EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000009162 (Gene tree)
Gene ID: 100551781
Gene Symbol: -
Alias: -
Full Name: protein SMG5-like
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 15400 bases
Position: chrGL344815.1:308-15707
Accession: 100551781
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000008952	EST1_DNA_bind	PF10373.9	2.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000009144	-	2740	XM_008124861	ENSACAP00000008952	484 (aa)	XP_008123068	H9GEV3

Gene Model

Click here to download ENSACAG00000009162's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000009162's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000009162	-	88	69.555	ENSCAPG00000003631	SMG5	55	65.574	Cavia_aperea
ENSACAG00000009162	-	99	79.208	ENSCPBG00000025848	SMG5	51	77.579	Chrysemys_picta_bellii
ENSACAG00000009162	-	81	60.000	ENSGACG00000013142	smg5	50	53.321	Gasterosteus_aculeatus
ENSACAG00000009162	-	93	71.903	ENSHGLG00100015948	SMG5	51	68.930	Heterocephalus_glaber_male
ENSACAG00000009162	-	97	56.967	ENSMZEG00005016543	smg5	74	57.172	Maylandia_zebra
ENSACAG00000009162	-	94	75.165	ENSMODG00000016901	SMG5	52	71.546	Monodelphis_domestica
ENSACAG00000009162	-	93	66.147	ENSSARG00000012484	SMG5	51	63.768	Sorex_araneus
ENSACAG00000009162	-	99	77.075	ENSSPUG00000002260	SMG5	53	75.296	Sphenodon_punctatus
ENSACAG00000009162	-	97	67.442	ENSXETG00000033791	SMG5	59	67.442	Xenopus_tropicalis