EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000008099 (Gene tree)
Gene ID: 100554177
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 8107 bases
Position: chrGL343220.1:1204334-1212440
Accession: 100554177
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000007925	Exo_endo_phos	PF03372.23	4.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000008092	APEX1-201	5283	XM_008115375	ENSACAP00000007925	317 (aa)	XP_008113582	H9GDG2

Gene Model

Click here to download ENSACAG00000008099's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000008099's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000008099	APEX1	100	69.255	ENSG00000100823	APEX1	100	69.255	Homo_sapiens
ENSACAG00000008099	APEX1	88	70.714	ENSAPOG00000017002	apex1	92	70.714	Acanthochromis_polyacanthus
ENSACAG00000008099	APEX1	100	70.186	ENSAMEG00000005418	APEX1	100	70.186	Ailuropoda_melanoleuca
ENSACAG00000008099	APEX1	87	74.729	ENSACIG00000010653	apex1	95	74.286	Amphilophus_citrinellus
ENSACAG00000008099	APEX1	88	71.429	ENSAOCG00000009649	apex1	91	71.429	Amphiprion_ocellaris
ENSACAG00000008099	APEX1	88	71.071	ENSAPEG00000021453	apex1	91	71.071	Amphiprion_percula
ENSACAG00000008099	APEX1	86	72.628	ENSATEG00000002883	apex1	88	72.043	Anabas_testudineus
ENSACAG00000008099	APEX1	100	70.807	ENSANAG00000030117	APEX1	100	70.807	Aotus_nancymaae
ENSACAG00000008099	APEX1	87	74.909	ENSACLG00000018441	apex1	99	70.159	Astatotilapia_calliptera
ENSACAG00000008099	APEX1	100	70.032	ENSAMXG00000034699	apex1	100	69.085	Astyanax_mexicanus
ENSACAG00000008099	APEX1	100	69.255	ENSBTAG00000002745	APEX1	100	69.255	Bos_taurus
ENSACAG00000008099	APEX1	89	43.357	WBGene00001372	exo-3	88	46.275	Caenorhabditis_elegans
ENSACAG00000008099	APEX1	100	70.497	ENSCJAG00000009726	APEX1	100	70.497	Callithrix_jacchus
ENSACAG00000008099	APEX1	100	70.186	ENSCAFG00000032033	APEX1	100	70.186	Canis_familiaris
ENSACAG00000008099	APEX1	54	62.500	ENSCAFG00020023002	-	96	62.500	Canis_lupus_dingo
ENSACAG00000008099	APEX1	100	70.186	ENSCAFG00020014377	-	100	70.186	Canis_lupus_dingo
ENSACAG00000008099	APEX1	85	58.672	ENSCHIG00000014537	-	86	58.672	Capra_hircus
ENSACAG00000008099	APEX1	100	69.255	ENSCHIG00000007298	-	100	69.255	Capra_hircus
ENSACAG00000008099	APEX1	100	69.565	ENSTSYG00000034813	APEX1	100	69.565	Carlito_syrichta
ENSACAG00000008099	APEX1	85	66.788	ENSCAPG00000016235	APEX1	92	73.529	Cavia_aperea
ENSACAG00000008099	APEX1	100	70.497	ENSCPOG00000030909	APEX1	100	70.497	Cavia_porcellus
ENSACAG00000008099	APEX1	100	60.681	ENSCCAG00000031931	-	100	60.681	Cebus_capucinus
ENSACAG00000008099	APEX1	100	70.497	ENSCCAG00000033056	-	100	70.497	Cebus_capucinus
ENSACAG00000008099	APEX1	100	69.876	ENSCATG00000015580	APEX1	100	69.876	Cercocebus_atys
ENSACAG00000008099	APEX1	100	70.186	ENSCLAG00000001002	APEX1	100	70.186	Chinchilla_lanigera
