EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000007948 (Gene tree)
Gene ID: 100564042
Gene Symbol: SF3B5
Alias: MGC3133|SF3b10|Ysf3
Full Name: splicing factor 3b subunit 5
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 258 bases
Position: chr1:206065912-206066169
Accession: 100564042
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000007768	SF3b10	PF07189.11	1.2e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000007934	SF3B5-201	258	XM_008122808	ENSACAP00000007768	86 (aa)	XP_008121015	G1KH75

Gene Model

Click here to download ENSACAG00000007948's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000007948's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000007948	SF3B5	100	96.512	ENSG00000169976	SF3B5	100	96.512	Homo_sapiens
ENSACAG00000007948	SF3B5	100	90.698	ENSAPOG00000001721	sf3b5	100	90.698	Acanthochromis_polyacanthus
ENSACAG00000007948	SF3B5	100	93.023	ENSACIG00000008106	sf3b5	100	93.023	Amphilophus_citrinellus
ENSACAG00000007948	SF3B5	100	90.698	ENSAOCG00000023367	sf3b5	100	90.698	Amphiprion_ocellaris
ENSACAG00000007948	SF3B5	100	90.698	ENSAPEG00000004605	sf3b5	100	90.698	Amphiprion_percula
ENSACAG00000007948	SF3B5	100	91.860	ENSATEG00000009720	sf3b5	100	91.860	Anabas_testudineus
ENSACAG00000007948	SF3B5	100	96.512	ENSANAG00000019999	SF3B5	100	96.512	Aotus_nancymaae
ENSACAG00000007948	SF3B5	100	93.023	ENSACLG00000022410	sf3b5	100	93.023	Astatotilapia_calliptera
ENSACAG00000007948	SF3B5	100	96.512	ENSBTAG00000009795	SF3B5	100	96.512	Bos_taurus
ENSACAG00000007948	SF3B5	100	96.512	ENSCJAG00000046566	SF3B5	100	96.512	Callithrix_jacchus
ENSACAG00000007948	SF3B5	100	96.512	ENSCAFG00000032495	SF3B5	100	96.512	Canis_familiaris
ENSACAG00000007948	SF3B5	100	96.512	ENSCAFG00020000873	SF3B5	100	96.512	Canis_lupus_dingo
ENSACAG00000007948	SF3B5	100	96.512	ENSCHIG00000007987	SF3B5	100	96.512	Capra_hircus
ENSACAG00000007948	SF3B5	100	96.512	ENSTSYG00000012236	SF3B5	100	96.512	Carlito_syrichta
ENSACAG00000007948	SF3B5	100	96.512	ENSCPOG00000012435	SF3B5	100	96.512	Cavia_porcellus
ENSACAG00000007948	SF3B5	100	96.512	ENSCCAG00000006528	SF3B5	100	96.512	Cebus_capucinus
ENSACAG00000007948	SF3B5	100	96.512	ENSCATG00000010192	SF3B5	100	96.512	Cercocebus_atys
ENSACAG00000007948	SF3B5	100	96.512	ENSCLAG00000017802	SF3B5	100	96.512	Chinchilla_lanigera
ENSACAG00000007948	SF3B5	100	96.512	ENSCSAG00000000187	SF3B5	100	96.512	Chlorocebus_sabaeus
ENSACAG00000007948	SF3B5	100	97.674	ENSCPBG00000017148	SF3B5	100	97.674	Chrysemys_picta_bellii
ENSACAG00000007948	SF3B5	98	73.810	ENSCING00000021953	-	98	73.810	Ciona_intestinalis
ENSACAG00000007948	SF3B5	100	96.512	ENSCANG00000002639	SF3B5	100	96.512	Colobus_angolensis_palliatus
ENSACAG00000007948	SF3B5	100	95.349	ENSCGRG00001007249	Sf3b5	100	95.349	Cricetulus_griseus_chok1gshd
