EuRBPDB

Description
Ensembl ID
ENSACAG00000009415 (Gene tree)
Gene ID
100557842
Gene Symbol
SF3A1
Alias
PRPF21|Prp21|SAP114|SF3a120
Full Name
splicing factor 3a subunit 1
Gene Type
protein_coding
Species
Anolis_carolinensis
Status
putative
Strand
Minus strand
Length
6753 bases
Position
chrGL343417.1:117453-124205
Accession
100557842
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein ID
Domain
Pfam ID
E-value
Domain number
Total number
ENSACAP00000009268PRP21_like_PPF12230.89.3e-5311
ENSACAP00000009268SurpPF01805.203.8e-4612
ENSACAP00000009268SurpPF01805.203.8e-4622
Transcripts
Transcript ID
Name
Length
RefSeq ID
Protein ID
Length
RefSeq ID
UniportKB ID
ENSACAT00000009461SF3A1-2012427XM_003226835ENSACAP00000009268808 (aa)XP_003226883H9GF80
Gene Model
Pathways
Pathway ID
Pathway Name
Source
acs03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)
Orthologs
Ensembl ID
Gene Symbol
Coverage
Identiy
Ortholog
Gene Symbol
Coverage
Identiy
Species
ENSACAG00000009415SF3A110087.192ENSG00000099995SF3A110085.591Homo_sapiens
ENSACAG00000009415SF3A110082.346ENSAPOG00000020465sf3a110081.852Acanthochromis_polyacanthus
ENSACAG00000009415SF3A19788.310ENSAMEG00000007737SF3A110085.749Ailuropoda_melanoleuca
ENSACAG00000009415SF3A110081.852ENSACIG00000020672sf3a110081.605Amphilophus_citrinellus
ENSACAG00000009415SF3A110082.099ENSAOCG00000003060sf3a110081.481Amphiprion_ocellaris
ENSACAG00000009415SF3A110082.099ENSAPEG00000010735sf3a110081.852Amphiprion_percula
ENSACAG00000009415SF3A19783.014ENSATEG00000021201sf3a19981.266Anabas_testudineus
ENSACAG00000009415SF3A19689.535ENSAPLG00000009057SF3A19987.833Anas_platyrhynchos
ENSACAG00000009415SF3A110086.946ENSANAG00000032045SF3A110085.591Aotus_nancymaae
ENSACAG00000009415SF3A110081.931ENSACLG00000012622sf3a110081.807Astatotilapia_calliptera
ENSACAG00000009415SF3A19980.497ENSAMXG00000005382sf3a110081.118Astyanax_mexicanus
ENSACAG00000009415SF3A110087.315ENSBTAG00000003390SF3A110085.961Bos_taurus
ENSACAG00000009415SF3A17944.860WBGene00004188prp-219442.553Caenorhabditis_elegans
ENSACAG00000009415SF3A110087.069ENSCJAG00000010370SF3A110085.714Callithrix_jacchus
ENSACAG00000009415SF3A110087.069ENSCAFG00000012559SF3A110085.714Canis_familiaris
ENSACAG00000009415SF3A110087.069ENSCAFG00020000838SF3A110085.714Canis_lupus_dingo
ENSACAG00000009415SF3A110087.438ENSCHIG00000018642SF3A110086.084Capra_hircus
ENSACAG00000009415SF3A110087.069ENSTSYG00000004739SF3A110085.714Carlito_syrichta
ENSACAG00000009415SF3A19572.715ENSCAPG00000015414SF3A19872.324Cavia_aperea
ENSACAG00000009415SF3A110087.685ENSCPOG00000014589SF3A110085.961Cavia_porcellus
ENSACAG00000009415SF3A110086.946ENSCCAG00000032006SF3A110085.591Cebus_capucinus
ENSACAG00000009415SF3A110086.823ENSCATG00000029241SF3A110085.591Cercocebus_atys
ENSACAG00000009415SF3A110087.192ENSCLAG00000006508SF3A110085.961Chinchilla_lanigera
ENSACAG00000009415SF3A110086.823ENSCSAG00000009470SF3A110085.591Chlorocebus_sabaeus
ENSACAG00000009415SF3A15793.258ENSCHOG00000005201SF3A16893.578Choloepus_hoffmanni
ENSACAG00000009415SF3A110088.366ENSCPBG00000007595SF3A110087.624Chrysemys_picta_bellii