ENSACAG00000008099	APEX1	100	70.186	ENSCSAG00000016670	-	100	70.186	Chlorocebus_sabaeus
ENSACAG00000008099	APEX1	100	70.186	ENSCSAG00000016685	-	100	70.186	Chlorocebus_sabaeus
ENSACAG00000008099	APEX1	100	76.489	ENSCPBG00000009567	APEX1	100	76.489	Chrysemys_picta_bellii
ENSACAG00000008099	APEX1	99	55.031	ENSCING00000008137	-	85	60.674	Ciona_intestinalis
ENSACAG00000008099	APEX1	99	50.637	ENSCSAVG00000007144	-	100	56.589	Ciona_savignyi
ENSACAG00000008099	APEX1	100	70.186	ENSCANG00000030726	APEX1	100	70.186	Colobus_angolensis_palliatus
ENSACAG00000008099	APEX1	100	69.159	ENSCGRG00001017046	Apex1	100	69.159	Cricetulus_griseus_chok1gshd
ENSACAG00000008099	APEX1	100	69.159	ENSCGRG00000008984	Apex1	100	69.159	Cricetulus_griseus_crigri
ENSACAG00000008099	APEX1	99	65.714	ENSCSEG00000017499	apex1	99	65.397	Cynoglossus_semilaevis
ENSACAG00000008099	APEX1	88	73.214	ENSCVAG00000022075	apex1	90	73.214	Cyprinodon_variegatus
ENSACAG00000008099	APEX1	100	71.924	ENSDARG00000045843	apex1	100	72.414	Danio_rerio
ENSACAG00000008099	APEX1	100	66.460	ENSDNOG00000042234	APEX1	95	66.460	Dasypus_novemcinctus
ENSACAG00000008099	APEX1	100	69.876	ENSDORG00000001616	Apex1	100	69.876	Dipodomys_ordii
ENSACAG00000008099	APEX1	100	70.186	ENSETEG00000004855	-	100	70.186	Echinops_telfairi
ENSACAG00000008099	APEX1	75	61.345	ENSEBUG00000000622	-	92	61.345	Eptatretus_burgeri
ENSACAG00000008099	APEX1	100	70.497	ENSEASG00005017489	APEX1	74	70.497	Equus_asinus_asinus
ENSACAG00000008099	APEX1	100	70.497	ENSECAG00000022325	APEX1	82	70.497	Equus_caballus
ENSACAG00000008099	APEX1	85	70.370	ENSEEUG00000012569	APEX1	94	70.370	Erinaceus_europaeus
ENSACAG00000008099	APEX1	87	72.101	ENSELUG00000021706	apex1	100	66.246	Esox_lucius
ENSACAG00000008099	APEX1	100	71.118	ENSFCAG00000030869	APEX1	100	71.118	Felis_catus
ENSACAG00000008099	APEX1	100	70.497	ENSFDAG00000006120	APEX1	100	70.497	Fukomys_damarensis
ENSACAG00000008099	APEX1	99	68.139	ENSFHEG00000009031	apex1	83	67.937	Fundulus_heteroclitus
ENSACAG00000008099	APEX1	99	65.714	ENSGMOG00000007943	apex1	90	67.857	Gadus_morhua
ENSACAG00000008099	APEX1	88	73.214	ENSGAFG00000005311	apex1	90	73.214	Gambusia_affinis
ENSACAG00000008099	APEX1	99	69.182	ENSGACG00000019497	apex1	99	72.932	Gasterosteus_aculeatus
ENSACAG00000008099	APEX1	100	76.176	ENSGAGG00000014999	APEX1	100	76.176	Gopherus_agassizii
ENSACAG00000008099	APEX1	100	69.255	ENSGGOG00000002128	APEX1	100	69.255	Gorilla_gorilla
ENSACAG00000008099	APEX1	87	74.545	ENSHBUG00000005894	apex1	99	70.159	Haplochromis_burtoni
ENSACAG00000008099	APEX1	100	71.118	ENSHGLG00000002848	APEX1	100	71.118	Heterocephalus_glaber_female
ENSACAG00000008099	APEX1	100	71.118	ENSHGLG00100017878	APEX1	100	71.118	Heterocephalus_glaber_male
