EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSACAG00000006607 (Gene tree)
Gene ID
100564102
Gene Symbol
PATL1
Alias
FLJ36874|Pat1b
Full Name
PAT1 homolog 1%2C processing body mRNA decay factor
Gene Type
protein_coding
Species
Anolis_carolinensis
Status
putative
Strand
Plus strand
Length
14904 bases
Position
chr1:90978972-90993875
Accession
100564102
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSACAP00000006495PAT1PF09770.95e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSACAT00000006640PATL1-2012304XM_008110706ENSACAP00000006495767 (aa)XP_008108913G1KFK1
Gene Model
Click here to download ENSACAG00000006607's gene model file
Pathways
Pathway IDPathway NameSource
acs03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000006607's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSACAG00000006607PATL19979.118ENSG00000166889PATL19979.896Homo_sapiens
ENSACAG00000006607PATL15935.714ENSG00000229474PATL29937.398Homo_sapiens
ENSACAG00000006607PATL18652.983ENSAPOG00000021290patl19846.855Acanthochromis_polyacanthus
ENSACAG00000006607PATL16835.104ENSAPOG00000022988patl27335.104Acanthochromis_polyacanthus
ENSACAG00000006607PATL19979.145ENSAMEG00000014215PATL19979.534Ailuropoda_melanoleuca
ENSACAG00000006607PATL16234.888ENSAMEG00000014997PATL28834.888Ailuropoda_melanoleuca
ENSACAG00000006607PATL19945.194ENSACIG00000005182patl19946.758Amphilophus_citrinellus
ENSACAG00000006607PATL16934.062ENSAOCG00000023738patl26734.062Amphiprion_ocellaris
ENSACAG00000006607PATL15453.110ENSAOCG00000021993patl19545.897Amphiprion_ocellaris
ENSACAG00000006607PATL16261.017ENSAPEG00000021391patl17666.102Amphiprion_percula
ENSACAG00000006607PATL15935.385ENSAPEG00000011299patl26735.385Amphiprion_percula
ENSACAG00000006607PATL16133.686ENSATEG00000019567patl26633.686Anabas_testudineus
ENSACAG00000006607PATL18959.322ENSATEG00000002230patl18052.326Anabas_testudineus
ENSACAG00000006607PATL18732.692ENSAPLG00000003980PATL29833.432Anas_platyrhynchos
ENSACAG00000006607PATL17170.886ENSAPLG00000013394PATL110071.248Anas_platyrhynchos
ENSACAG00000006607PATL19979.248ENSANAG00000023078PATL19980.026Aotus_nancymaae
ENSACAG00000006607PATL16235.000ENSACLG00000010326patl26035.000Astatotilapia_calliptera
ENSACAG00000006607PATL16262.712ENSACLG00000005144patl18449.545Astatotilapia_calliptera
ENSACAG00000006607PATL18552.745ENSAMXG00000010731patl19946.344Astyanax_mexicanus
ENSACAG00000006607PATL16336.821ENSAMXG00000020293patl26636.821Astyanax_mexicanus
ENSACAG00000006607PATL19979.145ENSBTAG00000005913PATL19979.922Bos_taurus
ENSACAG00000006607PATL15936.324ENSCJAG00000002379PATL27936.543Callithrix_jacchus
ENSACAG00000006607PATL19978.988ENSCJAG00000016192PATL19979.637Callithrix_jacchus
ENSACAG00000006607PATL19979.534ENSCAFG00000007581PATL19979.922Canis_familiaris
ENSACAG00000006607PATL16436.166ENSCAFG00000013629PATL28736.166Canis_familiaris
ENSACAG00000006607PATL16436.166ENSCAFG00020022169PATL28636.166Canis_lupus_dingo
