EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000009245 (Gene tree)
Gene ID: 100567372
Gene Symbol: CPSF2
Alias: CPSF100|KIAA1367
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 15893 bases
Position: chr1:11624081-11639973
Accession: 100567372
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000009083	Beta-Casp	PF10996.8	7.7e-21	1	1
ENSACAP00000009083	Lactamase_B	PF00753.27	2.1e-06	1	1
ENSACAP00000009083	RMMBL	PF07521.12	4.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000009276	CPSF2-201	2387	XM_008112492	ENSACAP00000009083	783 (aa)	XP_008110699	G1KIP5

Gene Model

Click here to download ENSACAG00000009245's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000009245's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000009245	CPSF2	100	95.275	ENSG00000165934	CPSF2	100	96.250	Homo_sapiens
ENSACAG00000009245	CPSF2	100	84.918	ENSAPOG00000001242	cpsf2	100	84.918	Acanthochromis_polyacanthus
ENSACAG00000009245	CPSF2	100	85.190	ENSACIG00000009331	cpsf2	100	85.190	Amphilophus_citrinellus
ENSACAG00000009245	CPSF2	100	84.918	ENSAOCG00000014095	cpsf2	100	84.918	Amphiprion_ocellaris
ENSACAG00000009245	CPSF2	100	84.918	ENSAPEG00000009158	cpsf2	100	84.918	Amphiprion_percula
ENSACAG00000009245	CPSF2	96	84.868	ENSATEG00000017644	cpsf2	100	82.638	Anabas_testudineus
ENSACAG00000009245	CPSF2	100	95.541	ENSAPLG00000006330	CPSF2	100	95.541	Anas_platyrhynchos
ENSACAG00000009245	CPSF2	100	95.147	ENSANAG00000022915	CPSF2	100	95.147	Aotus_nancymaae
ENSACAG00000009245	CPSF2	100	85.896	ENSAMXG00000018696	cpsf2	100	85.896	Astyanax_mexicanus
ENSACAG00000009245	CPSF2	100	95.402	ENSBTAG00000010227	CPSF2	100	95.402	Bos_taurus
ENSACAG00000009245	CPSF2	100	41.371	WBGene00017313	cpsf-2	100	41.322	Caenorhabditis_elegans
ENSACAG00000009245	CPSF2	100	95.147	ENSCJAG00000018069	CPSF2	100	95.147	Callithrix_jacchus
ENSACAG00000009245	CPSF2	100	95.019	ENSCAFG00000010909	CPSF2	100	95.019	Canis_familiaris
ENSACAG00000009245	CPSF2	100	95.019	ENSCAFG00020020670	CPSF2	100	95.019	Canis_lupus_dingo
ENSACAG00000009245	CPSF2	100	95.402	ENSCHIG00000023848	CPSF2	100	95.402	Capra_hircus
ENSACAG00000009245	CPSF2	100	95.019	ENSTSYG00000009036	CPSF2	100	95.019	Carlito_syrichta
ENSACAG00000009245	CPSF2	100	95.147	ENSCPOG00000010899	CPSF2	100	95.147	Cavia_porcellus
ENSACAG00000009245	CPSF2	100	95.147	ENSCCAG00000028088	CPSF2	100	95.147	Cebus_capucinus
ENSACAG00000009245	CPSF2	100	95.147	ENSCATG00000030132	CPSF2	100	95.147	Cercocebus_atys
ENSACAG00000009245	CPSF2	100	95.019	ENSCLAG00000012404	CPSF2	100	95.019	Chinchilla_lanigera
ENSACAG00000009245	CPSF2	100	95.147	ENSCSAG00000011300	CPSF2	100	95.147	Chlorocebus_sabaeus
