquereli
ENSACAG00000006550	RPP40	88	64.624	ENSPVAG00000011325	RPP40	99	64.624	Pteropus_vampyrus
ENSACAG00000006550	RPP40	74	36.877	ENSPNYG00000004432	rpp40	99	36.877	Pundamilia_nyererei
ENSACAG00000006550	RPP40	87	47.619	ENSPNAG00000019125	rpp40	99	47.619	Pygocentrus_nattereri
ENSACAG00000006550	RPP40	88	63.510	ENSRNOG00000016226	Rpp40	99	65.781	Rattus_norvegicus
ENSACAG00000006550	RPP40	88	62.674	ENSRBIG00000035800	RPP40	99	64.214	Rhinopithecus_bieti
ENSACAG00000006550	RPP40	88	62.674	ENSRROG00000039116	RPP40	99	62.674	Rhinopithecus_roxellana
ENSACAG00000006550	RPP40	88	61.003	ENSSBOG00000020297	RPP40	99	61.003	Saimiri_boliviensis_boliviensis
ENSACAG00000006550	RPP40	68	66.426	ENSSHAG00000002102	RPP40	99	66.426	Sarcophilus_harrisii
ENSACAG00000006550	RPP40	87	52.101	ENSSFOG00015001142	rpp40	80	52.101	Scleropages_formosus
ENSACAG00000006550	RPP40	87	39.326	ENSSDUG00000007202	rpp40	99	39.326	Seriola_dumerili
ENSACAG00000006550	RPP40	87	39.607	ENSSLDG00000017563	rpp40	99	39.607	Seriola_lalandi_dorsalis
ENSACAG00000006550	RPP40	89	77.410	ENSSPUG00000017487	-	99	77.410	Sphenodon_punctatus
ENSACAG00000006550	RPP40	72	74.830	ENSSPUG00000018950	-	99	74.830	Sphenodon_punctatus
ENSACAG00000006550	RPP40	87	37.921	ENSSPAG00000022716	rpp40	99	37.921	Stegastes_partitus
ENSACAG00000006550	RPP40	87	63.202	ENSSSCG00000000998	RPP40	99	65.000	Sus_scrofa
ENSACAG00000006550	RPP40	87	72.472	ENSTGUG00000002258	-	99	72.472	Taeniopygia_guttata
ENSACAG00000006550	RPP40	86	38.068	ENSTRUG00000003755	rpp40	98	38.068	Takifugu_rubripes
ENSACAG00000006550	RPP40	86	40.057	ENSTNIG00000003077	rpp40	97	40.057	Tetraodon_nigroviridis
ENSACAG00000006550	RPP40	61	44.980	ENSTBEG00000014467	-	73	44.980	Tupaia_belangeri
ENSACAG00000006550	RPP40	87	59.551	ENSTTRG00000007319	RPP40	98	59.551	Tursiops_truncatus
ENSACAG00000006550	RPP40	88	65.181	ENSUAMG00000002159	RPP40	99	67.224	Ursus_americanus
ENSACAG00000006550	RPP40	90	64.754	ENSUMAG00000018639	RPP40	94	64.754	Ursus_maritimus
ENSACAG00000006550	RPP40	71	47.440	ENSVPAG00000004652	-	99	47.440	Vicugna_pacos
ENSACAG00000006550	RPP40	88	65.181	ENSVVUG00000005451	RPP40	99	65.181	Vulpes_vulpes
ENSACAG00000006550	RPP40	88	54.444	ENSXETG00000017617	rpp40	99	54.444	Xenopus_tropicalis
ENSACAG00000006550	RPP40	87	31.579	ENSXMAG00000024940	rpp40	98	31.579	Xiphophorus_maculatus