ENSACAG00000008099	APEX1	99	69.841	ENSHCOG00000009961	apex1	99	68.438	Hippocampus_comes
ENSACAG00000008099	APEX1	100	70.662	ENSIPUG00000005799	apex1	100	69.716	Ictalurus_punctatus
ENSACAG00000008099	APEX1	100	69.876	ENSSTOG00000010096	APEX1	100	69.876	Ictidomys_tridecemlineatus
ENSACAG00000008099	APEX1	100	61.491	ENSJJAG00000003660	-	100	61.491	Jaculus_jaculus
ENSACAG00000008099	APEX1	95	63.036	ENSJJAG00000020465	-	90	63.929	Jaculus_jaculus
ENSACAG00000008099	APEX1	100	68.944	ENSJJAG00000012067	-	100	68.944	Jaculus_jaculus
ENSACAG00000008099	APEX1	88	73.214	ENSKMAG00000021171	apex1	99	68.889	Kryptolebias_marmoratus
ENSACAG00000008099	APEX1	88	71.786	ENSLBEG00000010248	apex1	90	71.786	Labrus_bergylta
ENSACAG00000008099	APEX1	100	72.555	ENSLACG00000008617	APEX1	100	72.240	Latimeria_chalumnae
ENSACAG00000008099	APEX1	100	71.250	ENSLOCG00000015516	apex1	99	70.000	Lepisosteus_oculatus
ENSACAG00000008099	APEX1	100	69.688	ENSLAFG00000021872	APEX1	100	67.913	Loxodonta_africana
ENSACAG00000008099	APEX1	100	69.876	ENSMFAG00000002565	APEX1	100	69.876	Macaca_fascicularis
ENSACAG00000008099	APEX1	100	69.876	ENSMMUG00000048039	APEX1	100	69.876	Macaca_mulatta
ENSACAG00000008099	APEX1	100	70.186	ENSMNEG00000036944	APEX1	100	70.186	Macaca_nemestrina
ENSACAG00000008099	APEX1	100	69.876	ENSMLEG00000042125	APEX1	100	69.876	Mandrillus_leucophaeus
ENSACAG00000008099	APEX1	99	68.239	ENSMAMG00000023526	apex1	99	68.239	Mastacembelus_armatus
ENSACAG00000008099	APEX1	87	74.909	ENSMZEG00005014187	apex1	99	70.159	Maylandia_zebra
ENSACAG00000008099	APEX1	100	69.470	ENSMAUG00000013994	Apex1	100	68.750	Mesocricetus_auratus
ENSACAG00000008099	APEX1	100	70.186	ENSMICG00000043554	APEX1	100	70.186	Microcebus_murinus
ENSACAG00000008099	APEX1	100	69.159	ENSMOCG00000013721	Apex1	100	69.159	Microtus_ochrogaster
ENSACAG00000008099	APEX1	88	70.463	ENSMMOG00000010031	apex1	88	70.463	Mola_mola
ENSACAG00000008099	APEX1	100	68.438	ENSMODG00000007125	APEX1	100	68.438	Monodelphis_domestica
ENSACAG00000008099	APEX1	88	67.500	ENSMALG00000011699	apex1	75	67.500	Monopterus_albus
ENSACAG00000008099	APEX1	99	70.625	MGP_CAROLIEiJ_G0019209	Apex1	99	70.625	Mus_caroli
ENSACAG00000008099	APEX1	100	70.093	ENSMUSG00000035960	Apex1	100	70.093	Mus_musculus
ENSACAG00000008099	APEX1	100	68.652	MGP_PahariEiJ_G0030232	Apex1	100	70.405	Mus_pahari
ENSACAG00000008099	APEX1	100	70.093	MGP_SPRETEiJ_G0020101	Apex1	100	70.093	Mus_spretus
ENSACAG00000008099	APEX1	100	69.444	ENSMLUG00000028957	APEX1	100	67.500	Myotis_lucifugus
ENSACAG00000008099	APEX1	100	71.118	ENSNGAG00000002725	-	100	71.118	Nannospalax_galili
ENSACAG00000008099	APEX1	88	57.951	ENSNGAG00000021748	-	86	57.951	Nannospalax_galili
ENSACAG00000008099	APEX1	87	74.909	ENSNBRG00000005334	apex1	91	70.159	Neolamprologus_brichardi
ENSACAG00000008099	APEX1	100	69.255	ENSNLEG00000010839	APEX1	100	69.255	Nomascus_leucogenys
