EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000008936 (Gene tree)
Gene ID: -
Gene Symbol: TREX1
Alias: AGS1|DRN3
Full Name: three prime repair exonuclease 1
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 738 bases
Position: chr2:155923062-155923799
Accession: 100561159
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000008735	RNase_T	PF00929.24	8.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000008923	TREX1-201	720	XM_008105169	ENSACAP00000008735	240 (aa)	XP_008103376	G1KIA5

Gene Model

Click here to download ENSACAG00000008936's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000008936's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000008936	TREX1	94	46.460	ENSACAG00000012912	TREX2	94	46.460

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000008936	TREX1	93	44.843	ENSAMEG00000008933	TREX2	79	44.843	Ailuropoda_melanoleuca
ENSACAG00000008936	TREX1	97	43.966	ENSCAFG00000019185	TREX2	81	43.966	Canis_familiaris
ENSACAG00000008936	TREX1	94	44.444	ENSCAFG00020023190	TREX2	70	44.444	Canis_lupus_dingo
ENSACAG00000008936	TREX1	93	46.188	ENSCAPG00000004768	TREX2	82	46.188	Cavia_aperea
ENSACAG00000008936	TREX1	93	46.188	ENSCPOG00000025702	TREX2	93	46.188	Cavia_porcellus
ENSACAG00000008936	TREX1	97	45.690	ENSCLAG00000002698	TREX2	96	45.690	Chinchilla_lanigera
ENSACAG00000008936	TREX1	93	43.304	ENSCPBG00000008273	TREX2	79	43.304	Chrysemys_picta_bellii
ENSACAG00000008936	TREX1	93	46.188	ENSCGRG00001012110	Trex2	93	46.188	Cricetulus_griseus_chok1gshd
ENSACAG00000008936	TREX1	94	46.696	ENSDORG00000016464	Trex1	73	46.696	Dipodomys_ordii
ENSACAG00000008936	TREX1	93	38.158	ENSEBUG00000006412	TREX1	86	38.158	Eptatretus_burgeri
ENSACAG00000008936	TREX1	93	44.395	ENSEASG00005019558	TREX2	80	44.395	Equus_asinus_asinus
ENSACAG00000008936	TREX1	93	44.843	ENSECAG00000016012	TREX2	80	44.843	Equus_caballus
ENSACAG00000008936	TREX1	95	43.421	ENSFCAG00000018938	TREX2	95	43.421	Felis_catus
ENSACAG00000008936	TREX1	93	47.534	ENSFDAG00000014463	TREX2	93	47.534	Fukomys_damarensis
ENSACAG00000008936	TREX1	93	46.637	ENSHGLG00000008010	TREX2	93	46.637	Heterocephalus_glaber_female
ENSACAG00000008936	TREX1	93	46.637	ENSHGLG00100011918	TREX2	93	46.637	Heterocephalus_glaber_male
ENSACAG00000008936	TREX1	95	45.614	ENSSTOG00000027213	TREX2	94	45.614	Ictidomys_tridecemlineatus
ENSACAG00000008936	TREX1	93	46.188	ENSJJAG00000012484	Trex2	93	46.188	Jaculus_jaculus
ENSACAG00000008936	TREX1	97	44.397	ENSLACG00000000797	-	90	44.397	Latimeria_chalumnae
ENSACAG00000008936	TREX1	93	46.188	ENSMOCG00000001305	Trex2	93	46.188	Microtus_ochrogaster
ENSACAG00000008936	TREX1	95	42.544	ENSMODG00000022848	-	93	42.544	Monodelphis_domestica
ENSACAG00000008936	TREX1	95	42.982	ENSMODG00000025322	-	93	42.982	Monodelphis_domestica
ENSACAG00000008936	TREX1	93	45.740	MGP_CAROLIEiJ_G0033149	Trex2	93	45.740	Mus_caroli
ENSACAG00000008936	TREX1	93	45.740	ENSMUSG00000031372	Trex2	93	45.740	Mus_musculus
ENSACAG00000008936	TREX1	93	45.740	MGP_PahariEiJ_G0031692	Trex2	93	45.740	Mus_pahari
ENSACAG00000008936	TREX1	93	45.740	MGP_SPRETEiJ_G0034304	Trex2	93	45.740	Mus_spretus
ENSACAG00000008936	TREX1	93	43.498	ENSMPUG00000019552	TREX2	93	43.498	Mustela_putorius_furo
ENSACAG00000008936	TREX1	96	45.064	ENSMLUG00000027143	TREX2	97	45.064	Myotis_lucifugus
ENSACAG00000008936	TREX1	93	42.793	ENSMEUG00000016646	TREX2	97	42.793	Notamacropus_eugenii
ENSACAG00000008936	TREX1	93	45.291	ENSODEG00000019142	TREX2	85	45.291	Octodon_degus
ENSACAG00000008936	TREX1	98	45.726	ENSOANG00000000686	TREX2	98	45.726	Ornithorhynchus_anatinus
ENSACAG00000008936	TREX1	93	45.291	ENSOGAG00000033175	TREX2	86	45.291	Otolemur_garnettii
ENSACAG00000008936	TREX1	93	44.196	ENSPPRG00000017457	TREX2	93	44.196	Panthera_pardus
ENSACAG00000008936	TREX1	89	38.318	ENSPSIG00000006116	TREX2	87	38.318	Pelodiscus_sinensis
ENSACAG00000008936	TREX1	93	45.291	ENSPEMG00000004918	Trex2	93	45.291	Peromyscus_maniculatus_bairdii
ENSACAG00000008936	TREX1	90	43.779	ENSPCIG00000009700	TREX2	90	43.779	Phascolarctos_cinereus
ENSACAG00000008936	TREX1	95	45.415	ENSPCAG00000005411	TREX2	87	45.415	Procavia_capensis
ENSACAG00000008936	TREX1	93	45.740	ENSPVAG00000001122	TREX2	80	45.740	Pteropus_vampyrus
ENSACAG00000008936	TREX1	93	45.740	ENSRNOG00000056983	Trex2	93	45.740	Rattus_norvegicus
ENSACAG00000008936	TREX1	95	43.421	ENSSHAG00000004059	TREX2	94	43.421	Sarcophilus_harrisii
ENSACAG00000008936	TREX1	95	42.105	ENSSPUG00000012477	-	92	42.174	Sphenodon_punctatus
ENSACAG00000008936	TREX1	95	39.574	ENSSPUG00000015575	-	95	39.574	Sphenodon_punctatus
ENSACAG00000008936	TREX1	95	42.105	ENSSPUG00000012467	-	92	42.174	Sphenodon_punctatus
ENSACAG00000008936	TREX1	95	42.105	ENSSPUG00000012485	-	92	42.174	Sphenodon_punctatus
ENSACAG00000008936	TREX1	96	42.174	ENSSPUG00000012496	-	91	42.174	Sphenodon_punctatus
ENSACAG00000008936	TREX1	97	44.397	ENSUAMG00000027544	TREX2	84	44.397	Ursus_americanus
ENSACAG00000008936	TREX1	97	43.966	ENSVVUG00000029714	TREX2	85	43.966	Vulpes_vulpes