EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000006842 (Gene tree)
Gene ID: 100559858
Gene Symbol: CHD6
Alias: CHD5|FLJ22369|KIAA1335|RIGB|dJ620E11.1
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 69962 bases
Position: chr4:134972594-135042555
Accession: 100559858
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000006684	ResIII	PF04851.15	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000006830	CHD6-201	8154	XM_008110036	ENSACAP00000006684	2717 (aa)	-	G1KFT0

Gene Model

Click here to download ENSACAG00000006842's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000006842's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000006842	CHD6	54	59.017	ENSACAG00000003139	CHD8	59	60.055
ENSACAG00000006842	CHD6	75	62.196	ENSACAG00000016150	CHD9	73	58.726
ENSACAG00000006842	CHD6	76	60.157	ENSACAG00000005760	CHD7	72	63.026

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000006842	CHD6	99	67.931	ENSG00000124177	CHD6	98	79.130	Homo_sapiens
ENSACAG00000006842	CHD6	73	70.033	ENSAPOG00000013736	chd6	64	71.506	Acanthochromis_polyacanthus
ENSACAG00000006842	CHD6	90	76.444	ENSAMEG00000009496	CHD6	91	75.292	Ailuropoda_melanoleuca
ENSACAG00000006842	CHD6	76	69.054	ENSATEG00000005608	chd6	65	69.980	Anabas_testudineus
ENSACAG00000006842	CHD6	99	72.365	ENSAPLG00000015592	CHD6	99	72.584	Anas_platyrhynchos
ENSACAG00000006842	CHD6	77	68.152	ENSAMXG00000009576	chd6	73	68.922	Astyanax_mexicanus
ENSACAG00000006842	CHD6	91	75.557	ENSBTAG00000005733	CHD6	99	66.423	Bos_taurus
ENSACAG00000006842	CHD6	99	68.182	ENSCJAG00000017920	CHD6	99	80.741	Callithrix_jacchus
ENSACAG00000006842	CHD6	99	67.929	ENSCAFG00000009236	CHD6	99	67.311	Canis_familiaris
ENSACAG00000006842	CHD6	99	67.676	ENSCAFG00020012906	CHD6	94	83.041	Canis_lupus_dingo
ENSACAG00000006842	CHD6	99	67.118	ENSCHIG00000017606	CHD6	99	66.508	Capra_hircus
ENSACAG00000006842	CHD6	84	69.277	ENSTSYG00000014635	CHD6	99	69.647	Carlito_syrichta
ENSACAG00000006842	CHD6	99	67.478	ENSCPOG00000015641	CHD6	99	66.933	Cavia_porcellus
ENSACAG00000006842	CHD6	94	73.874	ENSCCAG00000036828	CHD6	99	80.926	Cebus_capucinus
ENSACAG00000006842	CHD6	96	73.729	ENSCATG00000039248	CHD6	99	80.926	Cercocebus_atys
ENSACAG00000006842	CHD6	90	76.395	ENSCLAG00000013743	CHD6	92	75.084	Chinchilla_lanigera
ENSACAG00000006842	CHD6	95	73.888	ENSCSAG00000013997	CHD6	95	72.828	Chlorocebus_sabaeus
ENSACAG00000006842	CHD6	88	74.120	ENSCHOG00000012647	CHD6	92	73.564	Choloepus_hoffmanni
ENSACAG00000006842	CHD6	99	74.679	ENSCPBG00000019382	CHD6	99	75.055	Chrysemys_picta_bellii
ENSACAG00000006842	CHD6	99	67.977	ENSCANG00000043435	CHD6	99	80.926	Colobus_angolensis_palliatus
ENSACAG00000006842	CHD6	99	67.188	ENSCGRG00001002694	Chd6	99	66.837	Cricetulus_griseus_chok1gshd
ENSACAG00000006842	CHD6	78	71.702	ENSDARG00000017244	chd6	74	73.741	Danio_rerio
ENSACAG00000006842	CHD6	99	68.425	ENSDNOG00000004176	CHD6	99	67.568	Dasypus_novemcinctus