ENSACAG00000008099	APEX1	100	67.610	ENSMEUG00000014519	APEX1	100	66.352	Notamacropus_eugenii
ENSACAG00000008099	APEX1	100	69.565	ENSOPRG00000014029	APEX1	100	68.847	Ochotona_princeps
ENSACAG00000008099	APEX1	97	54.808	ENSODEG00000004777	-	83	60.317	Octodon_degus
ENSACAG00000008099	APEX1	100	53.963	ENSODEG00000006583	-	100	52.454	Octodon_degus
ENSACAG00000008099	APEX1	100	70.186	ENSODEG00000001703	-	100	70.186	Octodon_degus
ENSACAG00000008099	APEX1	87	75.090	ENSONIG00000012089	apex1	99	70.476	Oreochromis_niloticus
ENSACAG00000008099	APEX1	90	71.930	ENSOANG00000008836	APEX1	80	67.178	Ornithorhynchus_anatinus
ENSACAG00000008099	APEX1	100	70.497	ENSOCUG00000005022	APEX1	100	70.497	Oryctolagus_cuniculus
ENSACAG00000008099	APEX1	99	68.571	ENSORLG00000012378	apex1	99	68.571	Oryzias_latipes
ENSACAG00000008099	APEX1	99	68.571	ENSORLG00020021371	apex1	99	68.571	Oryzias_latipes_hni
ENSACAG00000008099	APEX1	99	68.571	ENSORLG00015020089	apex1	99	68.571	Oryzias_latipes_hsok
ENSACAG00000008099	APEX1	99	69.524	ENSOMEG00000018876	apex1	99	69.524	Oryzias_melastigma
ENSACAG00000008099	APEX1	93	63.880	ENSOGAG00000029355	-	95	63.880	Otolemur_garnettii
ENSACAG00000008099	APEX1	100	70.186	ENSOGAG00000013335	-	100	70.186	Otolemur_garnettii
ENSACAG00000008099	APEX1	97	66.667	ENSOARG00000001876	-	100	66.667	Ovis_aries
ENSACAG00000008099	APEX1	100	68.944	ENSOARG00000019740	-	100	68.944	Ovis_aries
ENSACAG00000008099	APEX1	97	59.547	ENSOARG00000014424	-	97	57.282	Ovis_aries
ENSACAG00000008099	APEX1	100	69.565	ENSPPAG00000038760	APEX1	100	69.565	Pan_paniscus
ENSACAG00000008099	APEX1	100	70.807	ENSPPRG00000011794	APEX1	100	70.807	Panthera_pardus
ENSACAG00000008099	APEX1	100	71.118	ENSPTIG00000014829	APEX1	100	71.118	Panthera_tigris_altaica
ENSACAG00000008099	APEX1	100	69.565	ENSPTRG00000006093	APEX1	100	69.565	Pan_troglodytes
ENSACAG00000008099	APEX1	100	69.876	ENSPANG00000022757	APEX1	100	69.876	Papio_anubis
ENSACAG00000008099	APEX1	87	74.638	ENSPKIG00000003504	apex1	100	67.683	Paramormyrops_kingsleyae
ENSACAG00000008099	APEX1	74	74.043	ENSPMGG00000016596	apex1	71	74.043	Periophthalmus_magnuspinnatus
ENSACAG00000008099	APEX1	100	70.405	ENSPEMG00000019097	Apex1	100	70.405	Peromyscus_maniculatus_bairdii
ENSACAG00000008099	APEX1	94	70.470	ENSPMAG00000007275	-	95	71.071	Petromyzon_marinus
ENSACAG00000008099	APEX1	88	69.643	ENSPCIG00000023274	APEX1	100	66.875	Phascolarctos_cinereus
ENSACAG00000008099	APEX1	88	72.500	ENSPFOG00000004178	apex1	90	72.500	Poecilia_formosa
ENSACAG00000008099	APEX1	88	72.143	ENSPLAG00000012779	apex1	90	72.143	Poecilia_latipinna
ENSACAG00000008099	APEX1	88	72.500	ENSPMEG00000019623	apex1	90	72.500	Poecilia_mexicana
ENSACAG00000008099	APEX1	88	72.500	ENSPREG00000014298	apex1	90	72.500	Poecilia_reticulata
