EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000009282 (Gene tree)
Gene ID: 100559675
Gene Symbol: TRUB1
Alias: PUS4
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 53419 bases
Position: chrGL343206.1:3674344-3727762
Accession: 100559675
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000009094	TruB_N	PF01509.18	3.5e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000009287	TRUB1-201	3965	XM_008114827	ENSACAP00000009094	276 (aa)	-	H9GF07

Gene Model

Click here to download ENSACAG00000009282's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000009282's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000009282	TRUB1	73	32.039	ENSACAG00000007331	TRUB2	62	32.039

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000009282	TRUB1	97	70.896	ENSG00000165832	TRUB1	77	70.896	Homo_sapiens
ENSACAG00000009282	TRUB1	88	68.033	ENSAPOG00000020565	trub1	89	67.755	Acanthochromis_polyacanthus
ENSACAG00000009282	TRUB1	97	70.480	ENSAMEG00000014931	TRUB1	77	70.480	Ailuropoda_melanoleuca
ENSACAG00000009282	TRUB1	96	59.023	ENSACIG00000003060	trub1	88	59.023	Amphilophus_citrinellus
ENSACAG00000009282	TRUB1	88	68.033	ENSAOCG00000017188	trub1	89	67.755	Amphiprion_ocellaris
ENSACAG00000009282	TRUB1	88	67.347	ENSAPEG00000015209	trub1	89	67.347	Amphiprion_percula
ENSACAG00000009282	TRUB1	87	67.769	ENSATEG00000023291	trub1	87	67.769	Anabas_testudineus
ENSACAG00000009282	TRUB1	97	72.761	ENSAPLG00000006808	TRUB1	96	72.761	Anas_platyrhynchos
ENSACAG00000009282	TRUB1	97	71.004	ENSANAG00000022870	TRUB1	77	71.004	Aotus_nancymaae
ENSACAG00000009282	TRUB1	88	66.939	ENSACLG00000000823	trub1	88	66.939	Astatotilapia_calliptera
ENSACAG00000009282	TRUB1	93	63.320	ENSAMXG00000015845	trub1	87	63.320	Astyanax_mexicanus
ENSACAG00000009282	TRUB1	97	71.375	ENSBTAG00000012955	TRUB1	76	71.375	Bos_taurus
ENSACAG00000009282	TRUB1	97	71.004	ENSCJAG00000047815	TRUB1	77	71.004	Callithrix_jacchus
ENSACAG00000009282	TRUB1	97	72.119	ENSCAFG00000011688	TRUB1	77	72.119	Canis_familiaris
ENSACAG00000009282	TRUB1	97	72.119	ENSCAFG00020013237	TRUB1	77	72.119	Canis_lupus_dingo
ENSACAG00000009282	TRUB1	97	71.375	ENSCHIG00000020884	TRUB1	81	71.375	Capra_hircus
ENSACAG00000009282	TRUB1	97	71.375	ENSTSYG00000000446	TRUB1	77	71.375	Carlito_syrichta
ENSACAG00000009282	TRUB1	85	60.593	ENSCAPG00000017088	TRUB1	92	60.593	Cavia_aperea
ENSACAG00000009282	TRUB1	68	68.085	ENSCPOG00000030129	-	73	68.085	Cavia_porcellus
ENSACAG00000009282	TRUB1	67	68.649	ENSCPOG00000040236	-	76	68.649	Cavia_porcellus
