EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000008386 (Gene tree)
Gene ID: 100567699
Gene Symbol: -
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 61031 bases
Position: chr2:27775566-27836596
Accession: 100567699
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000008230	RRM_1	PF00076.22	7.1e-35	1	3
ENSACAP00000008230	RRM_1	PF00076.22	7.1e-35	2	3
ENSACAP00000008230	RRM_1	PF00076.22	7.1e-35	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000008407	-	4924	XM_008103088	ENSACAP00000008230	681 (aa)	XP_008101295	G1KHR1

Gene Model

Click here to download ENSACAG00000008386's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000008386's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000008386	-	80	46.000	ENSACAG00000008443	RAVER2	79	46.024

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000008386	-	94	59.084	ENSG00000161847	RAVER1	87	59.750	Homo_sapiens
ENSACAG00000008386	-	74	55.882	ENSAPOG00000017267	raver1	59	56.539	Acanthochromis_polyacanthus
ENSACAG00000008386	-	94	56.996	ENSAMEG00000011738	RAVER1	82	58.716	Ailuropoda_melanoleuca
ENSACAG00000008386	-	74	55.992	ENSAOCG00000005128	raver1	62	56.653	Amphiprion_ocellaris
ENSACAG00000008386	-	74	55.992	ENSAPEG00000010854	raver1	71	53.551	Amphiprion_percula
ENSACAG00000008386	-	89	51.057	ENSATEG00000021004	raver1	77	51.163	Anabas_testudineus
ENSACAG00000008386	-	96	58.083	ENSANAG00000028226	RAVER1	82	60.559	Aotus_nancymaae
ENSACAG00000008386	-	74	55.945	ENSACLG00000018492	raver1	67	55.800	Astatotilapia_calliptera
ENSACAG00000008386	-	75	54.649	ENSAMXG00000005132	raver1	82	49.287	Astyanax_mexicanus
ENSACAG00000008386	-	83	73.590	ENSBTAG00000015721	RAVER1	79	76.966	Bos_taurus
ENSACAG00000008386	-	94	58.515	ENSCJAG00000005671	RAVER1	82	60.714	Callithrix_jacchus
ENSACAG00000008386	-	94	60.763	ENSCAFG00000017861	RAVER1	81	63.040	Canis_familiaris
ENSACAG00000008386	-	94	60.763	ENSCAFG00020024449	RAVER1	83	63.040	Canis_lupus_dingo
ENSACAG00000008386	-	95	58.187	ENSCHIG00000006718	RAVER1	87	80.645	Capra_hircus
ENSACAG00000008386	-	59	89.655	ENSTSYG00000027107	RAVER1	82	70.504	Carlito_syrichta
ENSACAG00000008386	-	75	86.667	ENSCAPG00000002269	RAVER1	71	86.207	Cavia_aperea
ENSACAG00000008386	-	91	58.522	ENSCPOG00000001008	RAVER1	84	60.155	Cavia_porcellus
ENSACAG00000008386	-	97	57.103	ENSCCAG00000031723	RAVER1	84	59.451	Cebus_capucinus
ENSACAG00000008386	-	94	58.309	ENSCATG00000043863	RAVER1	82	60.964	Cercocebus_atys
ENSACAG00000008386	-	91	59.517	ENSCLAG00000009336	RAVER1	83	60.217	Chinchilla_lanigera
ENSACAG00000008386	-	94	58.309	ENSCSAG00000007317	RAVER1	70	60.809	Chlorocebus_sabaeus
ENSACAG00000008386	-	94	78.163	ENSCPBG00000005349	-	84	77.077	Chrysemys_picta_bellii