ENSACAG00000008099	APEX1	100	69.565	ENSPPYG00000005565	APEX1	100	69.565	Pongo_abelii
ENSACAG00000008099	APEX1	100	68.323	ENSPCAG00000010376	APEX1	100	68.323	Procavia_capensis
ENSACAG00000008099	APEX1	100	70.497	ENSPCOG00000021564	APEX1	100	70.497	Propithecus_coquereli
ENSACAG00000008099	APEX1	100	70.988	ENSPVAG00000010736	APEX1	100	68.125	Pteropus_vampyrus
ENSACAG00000008099	APEX1	87	74.909	ENSPNYG00000023940	apex1	99	70.159	Pundamilia_nyererei
ENSACAG00000008099	APEX1	91	69.966	ENSPNAG00000020897	apex1	85	75.099	Pygocentrus_nattereri
ENSACAG00000008099	APEX1	100	69.782	ENSRNOG00000009663	Apex1	100	69.782	Rattus_norvegicus
ENSACAG00000008099	APEX1	100	69.876	ENSRBIG00000038325	APEX1	99	69.876	Rhinopithecus_bieti
ENSACAG00000008099	APEX1	100	58.750	ENSSBOG00000031372	-	91	62.857	Saimiri_boliviensis_boliviensis
ENSACAG00000008099	APEX1	100	70.186	ENSSBOG00000018921	-	100	70.186	Saimiri_boliviensis_boliviensis
ENSACAG00000008099	APEX1	100	66.667	ENSSHAG00000013524	APEX1	100	66.667	Sarcophilus_harrisii
ENSACAG00000008099	APEX1	100	68.239	ENSSFOG00015001948	apex1	100	67.593	Scleropages_formosus
ENSACAG00000008099	APEX1	87	73.285	ENSSMAG00000013348	apex1	99	68.889	Scophthalmus_maximus
ENSACAG00000008099	APEX1	99	66.984	ENSSDUG00000016377	apex1	99	66.981	Seriola_dumerili
ENSACAG00000008099	APEX1	99	66.984	ENSSLDG00000023005	apex1	99	66.981	Seriola_lalandi_dorsalis
ENSACAG00000008099	APEX1	92	77.816	ENSSPUG00000000531	APEX1	94	79.928	Sphenodon_punctatus
ENSACAG00000008099	APEX1	99	67.302	ENSSPAG00000000458	apex1	99	67.302	Stegastes_partitus
ENSACAG00000008099	APEX1	92	42.761	ENSSSCG00000039705	-	92	43.972	Sus_scrofa
ENSACAG00000008099	APEX1	100	70.186	ENSSSCG00000040060	-	100	70.186	Sus_scrofa
ENSACAG00000008099	APEX1	74	59.149	ENSTGUG00000014378	APEX1	100	59.149	Taeniopygia_guttata
ENSACAG00000008099	APEX1	87	73.285	ENSTRUG00000004268	apex1	95	67.937	Takifugu_rubripes
ENSACAG00000008099	APEX1	99	68.254	ENSTNIG00000005778	apex1	99	68.254	Tetraodon_nigroviridis
ENSACAG00000008099	APEX1	100	67.702	ENSTBEG00000006405	APEX1	100	67.702	Tupaia_belangeri
ENSACAG00000008099	APEX1	74	73.617	ENSTTRG00000007860	APEX1	100	73.617	Tursiops_truncatus
ENSACAG00000008099	APEX1	100	70.186	ENSUAMG00000010457	APEX1	100	70.186	Ursus_americanus
ENSACAG00000008099	APEX1	100	70.186	ENSUMAG00000009178	APEX1	100	70.186	Ursus_maritimus
ENSACAG00000008099	APEX1	74	69.362	ENSVPAG00000005083	APEX1	100	69.362	Vicugna_pacos
ENSACAG00000008099	APEX1	100	69.876	ENSVVUG00000009010	APEX1	100	69.876	Vulpes_vulpes
ENSACAG00000008099	APEX1	100	70.347	ENSXETG00000024773	apex1	100	70.347	Xenopus_tropicalis
ENSACAG00000008099	APEX1	88	72.857	ENSXCOG00000015233	apex1	99	68.571	Xiphophorus_couchianus
ENSACAG00000008099	APEX1	88	72.857	ENSXMAG00000006195	apex1	99	68.571	Xiphophorus_maculatus