ENSACAG00000009282	TRUB1	97	71.004	ENSCCAG00000028842	TRUB1	77	71.004	Cebus_capucinus
ENSACAG00000009282	TRUB1	96	71.429	ENSCATG00000033431	TRUB1	76	71.429	Cercocebus_atys
ENSACAG00000009282	TRUB1	67	68.280	ENSCLAG00000008664	TRUB1	76	68.280	Chinchilla_lanigera
ENSACAG00000009282	TRUB1	97	71.004	ENSCSAG00000004891	TRUB1	77	71.004	Chlorocebus_sabaeus
ENSACAG00000009282	TRUB1	89	62.602	ENSCHOG00000011931	TRUB1	71	62.602	Choloepus_hoffmanni
ENSACAG00000009282	TRUB1	97	75.836	ENSCPBG00000003051	TRUB1	93	75.836	Chrysemys_picta_bellii
ENSACAG00000009282	TRUB1	97	71.004	ENSCANG00000029445	TRUB1	77	71.004	Colobus_angolensis_palliatus
ENSACAG00000009282	TRUB1	85	69.787	ENSCGRG00001016772	-	79	69.620	Cricetulus_griseus_chok1gshd
ENSACAG00000009282	TRUB1	94	62.452	ENSCGRG00001010322	-	73	62.362	Cricetulus_griseus_chok1gshd
ENSACAG00000009282	TRUB1	94	70.115	ENSCGRG00000010806	Trub1	83	70.111	Cricetulus_griseus_crigri
ENSACAG00000009282	TRUB1	91	64.143	ENSCSEG00000011261	trub1	85	62.595	Cynoglossus_semilaevis
ENSACAG00000009282	TRUB1	91	64.143	ENSCVAG00000008791	trub1	77	64.143	Cyprinodon_variegatus
ENSACAG00000009282	TRUB1	94	63.846	ENSDARG00000053805	trub1	90	63.846	Danio_rerio
ENSACAG00000009282	TRUB1	97	71.004	ENSDNOG00000001069	TRUB1	77	71.004	Dasypus_novemcinctus
ENSACAG00000009282	TRUB1	93	71.429	ENSDORG00000010431	Trub1	78	71.375	Dipodomys_ordii
ENSACAG00000009282	TRUB1	73	68.345	ENSETEG00000009183	TRUB1	57	68.345	Echinops_telfairi
ENSACAG00000009282	TRUB1	97	70.632	ENSEASG00005014739	TRUB1	77	70.632	Equus_asinus_asinus
ENSACAG00000009282	TRUB1	97	70.632	ENSECAG00000007177	TRUB1	77	70.632	Equus_caballus
ENSACAG00000009282	TRUB1	98	60.517	ENSEEUG00000013993	TRUB1	76	60.294	Erinaceus_europaeus
ENSACAG00000009282	TRUB1	88	65.306	ENSELUG00000000502	trub1	86	65.306	Esox_lucius
ENSACAG00000009282	TRUB1	99	71.429	ENSFCAG00000031927	TRUB1	78	71.429	Felis_catus
ENSACAG00000009282	TRUB1	86	75.527	ENSFALG00000002232	TRUB1	91	75.527	Ficedula_albicollis
ENSACAG00000009282	TRUB1	67	69.355	ENSFDAG00000008140	TRUB1	76	69.355	Fukomys_damarensis
ENSACAG00000009282	TRUB1	88	64.082	ENSFHEG00000004016	trub1	84	64.082	Fundulus_heteroclitus
ENSACAG00000009282	TRUB1	97	70.149	ENSGALG00000009091	TRUB1	94	73.659	Gallus_gallus
ENSACAG00000009282	TRUB1	88	62.857	ENSGAFG00000009193	trub1	86	62.857	Gambusia_affinis
ENSACAG00000009282	TRUB1	70	67.526	ENSGACG00000015387	trub1	95	67.526	Gasterosteus_aculeatus
ENSACAG00000009282	TRUB1	97	77.323	ENSGAGG00000009758	TRUB1	78	76.015	Gopherus_agassizii
ENSACAG00000009282	TRUB1	97	71.269	ENSGGOG00000004583	TRUB1	77	71.269	Gorilla_gorilla