ENSACAG00000009245	CPSF2	100	88.889	ENSCHOG00000012904	CPSF2	100	88.889	Choloepus_hoffmanni
ENSACAG00000009245	CPSF2	100	95.658	ENSCPBG00000008766	CPSF2	97	95.658	Chrysemys_picta_bellii
ENSACAG00000009245	CPSF2	100	54.750	ENSCING00000007881	-	100	54.375	Ciona_intestinalis
ENSACAG00000009245	CPSF2	94	94.952	ENSCANG00000041651	CPSF2	100	94.952	Colobus_angolensis_palliatus
ENSACAG00000009245	CPSF2	100	95.275	ENSCGRG00001006901	Cpsf2	100	95.275	Cricetulus_griseus_chok1gshd
ENSACAG00000009245	CPSF2	100	95.275	ENSCGRG00000012416	Cpsf2	100	95.275	Cricetulus_griseus_crigri
ENSACAG00000009245	CPSF2	100	83.397	ENSCSEG00000004116	cpsf2	100	83.397	Cynoglossus_semilaevis
ENSACAG00000009245	CPSF2	100	84.918	ENSCVAG00000000095	cpsf2	100	85.044	Cyprinodon_variegatus
ENSACAG00000009245	CPSF2	100	85.570	ENSDARG00000028971	cpsf2	100	85.570	Danio_rerio
ENSACAG00000009245	CPSF2	100	95.147	ENSDNOG00000042757	CPSF2	100	95.147	Dasypus_novemcinctus
ENSACAG00000009245	CPSF2	100	94.891	ENSDORG00000013709	Cpsf2	100	94.891	Dipodomys_ordii
ENSACAG00000009245	CPSF2	100	53.300	FBgn0027873	Cpsf100	100	53.059	Drosophila_melanogaster
ENSACAG00000009245	CPSF2	100	86.352	ENSETEG00000012123	CPSF2	100	86.352	Echinops_telfairi
ENSACAG00000009245	CPSF2	52	75.735	ENSEBUG00000012098	cpsf2	93	75.735	Eptatretus_burgeri
ENSACAG00000009245	CPSF2	91	96.587	ENSEASG00005021193	CPSF2	100	96.587	Equus_asinus_asinus
ENSACAG00000009245	CPSF2	100	95.019	ENSECAG00000023935	CPSF2	100	95.019	Equus_caballus
ENSACAG00000009245	CPSF2	100	84.316	ENSELUG00000008442	cpsf2	100	84.316	Esox_lucius
ENSACAG00000009245	CPSF2	100	95.019	ENSFCAG00000007886	CPSF2	100	95.019	Felis_catus
ENSACAG00000009245	CPSF2	100	95.913	ENSFALG00000002412	CPSF2	100	95.913	Ficedula_albicollis
ENSACAG00000009245	CPSF2	100	95.019	ENSFDAG00000006327	CPSF2	100	95.019	Fukomys_damarensis
ENSACAG00000009245	CPSF2	96	84.444	ENSFHEG00000015465	cpsf2	98	84.837	Fundulus_heteroclitus
ENSACAG00000009245	CPSF2	100	82.850	ENSGMOG00000008761	cpsf2	100	82.850	Gadus_morhua
ENSACAG00000009245	CPSF2	100	95.019	ENSGALG00000010783	CPSF2	100	95.658	Gallus_gallus
ENSACAG00000009245	CPSF2	100	85.044	ENSGAFG00000001407	cpsf2	100	85.044	Gambusia_affinis
ENSACAG00000009245	CPSF2	100	84.284	ENSGACG00000008418	cpsf2	100	84.284	Gasterosteus_aculeatus
ENSACAG00000009245	CPSF2	100	95.785	ENSGAGG00000008287	CPSF2	100	95.785	Gopherus_agassizii
ENSACAG00000009245	CPSF2	100	95.275	ENSGGOG00000011799	CPSF2	100	95.275	Gorilla_gorilla
ENSACAG00000009245	CPSF2	100	84.664	ENSHBUG00000023466	cpsf2	100	84.664	Haplochromis_burtoni
ENSACAG00000009245	CPSF2	100	94.891	ENSHGLG00000018311	CPSF2	100	94.891	Heterocephalus_glaber_female