ENSACAG00000006607PATL19979.790ENSCAFG00020001648PATL19979.896Canis_lupus_dingo
ENSACAG00000006607PATL16336.779ENSCHIG00000026665PATL28836.779Capra_hircus
ENSACAG00000006607PATL19978.368ENSCHIG00000025913PATL19979.275Capra_hircus
ENSACAG00000006607PATL19979.531ENSTSYG00000012748PATL19580.183Carlito_syrichta
ENSACAG00000006607PATL110077.519ENSCAPG00000013668PATL19978.036Cavia_aperea
ENSACAG00000006607PATL19975.727ENSCPOG00000006827PATL19976.233Cavia_porcellus
ENSACAG00000006607PATL19979.118ENSCCAG00000023759PATL19979.896Cebus_capucinus
ENSACAG00000006607PATL19978.859ENSCATG00000009629PATL19979.637Cercocebus_atys
ENSACAG00000006607PATL19977.705ENSCLAG00000003427PATL110078.357Chinchilla_lanigera
ENSACAG00000006607PATL15136.294ENSCLAG00000014407PATL27336.524Chinchilla_lanigera
ENSACAG00000006607PATL19079.770ENSCSAG00000006095PATL110080.631Chlorocebus_sabaeus
ENSACAG00000006607PATL16882.201ENSCHOG00000001611PATL18382.201Choloepus_hoffmanni
ENSACAG00000006607PATL16536.310ENSCPBG00000006150PATL26936.310Chrysemys_picta_bellii
ENSACAG00000006607PATL17931.988ENSCING00000021535-9931.988Ciona_intestinalis
ENSACAG00000006607PATL19978.988ENSCANG00000039197PATL19981.501Colobus_angolensis_palliatus
ENSACAG00000006607PATL15935.886ENSCANG00000013856PATL27936.026Colobus_angolensis_palliatus
ENSACAG00000006607PATL19979.637ENSCGRG00001024927Patl19980.415Cricetulus_griseus_chok1gshd
ENSACAG00000006607PATL19979.922ENSCGRG00000000461Patl110080.704Cricetulus_griseus_crigri
ENSACAG00000006607PATL16261.017ENSCSEG00000008261patl18150.479Cynoglossus_semilaevis
ENSACAG00000006607PATL16233.682ENSCSEG00000009438patl26333.682Cynoglossus_semilaevis
ENSACAG00000006607PATL15830.735ENSCVAG00000016203patl26430.735Cyprinodon_variegatus
ENSACAG00000006607PATL18950.000ENSCVAG00000006664patl19945.696Cyprinodon_variegatus
ENSACAG00000006607PATL19944.928ENSDARG00000017423patl19945.181Danio_rerio
ENSACAG00000006607PATL16634.706ENSDARG00000089567patl26634.706Danio_rerio
ENSACAG00000006607PATL19974.968ENSDNOG00000038865PATL19980.762Dasypus_novemcinctus
ENSACAG00000006607PATL19979.637ENSDORG00000000237Patl19980.415Dipodomys_ordii
ENSACAG00000006607PATL15736.961ENSDORG00000026649Patl28136.961Dipodomys_ordii
ENSACAG00000006607PATL19979.351ENSEASG00005007963PATL19979.948Equus_asinus_asinus
ENSACAG00000006607PATL19979.351ENSECAG00000011411PATL19979.948Equus_caballus
ENSACAG00000006607PATL18574.286ENSELUG00000024249patl19845.357Esox_lucius
ENSACAG00000006607PATL19979.637ENSFCAG00000015573PATL19980.026Felis_catus
ENSACAG00000006607PATL15936.069ENSFCAG00000027170PATL28036.069Felis_catus
ENSACAG00000006607PATL19631.479ENSFALG00000009768PATL29831.418Ficedula_albicollis
ENSACAG00000006607PATL19981.593ENSFALG00000012150PATL19981.723Ficedula_albicollis
ENSACAG00000006607PATL19978.796ENSFDAG00000016128PATL110079.319Fukomys_damarensis
ENSACAG00000006607PATL15235.149ENSFDAG00000012242PATL27436.118Fukomys_damarensis