ENSACAG00000009282	TRUB1	88	66.939	ENSHBUG00000016787	trub1	88	66.939	Haplochromis_burtoni
ENSACAG00000009282	TRUB1	98	66.790	ENSHGLG00000015314	TRUB1	78	66.790	Heterocephalus_glaber_female
ENSACAG00000009282	TRUB1	67	67.742	ENSHGLG00100009183	TRUB1	78	67.742	Heterocephalus_glaber_male
ENSACAG00000009282	TRUB1	88	67.347	ENSHCOG00000017877	trub1	89	67.347	Hippocampus_comes
ENSACAG00000009282	TRUB1	88	64.754	ENSIPUG00000017559	trub1	86	64.754	Ictalurus_punctatus
ENSACAG00000009282	TRUB1	97	70.632	ENSSTOG00000003641	TRUB1	80	70.632	Ictidomys_tridecemlineatus
ENSACAG00000009282	TRUB1	97	71.852	ENSJJAG00000011800	Trub1	79	71.852	Jaculus_jaculus
ENSACAG00000009282	TRUB1	88	65.714	ENSKMAG00000006232	trub1	88	65.714	Kryptolebias_marmoratus
ENSACAG00000009282	TRUB1	88	66.122	ENSLBEG00000026722	trub1	86	66.122	Labrus_bergylta
ENSACAG00000009282	TRUB1	96	68.679	ENSLACG00000014885	TRUB1	89	68.679	Latimeria_chalumnae
ENSACAG00000009282	TRUB1	96	66.288	ENSLOCG00000012979	trub1	90	66.288	Lepisosteus_oculatus
ENSACAG00000009282	TRUB1	92	71.765	ENSLAFG00000015452	TRUB1	77	69.888	Loxodonta_africana
ENSACAG00000009282	TRUB1	97	71.004	ENSMFAG00000031767	TRUB1	77	71.004	Macaca_fascicularis
ENSACAG00000009282	TRUB1	97	71.004	ENSMMUG00000001902	TRUB1	77	71.004	Macaca_mulatta
ENSACAG00000009282	TRUB1	97	66.914	ENSMNEG00000044646	TRUB1	76	66.914	Macaca_nemestrina
ENSACAG00000009282	TRUB1	97	71.004	ENSMLEG00000042655	TRUB1	77	71.004	Mandrillus_leucophaeus
ENSACAG00000009282	TRUB1	88	66.939	ENSMZEG00005024095	trub1	88	66.939	Maylandia_zebra
ENSACAG00000009282	TRUB1	97	70.522	ENSMGAG00000011135	TRUB1	92	70.522	Meleagris_gallopavo
ENSACAG00000009282	TRUB1	94	67.816	ENSMAUG00000011101	Trub1	80	67.897	Mesocricetus_auratus
ENSACAG00000009282	TRUB1	97	71.747	ENSMICG00000016324	TRUB1	77	71.747	Microcebus_murinus
ENSACAG00000009282	TRUB1	93	70.656	ENSMOCG00000017759	Trub1	81	70.632	Microtus_ochrogaster
ENSACAG00000009282	TRUB1	97	72.862	ENSMODG00000009676	TRUB1	77	72.563	Monodelphis_domestica
ENSACAG00000009282	TRUB1	96	69.057	MGP_CAROLIEiJ_G0023100	Trub1	81	68.727	Mus_caroli
ENSACAG00000009282	TRUB1	96	68.302	ENSMUSG00000025086	Trub1	81	68.000	Mus_musculus
ENSACAG00000009282	TRUB1	98	69.004	MGP_PahariEiJ_G0014588	Trub1	80	69.004	Mus_pahari
ENSACAG00000009282	TRUB1	96	68.679	MGP_SPRETEiJ_G0024021	Trub1	81	68.364	Mus_spretus
ENSACAG00000009282	TRUB1	97	71.747	ENSMPUG00000003556	TRUB1	77	71.747	Mustela_putorius_furo
ENSACAG00000009282	TRUB1	98	70.956	ENSMLUG00000017686	TRUB1	79	71.481	Myotis_lucifugus