ENSACAG00000009245	CPSF2	100	94.891	ENSHGLG00100016460	CPSF2	100	94.891	Heterocephalus_glaber_male
ENSACAG00000009245	CPSF2	100	84.537	ENSHCOG00000019527	cpsf2	98	84.537	Hippocampus_comes
ENSACAG00000009245	CPSF2	100	85.769	ENSIPUG00000020857	cpsf2	100	85.769	Ictalurus_punctatus
ENSACAG00000009245	CPSF2	100	95.147	ENSSTOG00000009528	CPSF2	100	95.147	Ictidomys_tridecemlineatus
ENSACAG00000009245	CPSF2	100	95.147	ENSJJAG00000017925	Cpsf2	100	95.147	Jaculus_jaculus
ENSACAG00000009245	CPSF2	100	84.157	ENSKMAG00000019429	cpsf2	100	84.157	Kryptolebias_marmoratus
ENSACAG00000009245	CPSF2	95	83.690	ENSLBEG00000011585	cpsf2	100	83.824	Labrus_bergylta
ENSACAG00000009245	CPSF2	100	90.166	ENSLACG00000019024	CPSF2	100	90.805	Latimeria_chalumnae
ENSACAG00000009245	CPSF2	100	88.086	ENSLOCG00000014102	cpsf2	100	88.086	Lepisosteus_oculatus
ENSACAG00000009245	CPSF2	100	95.159	ENSLAFG00000004891	CPSF2	100	95.159	Loxodonta_africana
ENSACAG00000009245	CPSF2	100	95.147	ENSMFAG00000041212	CPSF2	100	95.147	Macaca_fascicularis
ENSACAG00000009245	CPSF2	100	95.147	ENSMMUG00000000699	CPSF2	100	95.147	Macaca_mulatta
ENSACAG00000009245	CPSF2	100	95.147	ENSMNEG00000031584	CPSF2	100	95.147	Macaca_nemestrina
ENSACAG00000009245	CPSF2	100	95.147	ENSMLEG00000029394	CPSF2	100	95.147	Mandrillus_leucophaeus
ENSACAG00000009245	CPSF2	100	84.664	ENSMAMG00000004235	cpsf2	100	84.664	Mastacembelus_armatus
ENSACAG00000009245	CPSF2	100	84.791	ENSMZEG00005001769	cpsf2	100	84.791	Maylandia_zebra
ENSACAG00000009245	CPSF2	100	94.770	ENSMGAG00000013122	CPSF2	100	95.408	Meleagris_gallopavo
ENSACAG00000009245	CPSF2	100	95.275	ENSMAUG00000015160	Cpsf2	100	95.275	Mesocricetus_auratus
ENSACAG00000009245	CPSF2	100	95.019	ENSMICG00000016441	CPSF2	100	95.019	Microcebus_murinus
ENSACAG00000009245	CPSF2	100	95.019	ENSMOCG00000015372	Cpsf2	100	95.019	Microtus_ochrogaster
ENSACAG00000009245	CPSF2	100	79.848	ENSMMOG00000015590	cpsf2	100	79.848	Mola_mola
ENSACAG00000009245	CPSF2	100	95.402	ENSMODG00000002042	CPSF2	100	95.402	Monodelphis_domestica
ENSACAG00000009245	CPSF2	100	82.383	ENSMALG00000022275	cpsf2	100	82.383	Monopterus_albus
ENSACAG00000009245	CPSF2	100	94.508	ENSMUSG00000041781	Cpsf2	100	94.508	Mus_musculus
ENSACAG00000009245	CPSF2	100	94.636	MGP_PahariEiJ_G0029791	Cpsf2	100	94.636	Mus_pahari
ENSACAG00000009245	CPSF2	100	94.508	MGP_SPRETEiJ_G0018877	Cpsf2	100	94.508	Mus_spretus
ENSACAG00000009245	CPSF2	100	95.275	ENSMPUG00000007617	CPSF2	98	95.275	Mustela_putorius_furo
ENSACAG00000009245	CPSF2	100	94.891	ENSMLUG00000005570	CPSF2	100	94.891	Myotis_lucifugus
ENSACAG00000009245	CPSF2	100	95.019	ENSNGAG00000020312	Cpsf2	100	95.019	Nannospalax_galili
ENSACAG00000009245	CPSF2	100	85.171	ENSNBRG00000022402	cpsf2	100	85.171	Neolamprologus_brichardi