ENSACAG00000006607PATL16262.712ENSFHEG00000017790patl18751.040Fundulus_heteroclitus
ENSACAG00000006607PATL15832.816ENSGMOG00000005666patl29934.360Gadus_morhua
ENSACAG00000006607PATL16436.640ENSGALG00000002167PATL25936.031Gallus_gallus
ENSACAG00000006607PATL19979.003ENSGALG00000042641PATL19979.396Gallus_gallus
ENSACAG00000006607PATL18732.138ENSGAFG00000019344patl29431.152Gambusia_affinis
ENSACAG00000006607PATL18953.095ENSGAFG00000006508patl17151.037Gambusia_affinis
ENSACAG00000006607PATL19946.452ENSGACG00000016448patl19949.100Gasterosteus_aculeatus
ENSACAG00000006607PATL19983.917ENSGAGG00000004461PATL110085.244Gopherus_agassizii
ENSACAG00000006607PATL15936.324ENSGGOG00000025923PATL27936.324Gorilla_gorilla
ENSACAG00000006607PATL19979.118ENSGGOG00000004335PATL19979.896Gorilla_gorilla
ENSACAG00000006607PATL16262.712ENSHBUG00000005365patl18050.560Haplochromis_burtoni
ENSACAG00000006607PATL15935.320ENSHBUG00000005929patl26535.242Haplochromis_burtoni
ENSACAG00000006607PATL19977.821ENSHGLG00000018173PATL19978.340Heterocephalus_glaber_female
ENSACAG00000006607PATL19976.893ENSHGLG00100003453PATL110077.415Heterocephalus_glaber_male
ENSACAG00000006607PATL19730.260ENSHCOG00000016754patl29330.260Hippocampus_comes
ENSACAG00000006607PATL18962.712ENSHCOG00000001898patl17955.128Hippocampus_comes
ENSACAG00000006607PATL15737.444ENSIPUG00000020692patl26037.444Ictalurus_punctatus
ENSACAG00000006607PATL19880.132ENSSTOG00000013764PATL19980.921Ictidomys_tridecemlineatus
ENSACAG00000006607PATL16735.104ENSSTOG00000033848PATL28835.104Ictidomys_tridecemlineatus
ENSACAG00000006607PATL19978.460ENSJJAG00000010135Patl110079.243Jaculus_jaculus
ENSACAG00000006607PATL15980.000ENSKMAG00000020848patl17951.807Kryptolebias_marmoratus
ENSACAG00000006607PATL16233.333ENSKMAG00000021275patl25933.333Kryptolebias_marmoratus
ENSACAG00000006607PATL18964.407ENSLBEG00000023617patl17856.250Labrus_bergylta
ENSACAG00000006607PATL16034.549ENSLBEG00000022344patl25934.549Labrus_bergylta
ENSACAG00000006607PATL19857.328ENSLACG00000004640PATL19957.494Latimeria_chalumnae
ENSACAG00000006607PATL19831.351ENSLACG00000005291-9831.351Latimeria_chalumnae
ENSACAG00000006607PATL19947.990ENSLOCG00000000717patl19948.348Lepisosteus_oculatus
ENSACAG00000006607PATL19979.275ENSLAFG00000015161PATL19980.181Loxodonta_africana
ENSACAG00000006607PATL15136.869ENSLAFG00000031124PATL27136.869Loxodonta_africana
ENSACAG00000006607PATL19978.988ENSMFAG00000040851PATL19979.637Macaca_fascicularis
ENSACAG00000006607PATL19978.859ENSMMUG00000017287PATL19979.637Macaca_mulatta
ENSACAG00000006607PATL19978.859ENSMNEG00000038692PATL19979.637Macaca_nemestrina
ENSACAG00000006607PATL19978.859ENSMLEG00000030044PATL19979.637Mandrillus_leucophaeus
ENSACAG00000006607PATL18577.419ENSMAMG00000003950patl19947.030Mastacembelus_armatus
ENSACAG00000006607PATL16233.684ENSMAMG00000013327patl26733.684Mastacembelus_armatus
ENSACAG00000006607PATL16262.712ENSMZEG00005013404patl18050.560Maylandia_zebra