ENSACAG00000007948	SF3B5	100	95.349	ENSCGRG00000019185	Sf3b5	100	95.349	Cricetulus_griseus_crigri
ENSACAG00000007948	SF3B5	100	93.023	ENSCSEG00000003216	sf3b5	100	93.023	Cynoglossus_semilaevis
ENSACAG00000007948	SF3B5	100	91.860	ENSCVAG00000005040	sf3b5	100	91.860	Cyprinodon_variegatus
ENSACAG00000007948	SF3B5	100	91.860	ENSDARG00000016855	sf3b5	100	91.860	Danio_rerio
ENSACAG00000007948	SF3B5	100	96.512	ENSDNOG00000048829	SF3B5	82	96.512	Dasypus_novemcinctus
ENSACAG00000007948	SF3B5	100	96.512	ENSDORG00000005838	Sf3b5	100	96.512	Dipodomys_ordii
ENSACAG00000007948	SF3B5	95	84.146	FBgn0040534	Sf3b5	96	84.146	Drosophila_melanogaster
ENSACAG00000007948	SF3B5	100	96.512	ENSETEG00000004047	SF3B5	100	96.512	Echinops_telfairi
ENSACAG00000007948	SF3B5	99	83.529	ENSEBUG00000002311	sf3b5	100	83.529	Eptatretus_burgeri
ENSACAG00000007948	SF3B5	100	96.512	ENSEASG00005009522	SF3B5	100	96.512	Equus_asinus_asinus
ENSACAG00000007948	SF3B5	100	96.512	ENSECAG00000005457	SF3B5	100	96.512	Equus_caballus
ENSACAG00000007948	SF3B5	100	90.698	ENSELUG00000014290	SF3B5	100	90.698	Esox_lucius
ENSACAG00000007948	SF3B5	100	96.512	ENSFCAG00000000936	SF3B5	100	96.512	Felis_catus
ENSACAG00000007948	SF3B5	100	96.512	ENSFALG00000015012	SF3B5	100	96.512	Ficedula_albicollis
ENSACAG00000007948	SF3B5	100	96.512	ENSFDAG00000003664	SF3B5	100	96.512	Fukomys_damarensis
ENSACAG00000007948	SF3B5	100	91.860	ENSFHEG00000020301	sf3b5	100	91.860	Fundulus_heteroclitus
ENSACAG00000007948	SF3B5	100	91.860	ENSGMOG00000019972	sf3b5	100	91.860	Gadus_morhua
ENSACAG00000007948	SF3B5	100	98.837	ENSGALG00000030824	SF3B5	100	98.837	Gallus_gallus
ENSACAG00000007948	SF3B5	100	91.860	ENSGAFG00000000271	sf3b5	100	91.860	Gambusia_affinis
ENSACAG00000007948	SF3B5	100	91.860	ENSGACG00000010363	sf3b5	100	91.860	Gasterosteus_aculeatus
ENSACAG00000007948	SF3B5	100	91.860	ENSGAGG00000000646	-	100	91.860	Gopherus_agassizii
ENSACAG00000007948	SF3B5	100	97.674	ENSGAGG00000011434	SF3B5	100	97.674	Gopherus_agassizii
ENSACAG00000007948	SF3B5	100	96.512	ENSGGOG00000001537	SF3B5	100	96.512	Gorilla_gorilla
ENSACAG00000007948	SF3B5	100	93.023	ENSHBUG00000008925	sf3b5	100	93.023	Haplochromis_burtoni
ENSACAG00000007948	SF3B5	100	96.512	ENSHGLG00000021406	SF3B5	100	96.512	Heterocephalus_glaber_female
ENSACAG00000007948	SF3B5	100	96.512	ENSHGLG00100020370	SF3B5	100	96.512	Heterocephalus_glaber_male
ENSACAG00000007948	SF3B5	100	90.698	ENSHCOG00000009115	-	100	90.698	Hippocampus_comes
ENSACAG00000007948	SF3B5	100	90.698	ENSHCOG00000016802	sf3b5	100	90.698	Hippocampus_comes
ENSACAG00000007948	SF3B5	100	90.698	ENSHCOG00000016806	sf3b5	100	90.698	Hippocampus_comes
ENSACAG00000007948	SF3B5	100	91.860	ENSIPUG00000015166	sf3b5	100	91.860	Ictalurus_punctatus
ENSACAG00000007948	SF3B5	100	96.512	ENSSTOG00000003347	SF3B5	100	96.512	Ictidomys_tridecemlineatus