ENSACAG00000009282	TRUB1	95	70.833	ENSNGAG00000018682	Trub1	76	70.833	Nannospalax_galili
ENSACAG00000009282	TRUB1	88	67.347	ENSNBRG00000023393	trub1	88	67.347	Neolamprologus_brichardi
ENSACAG00000009282	TRUB1	97	71.269	ENSNLEG00000016345	TRUB1	77	71.269	Nomascus_leucogenys
ENSACAG00000009282	TRUB1	72	71.642	ENSMEUG00000006603	TRUB1	77	71.292	Notamacropus_eugenii
ENSACAG00000009282	TRUB1	96	71.805	ENSOPRG00000009371	TRUB1	77	71.805	Ochotona_princeps
ENSACAG00000009282	TRUB1	96	69.173	ENSODEG00000010854	TRUB1	76	69.173	Octodon_degus
ENSACAG00000009282	TRUB1	91	67.063	ENSONIG00000007249	trub1	93	66.406	Oreochromis_niloticus
ENSACAG00000009282	TRUB1	98	67.159	ENSOANG00000001556	TRUB1	89	67.159	Ornithorhynchus_anatinus
ENSACAG00000009282	TRUB1	99	69.231	ENSOCUG00000009456	TRUB1	79	69.231	Oryctolagus_cuniculus
ENSACAG00000009282	TRUB1	87	65.975	ENSORLG00000029719	trub1	86	65.975	Oryzias_latipes
ENSACAG00000009282	TRUB1	87	65.975	ENSORLG00020016767	trub1	85	65.975	Oryzias_latipes_hni
ENSACAG00000009282	TRUB1	87	66.390	ENSORLG00015014728	trub1	86	66.390	Oryzias_latipes_hsok
ENSACAG00000009282	TRUB1	88	65.021	ENSOMEG00000014556	trub1	85	65.021	Oryzias_melastigma
ENSACAG00000009282	TRUB1	97	71.004	ENSOGAG00000015895	TRUB1	77	71.004	Otolemur_garnettii
ENSACAG00000009282	TRUB1	97	69.203	ENSOARG00000015591	TRUB1	78	69.203	Ovis_aries
ENSACAG00000009282	TRUB1	97	71.269	ENSPPAG00000043645	TRUB1	77	71.269	Pan_paniscus
ENSACAG00000009282	TRUB1	99	71.062	ENSPPRG00000007096	TRUB1	78	71.062	Panthera_pardus
ENSACAG00000009282	TRUB1	99	71.429	ENSPTIG00000006378	TRUB1	78	71.429	Panthera_tigris_altaica
ENSACAG00000009282	TRUB1	97	71.269	ENSPTRG00000002964	TRUB1	77	71.269	Pan_troglodytes
ENSACAG00000009282	TRUB1	97	71.004	ENSPANG00000020712	TRUB1	77	71.004	Papio_anubis
ENSACAG00000009282	TRUB1	61	70.060	ENSPKIG00000003852	trub1	72	70.060	Paramormyrops_kingsleyae
ENSACAG00000009282	TRUB1	97	75.836	ENSPSIG00000012877	TRUB1	93	75.836	Pelodiscus_sinensis
ENSACAG00000009282	TRUB1	88	64.228	ENSPMGG00000000075	trub1	88	64.228	Periophthalmus_magnuspinnatus
ENSACAG00000009282	TRUB1	98	69.742	ENSPEMG00000011156	Trub1	80	69.742	Peromyscus_maniculatus_bairdii
ENSACAG00000009282	TRUB1	97	72.862	ENSPCIG00000009729	TRUB1	73	74.532	Phascolarctos_cinereus
ENSACAG00000009282	TRUB1	88	64.082	ENSPFOG00000009950	trub1	90	64.082	Poecilia_formosa
ENSACAG00000009282	TRUB1	88	64.082	ENSPLAG00000013855	trub1	86	64.082	Poecilia_latipinna
ENSACAG00000009282	TRUB1	88	64.082	ENSPMEG00000009064	trub1	88	64.082	Poecilia_mexicana
ENSACAG00000009282	TRUB1	88	64.634	ENSPREG00000003343	trub1	88	64.634	Poecilia_reticulata