ENSACAG00000006607PATL16235.000ENSMZEG00005014292patl26035.000Maylandia_zebra
ENSACAG00000006607PATL19279.267ENSMGAG00000003406PATL19979.267Meleagris_gallopavo
ENSACAG00000006607PATL18580.734ENSMAUG00000012059Patl19780.734Mesocricetus_auratus
ENSACAG00000006607PATL19975.781ENSMICG00000004172PATL19881.517Microcebus_murinus
ENSACAG00000006607PATL15835.938ENSMOCG00000015367Patl28035.938Microtus_ochrogaster
ENSACAG00000006607PATL19979.637ENSMOCG00000010087Patl19980.415Microtus_ochrogaster
ENSACAG00000006607PATL16230.947ENSMMOG00000001299patl26630.947Mola_mola
ENSACAG00000006607PATL19945.942ENSMMOG00000013711patl19946.265Mola_mola
ENSACAG00000006607PATL19983.636ENSMODG00000020201PATL19983.766Monodelphis_domestica
ENSACAG00000006607PATL15936.580ENSMODG00000017690PATL28334.879Monodelphis_domestica
ENSACAG00000006607PATL17955.615ENSMALG00000018706patl19943.377Monopterus_albus
ENSACAG00000006607PATL16033.602ENSMALG00000008131patl26233.602Monopterus_albus
ENSACAG00000006607PATL19978.988MGP_CAROLIEiJ_G0022739Patl19979.767Mus_caroli
ENSACAG00000006607PATL19978.859ENSMUSG00000046139Patl19979.637Mus_musculus
ENSACAG00000006607PATL19978.988MGP_PahariEiJ_G0014233Patl19979.767Mus_pahari
ENSACAG00000006607PATL19978.988MGP_SPRETEiJ_G0023652Patl19979.767Mus_spretus
ENSACAG00000006607PATL19979.793ENSMPUG00000014607PATL19980.181Mustela_putorius_furo
ENSACAG00000006607PATL19976.813ENSMLUG00000011169PATL19977.591Myotis_lucifugus
ENSACAG00000006607PATL19979.036ENSNGAG00000003682Patl19979.557Nannospalax_galili
ENSACAG00000006607PATL16234.232ENSNBRG00000011745patl26434.304Neolamprologus_brichardi
ENSACAG00000006607PATL19976.209ENSNLEG00000013081PATL19976.863Nomascus_leucogenys
ENSACAG00000006607PATL15935.886ENSNLEG00000005673PATL28035.886Nomascus_leucogenys
ENSACAG00000006607PATL16795.455ENSMEUG00000009391PATL18881.579Notamacropus_eugenii
ENSACAG00000006607PATL16881.407ENSOPRG00000007963PATL17981.407Ochotona_princeps
ENSACAG00000006607PATL17076.655ENSODEG00000001792PATL19975.000Octodon_degus
ENSACAG00000006607PATL16262.712ENSONIG00000004170patl19947.409Oreochromis_niloticus
ENSACAG00000006607PATL16235.343ENSONIG00000011519patl26035.343Oreochromis_niloticus
ENSACAG00000006607PATL15137.157ENSOANG00000001538-8437.750Ornithorhynchus_anatinus
ENSACAG00000006607PATL15283.459ENSOANG00000011117-9783.459Ornithorhynchus_anatinus
ENSACAG00000006607PATL15236.070ENSOCUG00000006339PATL27436.070Oryctolagus_cuniculus
ENSACAG00000006607PATL19979.637ENSOCUG00000002156PATL19980.415Oryctolagus_cuniculus
ENSACAG00000006607PATL16234.172ENSORLG00000005780patl26034.172Oryzias_latipes
ENSACAG00000006607PATL16433.466ENSORLG00020016506patl26133.466Oryzias_latipes_hni
ENSACAG00000006607PATL16234.382ENSORLG00015014500patl26034.382Oryzias_latipes_hsok
ENSACAG00000006607PATL15436.256ENSOMEG00000021628patl26234.937Oryzias_melastigma
ENSACAG00000006607PATL19979.896ENSOGAG00000004351PATL19980.674Otolemur_garnettii
ENSACAG00000006607PATL15435.507ENSOGAG00000004709PATL27235.507Otolemur_garnettii