ENSACAG00000007948	SF3B5	100	96.512	ENSJJAG00000001857	Sf3b5	100	96.512	Jaculus_jaculus
ENSACAG00000007948	SF3B5	100	91.860	ENSKMAG00000002249	sf3b5	100	91.860	Kryptolebias_marmoratus
ENSACAG00000007948	SF3B5	100	91.860	ENSLBEG00000019847	sf3b5	100	91.860	Labrus_bergylta
ENSACAG00000007948	SF3B5	100	94.186	ENSLACG00000000946	SF3B5	100	94.186	Latimeria_chalumnae
ENSACAG00000007948	SF3B5	100	93.023	ENSLOCG00000017352	sf3b5	100	93.023	Lepisosteus_oculatus
ENSACAG00000007948	SF3B5	100	96.512	ENSLAFG00000032489	SF3B5	100	96.512	Loxodonta_africana
ENSACAG00000007948	SF3B5	100	96.512	ENSMFAG00000029753	SF3B5	100	96.512	Macaca_fascicularis
ENSACAG00000007948	SF3B5	100	96.512	ENSMMUG00000047691	SF3B5	100	96.512	Macaca_mulatta
ENSACAG00000007948	SF3B5	100	96.512	ENSMNEG00000028236	SF3B5	100	96.512	Macaca_nemestrina
ENSACAG00000007948	SF3B5	100	96.512	ENSMLEG00000007622	SF3B5	100	96.512	Mandrillus_leucophaeus
ENSACAG00000007948	SF3B5	100	93.023	ENSMAMG00000021639	sf3b5	100	93.023	Mastacembelus_armatus
ENSACAG00000007948	SF3B5	100	82.558	ENSMZEG00005027407	sf3b5	100	82.558	Maylandia_zebra
ENSACAG00000007948	SF3B5	100	93.023	ENSMZEG00005027408	sf3b5	100	93.023	Maylandia_zebra
ENSACAG00000007948	SF3B5	100	93.023	ENSMZEG00005028115	SF3B5	100	93.023	Maylandia_zebra
ENSACAG00000007948	SF3B5	100	98.837	ENSMGAG00000015849	SF3B5	100	98.837	Meleagris_gallopavo
ENSACAG00000007948	SF3B5	100	95.349	ENSMAUG00000008283	Sf3b5	100	95.349	Mesocricetus_auratus
ENSACAG00000007948	SF3B5	100	96.512	ENSMICG00000014922	SF3B5	100	96.512	Microcebus_murinus
ENSACAG00000007948	SF3B5	100	95.349	ENSMOCG00000001713	Sf3b5	100	95.349	Microtus_ochrogaster
ENSACAG00000007948	SF3B5	100	93.023	ENSMMOG00000007956	sf3b5	100	93.023	Mola_mola
ENSACAG00000007948	SF3B5	100	96.512	ENSMODG00000023291	SF3B5	83	96.512	Monodelphis_domestica
ENSACAG00000007948	SF3B5	91	90.123	ENSMALG00000020357	sf3b5	99	90.123	Monopterus_albus
ENSACAG00000007948	SF3B5	100	95.349	MGP_CAROLIEiJ_G0015120	Sf3b5	100	95.349	Mus_caroli
ENSACAG00000007948	SF3B5	100	95.349	ENSMUSG00000078348	Sf3b5	100	95.349	Mus_musculus
ENSACAG00000007948	SF3B5	100	95.349	MGP_PahariEiJ_G0023739	Sf3b5	100	95.349	Mus_pahari
ENSACAG00000007948	SF3B5	100	95.349	MGP_SPRETEiJ_G0015928	Sf3b5	100	95.349	Mus_spretus
ENSACAG00000007948	SF3B5	100	96.512	ENSMPUG00000018379	SF3B5	100	96.512	Mustela_putorius_furo
ENSACAG00000007948	SF3B5	100	91.860	ENSMLUG00000010802	-	100	91.860	Myotis_lucifugus
ENSACAG00000007948	SF3B5	93	93.750	ENSMLUG00000025546	-	93	93.750	Myotis_lucifugus
ENSACAG00000007948	SF3B5	100	96.512	ENSMLUG00000028504	-	100	96.512	Myotis_lucifugus
ENSACAG00000007948	SF3B5	100	96.512	ENSNGAG00000010732	Sf3b5	100	96.512	Nannospalax_galili
ENSACAG00000007948	SF3B5	100	93.023	ENSNBRG00000014383	sf3b5	100	93.023	Neolamprologus_brichardi