ENSACAG00000009282	TRUB1	97	70.896	ENSPPYG00000002676	TRUB1	77	70.896	Pongo_abelii
ENSACAG00000009282	TRUB1	97	63.433	ENSPCAG00000008427	TRUB1	76	63.433	Procavia_capensis
ENSACAG00000009282	TRUB1	97	67.286	ENSPCOG00000024360	TRUB1	76	67.286	Propithecus_coquereli
ENSACAG00000009282	TRUB1	74	71.707	ENSPVAG00000007575	TRUB1	78	71.707	Pteropus_vampyrus
ENSACAG00000009282	TRUB1	88	66.939	ENSPNYG00000018614	trub1	88	66.939	Pundamilia_nyererei
ENSACAG00000009282	TRUB1	97	55.805	ENSPNAG00000006881	trub1	87	55.805	Pygocentrus_nattereri
ENSACAG00000009282	TRUB1	98	68.635	ENSRNOG00000017321	Trub1	79	68.635	Rattus_norvegicus
ENSACAG00000009282	TRUB1	97	62.454	ENSRBIG00000033423	TRUB1	75	62.454	Rhinopithecus_bieti
ENSACAG00000009282	TRUB1	97	71.004	ENSRROG00000033902	TRUB1	77	71.004	Rhinopithecus_roxellana
ENSACAG00000009282	TRUB1	97	71.004	ENSSBOG00000024237	TRUB1	77	71.004	Saimiri_boliviensis_boliviensis
ENSACAG00000009282	TRUB1	91	71.146	ENSSHAG00000009346	TRUB1	83	71.146	Sarcophilus_harrisii
ENSACAG00000009282	TRUB1	90	66.800	ENSSFOG00015022124	trub1	85	66.800	Scleropages_formosus
ENSACAG00000009282	TRUB1	88	66.531	ENSSMAG00000001020	trub1	92	62.921	Scophthalmus_maximus
ENSACAG00000009282	TRUB1	86	67.364	ENSSDUG00000016414	trub1	88	66.531	Seriola_dumerili
ENSACAG00000009282	TRUB1	86	67.782	ENSSLDG00000015486	trub1	88	66.939	Seriola_lalandi_dorsalis
ENSACAG00000009282	TRUB1	97	75.373	ENSSPUG00000001642	TRUB1	92	75.373	Sphenodon_punctatus
ENSACAG00000009282	TRUB1	88	68.571	ENSSPAG00000001217	trub1	88	68.571	Stegastes_partitus
ENSACAG00000009282	TRUB1	97	70.522	ENSSSCG00000010653	TRUB1	78	70.522	Sus_scrofa
ENSACAG00000009282	TRUB1	96	75.188	ENSTGUG00000010971	TRUB1	99	74.007	Taeniopygia_guttata
ENSACAG00000009282	TRUB1	84	61.638	ENSTBEG00000002880	TRUB1	91	61.638	Tupaia_belangeri
ENSACAG00000009282	TRUB1	74	72.195	ENSTTRG00000005767	TRUB1	78	72.195	Tursiops_truncatus
ENSACAG00000009282	TRUB1	97	71.747	ENSUAMG00000024876	TRUB1	77	71.747	Ursus_americanus
ENSACAG00000009282	TRUB1	97	72.119	ENSUMAG00000002411	TRUB1	80	72.119	Ursus_maritimus
ENSACAG00000009282	TRUB1	97	72.119	ENSVPAG00000005507	TRUB1	77	72.119	Vicugna_pacos
ENSACAG00000009282	TRUB1	97	72.119	ENSVVUG00000010085	TRUB1	65	72.119	Vulpes_vulpes
ENSACAG00000009282	TRUB1	95	65.134	ENSXETG00000023828	trub1	95	65.134	Xenopus_tropicalis
ENSACAG00000009282	TRUB1	88	63.115	ENSXCOG00000017847	trub1	86	63.115	Xiphophorus_couchianus
ENSACAG00000009282	TRUB1	88	64.082	ENSXMAG00000014701	trub1	88	64.082	Xiphophorus_maculatus