ENSACAG00000006607PATL19978.906ENSOARG00000012005PATL19679.818Ovis_aries
ENSACAG00000006607PATL16634.030ENSOARG00000003762PATL28934.257Ovis_aries
ENSACAG00000006607PATL15936.026ENSPPAG00000007221PATL27936.026Pan_paniscus
ENSACAG00000006607PATL19979.118ENSPPAG00000034275PATL19979.896Pan_paniscus
ENSACAG00000006607PATL15936.069ENSPPRG00000004279PATL28036.069Panthera_pardus
ENSACAG00000006607PATL19979.922ENSPPRG00000020639PATL110080.313Panthera_pardus
ENSACAG00000006607PATL15936.069ENSPTIG00000018964PATL28036.069Panthera_tigris_altaica
ENSACAG00000006607PATL19979.637ENSPTIG00000019298PATL19980.026Panthera_tigris_altaica
ENSACAG00000006607PATL19973.622ENSPTRG00000003697PATL19973.622Pan_troglodytes
ENSACAG00000006607PATL15935.667ENSPTRG00000041536PATL27935.667Pan_troglodytes
ENSACAG00000006607PATL19978.859ENSPANG00000035620PATL19979.637Papio_anubis
ENSACAG00000006607PATL19946.248ENSPKIG00000016224patl19947.087Paramormyrops_kingsleyae
ENSACAG00000006607PATL19830.318ENSPKIG00000016887patl29431.187Paramormyrops_kingsleyae
ENSACAG00000006607PATL15435.461ENSPSIG00000017690PATL29535.697Pelodiscus_sinensis
ENSACAG00000006607PATL19984.047ENSPSIG00000016206PATL19684.047Pelodiscus_sinensis
ENSACAG00000006607PATL15934.801ENSPMGG00000014550patl27234.801Periophthalmus_magnuspinnatus
ENSACAG00000006607PATL18954.654ENSPMGG00000002644patl19945.985Periophthalmus_magnuspinnatus
ENSACAG00000006607PATL16035.169ENSPEMG00000016509Patl28435.593Peromyscus_maniculatus_bairdii
ENSACAG00000006607PATL19979.377ENSPEMG00000014215Patl19980.157Peromyscus_maniculatus_bairdii
ENSACAG00000006607PATL19983.117ENSPCIG00000010852PATL19983.247Phascolarctos_cinereus
ENSACAG00000006607PATL15735.307ENSPCIG00000018256PATL28535.307Phascolarctos_cinereus
ENSACAG00000006607PATL19730.491ENSPFOG00000007305patl29430.491Poecilia_formosa
ENSACAG00000006607PATL19944.630ENSPFOG00000007768patl19946.145Poecilia_formosa
ENSACAG00000006607PATL19730.869ENSPLAG00000020713patl29430.869Poecilia_latipinna
ENSACAG00000006607PATL15552.830ENSPLAG00000018465patl17151.118Poecilia_latipinna
ENSACAG00000006607PATL18149.361ENSPMEG00000006555patl17251.037Poecilia_mexicana
ENSACAG00000006607PATL19730.620ENSPMEG00000018942patl29430.620Poecilia_mexicana
ENSACAG00000006607PATL17347.059ENSPREG00000003874patl17049.476Poecilia_reticulata
ENSACAG00000006607PATL19979.248ENSPPYG00000003230PATL19980.026Pongo_abelii
ENSACAG00000006607PATL15936.026ENSPCOG00000000295PATL29938.082Propithecus_coquereli
ENSACAG00000006607PATL19979.637ENSPCOG00000020770PATL19980.415Propithecus_coquereli
ENSACAG00000006607PATL18575.688ENSPVAG00000015239PATL19976.570Pteropus_vampyrus
ENSACAG00000006607PATL15934.879ENSPNYG00000017381patl26634.802Pundamilia_nyererei
ENSACAG00000006607PATL17852.410ENSPNYG00000018936patl19952.395Pundamilia_nyererei
ENSACAG00000006607PATL19943.952ENSPNAG00000017907patl19945.115Pygocentrus_nattereri