ENSACAG00000007948	SF3B5	100	96.512	ENSNLEG00000019307	SF3B5	100	96.512	Nomascus_leucogenys
ENSACAG00000007948	SF3B5	100	96.512	ENSMEUG00000005445	-	100	96.512	Notamacropus_eugenii
ENSACAG00000007948	SF3B5	100	96.512	ENSMEUG00000005440	-	100	96.512	Notamacropus_eugenii
ENSACAG00000007948	SF3B5	100	97.674	ENSOPRG00000015107	SF3B5	100	97.674	Ochotona_princeps
ENSACAG00000007948	SF3B5	100	96.512	ENSODEG00000019507	SF3B5	100	96.512	Octodon_degus
ENSACAG00000007948	SF3B5	100	93.023	ENSONIG00000020725	sf3b5	100	93.023	Oreochromis_niloticus
ENSACAG00000007948	SF3B5	69	94.915	ENSOANG00000015301	SF3B5	97	94.915	Ornithorhynchus_anatinus
ENSACAG00000007948	SF3B5	100	96.512	ENSOCUG00000008752	SF3B5	100	96.512	Oryctolagus_cuniculus
ENSACAG00000007948	SF3B5	100	94.186	ENSORLG00000004925	sf3b5	100	94.186	Oryzias_latipes
ENSACAG00000007948	SF3B5	100	94.186	ENSORLG00020011625	sf3b5	100	94.186	Oryzias_latipes_hni
ENSACAG00000007948	SF3B5	100	94.186	ENSORLG00015017061	sf3b5	100	94.186	Oryzias_latipes_hsok
ENSACAG00000007948	SF3B5	100	94.186	ENSOMEG00000010620	sf3b5	100	94.186	Oryzias_melastigma
ENSACAG00000007948	SF3B5	100	96.512	ENSOGAG00000012152	SF3B5	100	96.512	Otolemur_garnettii
ENSACAG00000007948	SF3B5	92	98.734	ENSOARG00000019486	-	95	98.734	Ovis_aries
ENSACAG00000007948	SF3B5	100	94.186	ENSOARG00000002617	SF3B5	100	94.186	Ovis_aries
ENSACAG00000007948	SF3B5	100	96.512	ENSPPAG00000012940	SF3B5	100	96.512	Pan_paniscus
ENSACAG00000007948	SF3B5	100	96.512	ENSPPRG00000021262	SF3B5	100	96.512	Panthera_pardus
ENSACAG00000007948	SF3B5	100	96.512	ENSPTIG00000001952	SF3B5	100	96.512	Panthera_tigris_altaica
ENSACAG00000007948	SF3B5	100	96.512	ENSPTRG00000018676	SF3B5	100	96.512	Pan_troglodytes
ENSACAG00000007948	SF3B5	100	96.512	ENSPANG00000034242	SF3B5	100	96.512	Papio_anubis
ENSACAG00000007948	SF3B5	100	93.023	ENSPKIG00000006057	sf3b5	100	93.023	Paramormyrops_kingsleyae
ENSACAG00000007948	SF3B5	100	97.674	ENSPSIG00000001262	SF3B5	100	97.674	Pelodiscus_sinensis
ENSACAG00000007948	SF3B5	100	90.698	ENSPMGG00000014804	sf3b5	100	90.698	Periophthalmus_magnuspinnatus
ENSACAG00000007948	SF3B5	100	95.349	ENSPEMG00000012931	Sf3b5	100	95.349	Peromyscus_maniculatus_bairdii
ENSACAG00000007948	SF3B5	100	87.209	ENSPMAG00000010296	sf3b5	100	87.209	Petromyzon_marinus
ENSACAG00000007948	SF3B5	93	98.750	ENSPCIG00000011344	-	78	98.750	Phascolarctos_cinereus
ENSACAG00000007948	SF3B5	100	75.581	ENSPCIG00000025007	-	100	75.581	Phascolarctos_cinereus
ENSACAG00000007948	SF3B5	100	91.860	ENSPFOG00000019994	sf3b5	100	91.860	Poecilia_formosa
ENSACAG00000007948	SF3B5	100	91.860	ENSPLAG00000008412	sf3b5	100	91.860	Poecilia_latipinna
ENSACAG00000007948	SF3B5	100	91.860	ENSPMEG00000020050	sf3b5	100	91.860	Poecilia_mexicana