ENSACAG00000009245	CPSF2	100	94.636	ENSNLEG00000017132	CPSF2	100	94.636	Nomascus_leucogenys
ENSACAG00000009245	CPSF2	91	99.353	ENSMEUG00000008138	CPSF2	91	99.353	Notamacropus_eugenii
ENSACAG00000009245	CPSF2	87	96.000	ENSOPRG00000008484	-	93	96.000	Ochotona_princeps
ENSACAG00000009245	CPSF2	100	94.764	ENSODEG00000008682	CPSF2	100	94.764	Octodon_degus
ENSACAG00000009245	CPSF2	100	85.551	ENSONIG00000005901	cpsf2	100	85.551	Oreochromis_niloticus
ENSACAG00000009245	CPSF2	100	95.275	ENSOANG00000003822	CPSF2	100	95.275	Ornithorhynchus_anatinus
ENSACAG00000009245	CPSF2	100	95.147	ENSOCUG00000005713	CPSF2	100	95.147	Oryctolagus_cuniculus
ENSACAG00000009245	CPSF2	100	79.341	ENSORLG00000011628	cpsf2	100	79.341	Oryzias_latipes
ENSACAG00000009245	CPSF2	100	84.157	ENSORLG00020016980	cpsf2	100	84.157	Oryzias_latipes_hni
ENSACAG00000009245	CPSF2	100	84.157	ENSORLG00015011910	cpsf2	100	84.157	Oryzias_latipes_hsok
ENSACAG00000009245	CPSF2	100	84.030	ENSOMEG00000022876	cpsf2	100	84.030	Oryzias_melastigma
ENSACAG00000009245	CPSF2	100	92.357	ENSOARG00000012889	CPSF2	100	92.357	Ovis_aries
ENSACAG00000009245	CPSF2	100	95.275	ENSPPAG00000039666	CPSF2	100	95.275	Pan_paniscus
ENSACAG00000009245	CPSF2	99	95.013	ENSPPRG00000010869	CPSF2	100	95.013	Panthera_pardus
ENSACAG00000009245	CPSF2	100	95.019	ENSPTIG00000021202	CPSF2	100	95.019	Panthera_tigris_altaica
ENSACAG00000009245	CPSF2	100	95.275	ENSPTRG00000006651	CPSF2	100	95.275	Pan_troglodytes
ENSACAG00000009245	CPSF2	100	95.147	ENSPANG00000017417	CPSF2	100	95.147	Papio_anubis
ENSACAG00000009245	CPSF2	100	81.703	ENSPKIG00000021453	cpsf2	100	81.703	Paramormyrops_kingsleyae
ENSACAG00000009245	CPSF2	100	95.530	ENSPSIG00000006289	CPSF2	100	95.530	Pelodiscus_sinensis
ENSACAG00000009245	CPSF2	76	79.568	ENSPMGG00000002511	cpsf2	100	79.568	Periophthalmus_magnuspinnatus
ENSACAG00000009245	CPSF2	100	95.147	ENSPEMG00000007917	Cpsf2	100	95.147	Peromyscus_maniculatus_bairdii
ENSACAG00000009245	CPSF2	100	74.116	ENSPMAG00000006205	cpsf2	100	74.116	Petromyzon_marinus
ENSACAG00000009245	CPSF2	100	95.402	ENSPCIG00000011393	CPSF2	100	95.402	Phascolarctos_cinereus
ENSACAG00000009245	CPSF2	100	85.044	ENSPFOG00000018648	cpsf2	100	85.044	Poecilia_formosa
ENSACAG00000009245	CPSF2	100	85.044	ENSPLAG00000019199	cpsf2	99	85.044	Poecilia_latipinna
ENSACAG00000009245	CPSF2	96	85.263	ENSPMEG00000012100	cpsf2	100	84.626	Poecilia_mexicana
ENSACAG00000009245	CPSF2	100	85.044	ENSPREG00000008960	cpsf2	100	85.044	Poecilia_reticulata
ENSACAG00000009245	CPSF2	63	93.159	ENSPPYG00000029685	-	100	93.159	Pongo_abelii
ENSACAG00000009245	CPSF2	100	95.402	ENSPCAG00000012477	CPSF2	100	95.402	Procavia_capensis