ENSACAG00000008386	-	91	59.581	ENSCANG00000008337	RAVER1	82	60.809	Colobus_angolensis_palliatus
ENSACAG00000008386	-	91	59.366	ENSCGRG00001013260	-	84	58.742	Cricetulus_griseus_chok1gshd
ENSACAG00000008386	-	91	59.366	ENSCGRG00000015138	-	84	58.742	Cricetulus_griseus_crigri
ENSACAG00000008386	-	91	49.442	ENSCSEG00000021092	raver1	78	50.000	Cynoglossus_semilaevis
ENSACAG00000008386	-	91	49.608	ENSCVAG00000013971	raver1	80	48.899	Cyprinodon_variegatus
ENSACAG00000008386	-	73	54.635	ENSDARG00000052617	raver1	65	69.378	Danio_rerio
ENSACAG00000008386	-	67	86.667	ENSDORG00000010106	-	74	86.667	Dipodomys_ordii
ENSACAG00000008386	-	52	83.333	ENSETEG00000008201	-	68	70.352	Echinops_telfairi
ENSACAG00000008386	-	54	34.762	ENSEBUG00000003030	RAVER1	52	34.230	Eptatretus_burgeri
ENSACAG00000008386	-	62	86.667	ENSEASG00005010544	-	70	89.655	Equus_asinus_asinus
ENSACAG00000008386	-	94	58.297	ENSECAG00000024966	RAVER1	82	60.247	Equus_caballus
ENSACAG00000008386	-	91	49.841	ENSELUG00000023287	raver1	80	49.919	Esox_lucius
ENSACAG00000008386	-	67	89.655	ENSFCAG00000009435	RAVER1	72	89.655	Felis_catus
ENSACAG00000008386	-	91	57.057	ENSFDAG00000015113	RAVER1	84	59.190	Fukomys_damarensis
ENSACAG00000008386	-	74	55.819	ENSGMOG00000003649	raver1	65	56.073	Gadus_morhua
ENSACAG00000008386	-	80	42.857	ENSGALG00000050608	-	55	43.097	Gallus_gallus
ENSACAG00000008386	-	91	48.509	ENSGAFG00000015944	raver1	78	49.178	Gambusia_affinis
ENSACAG00000008386	-	74	53.785	ENSGACG00000013818	raver1	63	54.747	Gasterosteus_aculeatus
ENSACAG00000008386	-	91	80.220	ENSGAGG00000011748	-	84	80.547	Gopherus_agassizii
ENSACAG00000008386	-	91	60.395	ENSGGOG00000006015	RAVER1	85	59.193	Gorilla_gorilla
ENSACAG00000008386	-	74	55.945	ENSHBUG00000021210	raver1	66	55.800	Haplochromis_burtoni
ENSACAG00000008386	-	91	59.299	ENSHGLG00000015460	RAVER1	84	60.031	Heterocephalus_glaber_female
ENSACAG00000008386	-	91	59.299	ENSHGLG00100000812	RAVER1	84	60.031	Heterocephalus_glaber_male
ENSACAG00000008386	-	77	55.198	ENSHCOG00000000449	raver1	65	55.620	Hippocampus_comes
ENSACAG00000008386	-	91	49.843	ENSIPUG00000013153	raver1	80	50.479	Ictalurus_punctatus
ENSACAG00000008386	-	94	58.686	ENSSTOG00000003241	RAVER1	84	60.676	Ictidomys_tridecemlineatus
ENSACAG00000008386	-	94	58.321	ENSJJAG00000018219	-	84	60.433	Jaculus_jaculus
ENSACAG00000008386	-	74	55.273	ENSKMAG00000017355	raver1	64	55.912	Kryptolebias_marmoratus
ENSACAG00000008386	-	91	49.842	ENSLBEG00000008268	raver1	81	50.739	Labrus_bergylta
ENSACAG00000008386	-	85	61.699	ENSLACG00000005809	-	89	62.360	Latimeria_chalumnae
ENSACAG00000008386	-	91	56.154	ENSLOCG00000007500	raver1	80	56.309	Lepisosteus_oculatus
ENSACAG00000008386	-	91	58.832	ENSLAFG00000003664	-	87	58.692	Loxodonta_africana