ENSACAG00000006842	CHD6	99	67.962	ENSEASG00005023433	CHD6	94	84.990	Equus_asinus_asinus
ENSACAG00000006842	CHD6	99	68.192	ENSECAG00000011761	CHD6	99	67.325	Equus_caballus
ENSACAG00000006842	CHD6	65	75.249	ENSELUG00000012309	chd6	90	75.249	Esox_lucius
ENSACAG00000006842	CHD6	91	76.389	ENSFCAG00000003572	CHD6	91	75.292	Felis_catus
ENSACAG00000006842	CHD6	99	70.609	ENSFALG00000012563	CHD6	98	70.782	Ficedula_albicollis
ENSACAG00000006842	CHD6	89	76.592	ENSFDAG00000013791	CHD6	90	75.531	Fukomys_damarensis
ENSACAG00000006842	CHD6	69	70.579	ENSGMOG00000011715	chd6	80	70.744	Gadus_morhua
ENSACAG00000006842	CHD6	76	68.339	ENSGACG00000000037	chd6	79	70.908	Gasterosteus_aculeatus
ENSACAG00000006842	CHD6	77	68.214	ENSHBUG00000014701	chd6	62	70.159	Haplochromis_burtoni
ENSACAG00000006842	CHD6	99	67.458	ENSHGLG00000004548	CHD6	99	66.654	Heterocephalus_glaber_female
ENSACAG00000006842	CHD6	99	67.458	ENSHGLG00100006401	CHD6	99	66.654	Heterocephalus_glaber_male
ENSACAG00000006842	CHD6	76	72.973	ENSIPUG00000003692	chd6	72	76.789	Ictalurus_punctatus
ENSACAG00000006842	CHD6	90	77.368	ENSSTOG00000013382	CHD6	91	76.304	Ictidomys_tridecemlineatus
ENSACAG00000006842	CHD6	88	72.953	ENSLACG00000010881	CHD6	87	72.023	Latimeria_chalumnae
ENSACAG00000006842	CHD6	70	76.545	ENSLOCG00000007386	chd6	78	74.603	Lepisosteus_oculatus
ENSACAG00000006842	CHD6	99	68.294	ENSLAFG00000012144	CHD6	99	67.687	Loxodonta_africana
ENSACAG00000006842	CHD6	96	73.994	ENSMFAG00000032830	CHD6	99	80.926	Macaca_fascicularis
ENSACAG00000006842	CHD6	96	73.994	ENSMMUG00000020458	CHD6	99	80.926	Macaca_mulatta
ENSACAG00000006842	CHD6	96	73.821	ENSMNEG00000040847	CHD6	99	80.926	Macaca_nemestrina
ENSACAG00000006842	CHD6	97	73.996	ENSMLEG00000031965	CHD6	99	80.926	Mandrillus_leucophaeus
ENSACAG00000006842	CHD6	77	68.726	ENSMAMG00000013111	chd6	63	71.623	Mastacembelus_armatus
ENSACAG00000006842	CHD6	99	71.668	ENSMGAG00000001121	CHD6	99	71.937	Meleagris_gallopavo
ENSACAG00000006842	CHD6	99	67.332	ENSMICG00000016641	CHD6	99	80.741	Microcebus_murinus
ENSACAG00000006842	CHD6	89	70.738	ENSMODG00000000720	-	99	70.977	Monodelphis_domestica
ENSACAG00000006842	CHD6	99	66.908	MGP_CAROLIEiJ_G0024604	Chd6	99	78.428	Mus_caroli
ENSACAG00000006842	CHD6	99	66.751	ENSMUSG00000057133	Chd6	99	78.428	Mus_musculus
ENSACAG00000006842	CHD6	99	66.546	MGP_PahariEiJ_G0026048	Chd6	99	78.595	Mus_pahari
ENSACAG00000006842	CHD6	99	66.859	MGP_SPRETEiJ_G0025526	Chd6	99	78.613	Mus_spretus
ENSACAG00000006842	CHD6	91	76.320	ENSMPUG00000017695	CHD6	99	66.679	Mustela_putorius_furo
ENSACAG00000006842	CHD6	92	76.066	ENSMLUG00000016247	CHD6	92	75.153	Myotis_lucifugus
ENSACAG00000006842	CHD6	77	70.052	ENSNBRG00000013839	chd6	77	72.606	Neolamprologus_brichardi
ENSACAG00000006842	CHD6	95	74.388	ENSNLEG00000006496	CHD6	94	73.220	Nomascus_leucogenys