ENSACAG00000006607PATL16236.688ENSPNAG00000002315patl26336.059Pygocentrus_nattereri
ENSACAG00000006607PATL19979.377ENSRNOG00000021052Patl19979.767Rattus_norvegicus
ENSACAG00000006607PATL19969.603ENSRBIG00000032263PATL19969.975Rhinopithecus_bieti
ENSACAG00000006607PATL19978.988ENSRROG00000032861PATL19979.767Rhinopithecus_roxellana
ENSACAG00000006607PATL19978.988ENSSBOG00000025195PATL19979.767Saimiri_boliviensis_boliviensis
ENSACAG00000006607PATL19983.571ENSSHAG00000004309PATL19983.700Sarcophilus_harrisii
ENSACAG00000006607PATL19944.512ENSSFOG00015009614patl19946.220Scleropages_formosus
ENSACAG00000006607PATL18732.938ENSSFOG00015000720patl29530.662Scleropages_formosus
ENSACAG00000006607PATL18965.574ENSSMAG00000009482patl17857.500Scophthalmus_maximus
ENSACAG00000006607PATL16533.267ENSSMAG00000017262patl27433.267Scophthalmus_maximus
ENSACAG00000006607PATL16234.375ENSSDUG00000022927patl26034.375Seriola_dumerili
ENSACAG00000006607PATL18964.407ENSSDUG00000005362patl17564.407Seriola_dumerili
ENSACAG00000006607PATL18962.712ENSSLDG00000019146patl17562.712Seriola_lalandi_dorsalis
ENSACAG00000006607PATL16135.095ENSSLDG00000017922patl26435.095Seriola_lalandi_dorsalis
ENSACAG00000006607PATL18080.226ENSSARG00000009600PATL18081.356Sorex_araneus
ENSACAG00000006607PATL15137.626ENSSARG00000009047PATL27637.626Sorex_araneus
ENSACAG00000006607PATL19987.990ENSSPUG00000009453PATL19987.990Sphenodon_punctatus
ENSACAG00000006607PATL15452.745ENSSPAG00000003187patl19846.287Stegastes_partitus
ENSACAG00000006607PATL16833.710ENSSPAG00000004784patl27433.710Stegastes_partitus
ENSACAG00000006607PATL19979.974ENSSSCG00000013124PATL19980.570Sus_scrofa
ENSACAG00000006607PATL19981.404ENSTGUG00000006222PATL110081.664Taeniopygia_guttata
ENSACAG00000006607PATL15236.207ENSTGUG00000004619-9836.207Taeniopygia_guttata
ENSACAG00000006607PATL16234.519ENSTRUG00000005647patl26234.100Takifugu_rubripes
ENSACAG00000006607PATL19254.237ENSTRUG00000000709patl19944.513Takifugu_rubripes
ENSACAG00000006607PATL19077.209ENSTBEG00000000796PATL19077.907Tupaia_belangeri
ENSACAG00000006607PATL17282.663ENSTTRG00000009389PATL18482.663Tursiops_truncatus
ENSACAG00000006607PATL15436.867ENSUAMG00000018533PATL27834.848Ursus_americanus
ENSACAG00000006607PATL15935.281ENSUMAG00000007738PATL27835.281Ursus_maritimus
ENSACAG00000006607PATL19979.528ENSUMAG00000018634PATL110080.802Ursus_maritimus
ENSACAG00000006607PATL16283.673ENSVPAG00000009224PATL17681.602Vicugna_pacos
ENSACAG00000006607PATL16436.759ENSVVUG00000011576PATL28736.759Vulpes_vulpes
ENSACAG00000006607PATL19979.844ENSVVUG00000016668PATL110080.946Vulpes_vulpes
ENSACAG00000006607PATL15436.298ENSXETG00000014167patl27534.756Xenopus_tropicalis
ENSACAG00000006607PATL16259.649ENSXCOG00000010808patl19859.649Xiphophorus_couchianus
ENSACAG00000006607PATL15936.876ENSXMAG00000018464patl29331.137Xiphophorus_maculatus
ENSACAG00000006607PATL16261.017ENSXMAG00000013834patl17150.877Xiphophorus_maculatus

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