ENSACAG00000008386	-	94	58.309	ENSMFAG00000037977	RAVER1	82	60.964	Macaca_fascicularis
ENSACAG00000008386	-	94	58.309	ENSMMUG00000014897	RAVER1	87	57.014	Macaca_mulatta
ENSACAG00000008386	-	94	58.309	ENSMNEG00000028390	RAVER1	82	60.653	Macaca_nemestrina
ENSACAG00000008386	-	94	58.163	ENSMLEG00000041959	RAVER1	82	60.498	Mandrillus_leucophaeus
ENSACAG00000008386	-	84	52.226	ENSMAMG00000012059	raver1	78	50.820	Mastacembelus_armatus
ENSACAG00000008386	-	74	55.945	ENSMZEG00005019002	raver1	67	55.800	Maylandia_zebra
ENSACAG00000008386	-	91	59.970	ENSMAUG00000017948	-	84	60.062	Mesocricetus_auratus
ENSACAG00000008386	-	94	60.769	ENSMICG00000010326	RAVER1	83	62.500	Microcebus_murinus
ENSACAG00000008386	-	91	59.517	ENSMOCG00000015553	-	84	58.896	Microtus_ochrogaster
ENSACAG00000008386	-	90	49.442	ENSMMOG00000012093	raver1	80	47.799	Mola_mola
ENSACAG00000008386	-	91	66.878	ENSMODG00000005584	-	76	67.476	Monodelphis_domestica
ENSACAG00000008386	-	91	49.608	ENSMALG00000016569	raver1	80	49.600	Monopterus_albus
ENSACAG00000008386	-	94	58.480	MGP_CAROLIEiJ_G0031860	-	84	59.077	Mus_caroli
ENSACAG00000008386	-	91	59.309	ENSMUSG00000010205	Raver1	84	58.537	Mus_musculus
ENSACAG00000008386	-	91	58.296	MGP_PahariEiJ_G0014726	-	84	59.112	Mus_pahari
ENSACAG00000008386	-	91	59.159	MGP_SPRETEiJ_G0032984	-	84	58.384	Mus_spretus
ENSACAG00000008386	-	91	59.043	ENSMPUG00000006712	RAVER1	82	60.310	Mustela_putorius_furo
ENSACAG00000008386	-	91	61.120	ENSMLUG00000012328	RAVER1	83	62.720	Myotis_lucifugus
ENSACAG00000008386	-	91	58.621	ENSNGAG00000001260	-	86	60.521	Nannospalax_galili
ENSACAG00000008386	-	74	46.979	ENSNBRG00000010139	raver1	63	48.600	Neolamprologus_brichardi
ENSACAG00000008386	-	94	58.309	ENSNLEG00000012181	RAVER1	85	59.342	Nomascus_leucogenys
ENSACAG00000008386	-	85	62.439	ENSMEUG00000003281	-	88	62.439	Notamacropus_eugenii
ENSACAG00000008386	-	70	86.207	ENSODEG00000016260	RAVER1	86	86.207	Octodon_degus
ENSACAG00000008386	-	77	54.004	ENSONIG00000001559	raver1	67	71.981	Oreochromis_niloticus
ENSACAG00000008386	-	94	56.573	ENSOCUG00000020918	RAVER1	83	55.608	Oryctolagus_cuniculus
ENSACAG00000008386	-	94	47.706	ENSORLG00000005458	raver1	52	64.615	Oryzias_latipes
ENSACAG00000008386	-	94	48.260	ENSORLG00020004392	raver1	82	48.457	Oryzias_latipes_hni
ENSACAG00000008386	-	94	47.859	ENSORLG00015017222	raver1	82	48.050	Oryzias_latipes_hsok
ENSACAG00000008386	-	94	48.777	ENSOMEG00000023956	raver1	79	48.986	Oryzias_melastigma
ENSACAG00000008386	-	99	57.222	ENSOGAG00000011071	RAVER1	85	59.199	Otolemur_garnettii
ENSACAG00000008386	-	80	61.651	ENSOARG00000015886	RAVER1	78	57.143	Ovis_aries
ENSACAG00000008386	-	91	60.395	ENSPPAG00000002611	RAVER1	85	59.492	Pan_paniscus