ENSACAG00000006842	CHD6	80	69.612	ENSONIG00000000393	chd6	79	72.150	Oreochromis_niloticus
ENSACAG00000006842	CHD6	99	62.081	ENSOANG00000014347	CHD6	98	61.884	Ornithorhynchus_anatinus
ENSACAG00000006842	CHD6	95	72.910	ENSOCUG00000012394	CHD6	94	71.958	Oryctolagus_cuniculus
ENSACAG00000006842	CHD6	77	69.940	ENSORLG00020021891	chd6	94	79.150	Oryzias_latipes_hni
ENSACAG00000006842	CHD6	99	67.079	ENSOGAG00000002427	CHD6	99	67.019	Otolemur_garnettii
ENSACAG00000006842	CHD6	99	65.630	ENSOARG00000002597	CHD6	99	64.801	Ovis_aries
ENSACAG00000006842	CHD6	91	76.389	ENSPPRG00000014756	CHD6	91	75.292	Panthera_pardus
ENSACAG00000006842	CHD6	91	76.333	ENSPTIG00000011094	CHD6	91	75.208	Panthera_tigris_altaica
ENSACAG00000006842	CHD6	99	68.177	ENSPTRG00000013504	CHD6	98	80.926	Pan_troglodytes
ENSACAG00000006842	CHD6	96	74.100	ENSPANG00000025554	CHD6	99	81.111	Papio_anubis
ENSACAG00000006842	CHD6	73	76.272	ENSPKIG00000005578	chd6	74	74.000	Paramormyrops_kingsleyae
ENSACAG00000006842	CHD6	74	70.981	ENSPMGG00000014877	chd6	82	73.099	Periophthalmus_magnuspinnatus
ENSACAG00000006842	CHD6	99	69.368	ENSPCIG00000028037	CHD6	99	70.425	Phascolarctos_cinereus
ENSACAG00000006842	CHD6	72	69.291	ENSPLAG00000003128	chd6	63	70.802	Poecilia_latipinna
ENSACAG00000006842	CHD6	73	69.176	ENSPREG00000022653	chd6	98	79.667	Poecilia_reticulata
ENSACAG00000006842	CHD6	97	73.927	ENSPPYG00000011016	CHD6	96	72.867	Pongo_abelii
ENSACAG00000006842	CHD6	99	67.185	ENSPCOG00000001089	CHD6	99	80.741	Propithecus_coquereli
ENSACAG00000006842	CHD6	77	70.592	ENSPNYG00000022516	chd6	77	73.511	Pundamilia_nyererei
ENSACAG00000006842	CHD6	70	70.355	ENSPNAG00000012825	chd6	73	71.939	Pygocentrus_nattereri
ENSACAG00000006842	CHD6	99	66.969	ENSRNOG00000016744	Chd6	99	66.545	Rattus_norvegicus
ENSACAG00000006842	CHD6	99	68.023	ENSSBOG00000022089	CHD6	98	80.926	Saimiri_boliviensis_boliviensis
ENSACAG00000006842	CHD6	99	69.307	ENSSHAG00000017072	CHD6	99	69.565	Sarcophilus_harrisii
ENSACAG00000006842	CHD6	79	70.207	ENSSFOG00015012920	chd6	77	71.476	Scleropages_formosus
ENSACAG00000006842	CHD6	53	96.711	ENSSARG00000002615	-	56	96.711	Sorex_araneus
ENSACAG00000006842	CHD6	91	76.238	ENSSSCG00000007360	CHD6	99	69.708	Sus_scrofa
ENSACAG00000006842	CHD6	96	73.124	ENSTGUG00000003179	CHD6	98	74.184	Taeniopygia_guttata
ENSACAG00000006842	CHD6	72	72.003	ENSTNIG00000017487	chd6	83	71.071	Tetraodon_nigroviridis
ENSACAG00000006842	CHD6	99	65.984	ENSTTRG00000013438	CHD6	99	65.278	Tursiops_truncatus
ENSACAG00000006842	CHD6	99	67.204	ENSUAMG00000024036	CHD6	94	83.041	Ursus_americanus
ENSACAG00000006842	CHD6	90	76.940	ENSUMAG00000002017	CHD6	94	83.041	Ursus_maritimus
ENSACAG00000006842	CHD6	82	73.984	ENSVPAG00000007941	CHD6	83	72.629	Vicugna_pacos
ENSACAG00000006842	CHD6	99	67.993	ENSVVUG00000029164	CHD6	99	67.116	Vulpes_vulpes
ENSACAG00000006842	CHD6	81	69.955	ENSXETG00000021445	chd6	87	67.321	Xenopus_tropicalis