ENSACAG00000007948	SF3B5	100	91.860	ENSPREG00000009242	sf3b5	100	91.860	Poecilia_reticulata
ENSACAG00000007948	SF3B5	100	96.512	ENSPPYG00000017068	SF3B5	100	96.512	Pongo_abelii
ENSACAG00000007948	SF3B5	100	96.512	ENSPCAG00000009332	SF3B5	100	96.512	Procavia_capensis
ENSACAG00000007948	SF3B5	100	96.512	ENSPCOG00000013754	SF3B5	100	96.512	Propithecus_coquereli
ENSACAG00000007948	SF3B5	56	100.000	ENSPVAG00000002820	SF3B5	100	100.000	Pteropus_vampyrus
ENSACAG00000007948	SF3B5	100	93.023	ENSPNYG00000002075	sf3b5	100	93.023	Pundamilia_nyererei
ENSACAG00000007948	SF3B5	100	93.023	ENSPNAG00000004942	sf3b5	100	93.023	Pygocentrus_nattereri
ENSACAG00000007948	SF3B5	100	95.349	ENSRNOG00000014908	Sf3b5	100	95.349	Rattus_norvegicus
ENSACAG00000007948	SF3B5	100	96.512	ENSRBIG00000006301	SF3B5	100	96.512	Rhinopithecus_bieti
ENSACAG00000007948	SF3B5	100	96.512	ENSRROG00000037067	SF3B5	100	96.512	Rhinopithecus_roxellana
ENSACAG00000007948	SF3B5	100	96.512	ENSSBOG00000006122	SF3B5	100	96.512	Saimiri_boliviensis_boliviensis
ENSACAG00000007948	SF3B5	100	95.349	ENSSHAG00000015670	SF3B5	100	95.349	Sarcophilus_harrisii
ENSACAG00000007948	SF3B5	100	94.186	ENSSFOG00015015767	sf3b5	100	94.186	Scleropages_formosus
ENSACAG00000007948	SF3B5	100	90.698	ENSSMAG00000018852	sf3b5	100	90.698	Scophthalmus_maximus
ENSACAG00000007948	SF3B5	100	91.860	ENSSDUG00000018161	sf3b5	100	91.860	Seriola_dumerili
ENSACAG00000007948	SF3B5	100	91.860	ENSSLDG00000014547	sf3b5	100	91.860	Seriola_lalandi_dorsalis
ENSACAG00000007948	SF3B5	100	96.512	ENSSARG00000007820	SF3B5	100	96.512	Sorex_araneus
ENSACAG00000007948	SF3B5	100	90.698	ENSSPAG00000017371	-	100	90.698	Stegastes_partitus
ENSACAG00000007948	SF3B5	100	90.698	ENSSPAG00000009244	sf3b5	100	90.698	Stegastes_partitus
ENSACAG00000007948	SF3B5	100	96.512	ENSSSCG00000035578	SF3B5	100	96.512	Sus_scrofa
ENSACAG00000007948	SF3B5	100	98.837	ENSTGUG00000010810	SF3B5	100	98.837	Taeniopygia_guttata
ENSACAG00000007948	SF3B5	100	91.860	ENSTRUG00000005577	sf3b5	100	91.860	Takifugu_rubripes
ENSACAG00000007948	SF3B5	100	91.860	ENSTNIG00000001265	sf3b5	100	91.860	Tetraodon_nigroviridis
ENSACAG00000007948	SF3B5	100	95.349	ENSTBEG00000003072	SF3B5	100	95.349	Tupaia_belangeri
ENSACAG00000007948	SF3B5	100	96.512	ENSTTRG00000008817	SF3B5	100	96.512	Tursiops_truncatus
ENSACAG00000007948	SF3B5	100	96.512	ENSUAMG00000027296	SF3B5	100	96.512	Ursus_americanus
ENSACAG00000007948	SF3B5	100	96.512	ENSUMAG00000005448	SF3B5	100	96.512	Ursus_maritimus
ENSACAG00000007948	SF3B5	100	96.512	ENSVPAG00000003826	SF3B5	100	96.512	Vicugna_pacos
ENSACAG00000007948	SF3B5	100	96.512	ENSVVUG00000004703	SF3B5	100	96.512	Vulpes_vulpes
ENSACAG00000007948	SF3B5	100	96.512	ENSXETG00000021409	sf3b5	100	96.512	Xenopus_tropicalis
ENSACAG00000007948	SF3B5	100	91.860	ENSXMAG00000019971	sf3b5	100	91.860	Xiphophorus_maculatus