ENSACAG00000008386	-	67	89.655	ENSPPRG00000009912	RAVER1	72	89.655	Panthera_pardus
ENSACAG00000008386	-	91	60.395	ENSPTRG00000010466	RAVER1	85	59.492	Pan_troglodytes
ENSACAG00000008386	-	94	58.309	ENSPANG00000004122	RAVER1	82	60.964	Papio_anubis
ENSACAG00000008386	-	91	59.427	ENSPEMG00000016411	-	84	59.049	Peromyscus_maniculatus_bairdii
ENSACAG00000008386	-	91	65.367	ENSPCIG00000018695	-	83	66.561	Phascolarctos_cinereus
ENSACAG00000008386	-	75	54.237	ENSPFOG00000007016	raver1	63	56.313	Poecilia_formosa
ENSACAG00000008386	-	79	54.495	ENSPLAG00000020793	raver1	69	55.642	Poecilia_latipinna
ENSACAG00000008386	-	73	56.487	ENSPMEG00000011220	raver1	61	58.537	Poecilia_mexicana
ENSACAG00000008386	-	77	54.459	ENSPREG00000006864	raver1	71	54.864	Poecilia_reticulata
ENSACAG00000008386	-	94	57.941	ENSPPYG00000010514	RAVER1	73	58.647	Pongo_abelii
ENSACAG00000008386	-	94	58.235	ENSPCOG00000026605	RAVER1	82	60.217	Propithecus_coquereli
ENSACAG00000008386	-	91	58.522	ENSPVAG00000003689	RAVER1	83	61.033	Pteropus_vampyrus
ENSACAG00000008386	-	68	56.197	ENSPNYG00000013284	raver1	62	58.242	Pundamilia_nyererei
ENSACAG00000008386	-	91	50.546	ENSPNAG00000015476	raver1	80	51.669	Pygocentrus_nattereri
ENSACAG00000008386	-	91	59.248	ENSRNOG00000020710	Raver1	84	59.385	Rattus_norvegicus
ENSACAG00000008386	-	94	60.363	ENSRBIG00000034702	RAVER1	84	61.256	Rhinopithecus_bieti
ENSACAG00000008386	-	91	62.208	ENSRROG00000031186	RAVER1	84	61.256	Rhinopithecus_roxellana
ENSACAG00000008386	-	96	60.060	ENSSBOG00000023423	RAVER1	81	61.920	Saimiri_boliviensis_boliviensis
ENSACAG00000008386	-	85	66.554	ENSSHAG00000008181	-	79	66.892	Sarcophilus_harrisii
ENSACAG00000008386	-	77	53.774	ENSSMAG00000004546	raver1	78	50.164	Scophthalmus_maximus
ENSACAG00000008386	-	74	56.582	ENSSDUG00000021063	raver1	84	49.445	Seriola_dumerili
ENSACAG00000008386	-	74	56.582	ENSSLDG00000014505	raver1	78	51.316	Seriola_lalandi_dorsalis
ENSACAG00000008386	-	78	53.645	ENSSPAG00000000688	raver1	78	50.493	Stegastes_partitus
ENSACAG00000008386	-	94	61.256	ENSSSCG00000013650	-	86	61.728	Sus_scrofa
ENSACAG00000008386	-	90	49.191	ENSTRUG00000025641	raver1	78	49.421	Takifugu_rubripes
ENSACAG00000008386	-	94	57.801	ENSTTRG00000009552	RAVER1	83	59.443	Tursiops_truncatus
ENSACAG00000008386	-	94	58.321	ENSUAMG00000020385	RAVER1	82	60.092	Ursus_americanus
ENSACAG00000008386	-	94	60.698	ENSVVUG00000028976	RAVER1	81	63.040	Vulpes_vulpes
ENSACAG00000008386	-	90	56.522	ENSXETG00000011622	raver1	82	55.882	Xenopus_tropicalis
ENSACAG00000008386	-	91	48.819	ENSXCOG00000016368	raver1	79	49.035	Xiphophorus_couchianus
ENSACAG00000008386	-	91	48.976	ENSXMAG00000000217	raver1	79	49.196	Xiphophorus_maculatus