ENSACAG00000009245	CPSF2	100	95.019	ENSPCOG00000026387	CPSF2	100	95.019	Propithecus_coquereli
ENSACAG00000009245	CPSF2	65	98.469	ENSPVAG00000004223	CPSF2	65	98.469	Pteropus_vampyrus
ENSACAG00000009245	CPSF2	100	84.810	ENSPNYG00000023356	cpsf2	100	84.810	Pundamilia_nyererei
ENSACAG00000009245	CPSF2	100	86.912	ENSPNAG00000001849	cpsf2	100	86.912	Pygocentrus_nattereri
ENSACAG00000009245	CPSF2	100	94.636	ENSRNOG00000005733	Cpsf2	100	94.636	Rattus_norvegicus
ENSACAG00000009245	CPSF2	100	95.147	ENSRBIG00000044792	CPSF2	100	95.147	Rhinopithecus_bieti
ENSACAG00000009245	CPSF2	100	95.147	ENSRROG00000034875	CPSF2	100	95.147	Rhinopithecus_roxellana
ENSACAG00000009245	CPSF2	100	95.147	ENSSBOG00000024571	CPSF2	100	95.147	Saimiri_boliviensis_boliviensis
ENSACAG00000009245	CPSF2	100	95.275	ENSSHAG00000010458	CPSF2	100	95.275	Sarcophilus_harrisii
ENSACAG00000009245	CPSF2	100	86.912	ENSSFOG00015002117	cpsf2	100	86.912	Scleropages_formosus
ENSACAG00000009245	CPSF2	100	83.904	ENSSMAG00000002001	cpsf2	100	83.904	Scophthalmus_maximus
ENSACAG00000009245	CPSF2	100	85.298	ENSSDUG00000004084	cpsf2	100	85.298	Seriola_dumerili
ENSACAG00000009245	CPSF2	100	84.791	ENSSLDG00000024330	cpsf2	100	84.791	Seriola_lalandi_dorsalis
ENSACAG00000009245	CPSF2	58	100.000	ENSSARG00000009784	-	63	100.000	Sorex_araneus
ENSACAG00000009245	CPSF2	100	95.785	ENSSPUG00000013485	CPSF2	100	95.785	Sphenodon_punctatus
ENSACAG00000009245	CPSF2	100	84.157	ENSSPAG00000013284	cpsf2	100	84.157	Stegastes_partitus
ENSACAG00000009245	CPSF2	100	95.019	ENSSSCG00000002447	CPSF2	100	95.019	Sus_scrofa
ENSACAG00000009245	CPSF2	100	96.041	ENSTGUG00000012571	-	100	96.041	Taeniopygia_guttata
ENSACAG00000009245	CPSF2	100	84.157	ENSTRUG00000003742	cpsf2	100	84.157	Takifugu_rubripes
ENSACAG00000009245	CPSF2	100	82.933	ENSTNIG00000012228	cpsf2	100	83.692	Tetraodon_nigroviridis
ENSACAG00000009245	CPSF2	91	93.333	ENSTBEG00000004530	CPSF2	94	93.333	Tupaia_belangeri
ENSACAG00000009245	CPSF2	88	97.917	ENSTTRG00000008697	CPSF2	88	97.917	Tursiops_truncatus
ENSACAG00000009245	CPSF2	100	95.147	ENSUAMG00000028071	CPSF2	100	95.147	Ursus_americanus
ENSACAG00000009245	CPSF2	100	95.147	ENSUMAG00000005029	CPSF2	100	95.147	Ursus_maritimus
ENSACAG00000009245	CPSF2	99	95.013	ENSVPAG00000003503	CPSF2	100	95.013	Vicugna_pacos
ENSACAG00000009245	CPSF2	100	95.019	ENSVVUG00000024642	CPSF2	100	95.019	Vulpes_vulpes
ENSACAG00000009245	CPSF2	100	92.209	ENSXETG00000010289	cpsf2	100	92.209	Xenopus_tropicalis
ENSACAG00000009245	CPSF2	100	85.044	ENSXCOG00000001764	cpsf2	100	85.044	Xiphophorus_couchianus
ENSACAG00000009245	CPSF2	100	85.171	ENSXMAG00000017048	cpsf2	100	85.171	Xiphophorus_maculatus