ENSACAG00000009415SF3A19550.704ENSCING00000008526-9750.501Ciona_intestinalis
ENSACAG00000009415SF3A19559.859ENSCSAVG00000005608-9164.912Ciona_savignyi
ENSACAG00000009415SF3A110086.823ENSCANG00000033564SF3A110085.591Colobus_angolensis_palliatus
ENSACAG00000009415SF3A110087.069ENSCGRG00001008933Sf3a110085.714Cricetulus_griseus_chok1gshd
ENSACAG00000009415SF3A110087.069ENSCGRG00000006127Sf3a110085.714Cricetulus_griseus_crigri
ENSACAG00000009415SF3A110079.383ENSCSEG00000010792sf3a110079.877Cynoglossus_semilaevis
ENSACAG00000009415SF3A110080.247ENSCVAG00000004560sf3a110079.506Cyprinodon_variegatus
ENSACAG00000009415SF3A110079.753ENSDARG00000041887sf3a110082.873Danio_rerio
ENSACAG00000009415SF3A19887.925ENSDNOG00000010629SF3A110085.258Dasypus_novemcinctus
ENSACAG00000009415SF3A110087.315ENSDORG00000005613Sf3a110085.591Dipodomys_ordii
ENSACAG00000009415SF3A18061.131FBgn0266917Sf3a18759.397Drosophila_melanogaster
ENSACAG00000009415SF3A18588.047ENSETEG00000017194SF3A110083.402Echinops_telfairi
ENSACAG00000009415SF3A19768.344ENSEBUG00000001285sf3a19667.643Eptatretus_burgeri
ENSACAG00000009415SF3A110087.562ENSEASG00005010254SF3A110086.207Equus_asinus_asinus
ENSACAG00000009415SF3A110087.562ENSECAG00000023962SF3A110086.207Equus_caballus
ENSACAG00000009415SF3A17491.803ENSEEUG00000003159SF3A18291.803Erinaceus_europaeus
ENSACAG00000009415SF3A110079.531ENSELUG00000022578sf3a110077.654Esox_lucius
ENSACAG00000009415SF3A110087.192ENSFCAG00000011932SF3A110085.837Felis_catus
ENSACAG00000009415SF3A19688.616ENSFALG00000006944SF3A110086.527Ficedula_albicollis
ENSACAG00000009415SF3A110087.069ENSFDAG00000009560SF3A110085.837Fukomys_damarensis
ENSACAG00000009415SF3A110080.864ENSFHEG00000010866sf3a110081.358Fundulus_heteroclitus
ENSACAG00000009415SF3A110078.713ENSGMOG00000016024sf3a110077.669Gadus_morhua
ENSACAG00000009415SF3A19689.521ENSGALG00000007937SF3A110087.145Gallus_gallus
ENSACAG00000009415SF3A110080.123ENSGAFG00000009111sf3a110080.370Gambusia_affinis
ENSACAG00000009415SF3A110080.074ENSGACG00000011893sf3a110079.332Gasterosteus_aculeatus
ENSACAG00000009415SF3A19687.742ENSGAGG00000000762SF3A19986.968Gopherus_agassizii
ENSACAG00000009415SF3A110087.192ENSGGOG00000012631SF3A110085.591Gorilla_gorilla
ENSACAG00000009415SF3A110082.178ENSHBUG00000015795sf3a110081.931Haplochromis_burtoni
ENSACAG00000009415SF3A110087.315ENSHGLG00000007907SF3A110085.961Heterocephalus_glaber_female
ENSACAG00000009415SF3A110087.315ENSHGLG00100013799SF3A110085.961Heterocephalus_glaber_male
ENSACAG00000009415SF3A110078.492ENSHCOG00000015423sf3a110077.627Hippocampus_comes
ENSACAG00000009415SF3A19779.721ENSIPUG00000002470sf3a19980.862Ictalurus_punctatus
ENSACAG00000009415SF3A110087.192ENSSTOG00000013892SF3A110085.837Ictidomys_tridecemlineatus
ENSACAG00000009415SF3A110087.085ENSJJAG00000022566Sf3a110085.732Jaculus_jaculus
ENSACAG00000009415SF3A110080.593ENSKMAG00000002400sf3a110080.617Kryptolebias_marmoratus
ENSACAG00000009415SF3A110080.717ENSLBEG00000022974sf3a110080.593Labrus_bergylta
ENSACAG00000009415SF3A110083.210ENSLACG00000003565SF3A110083.086Latimeria_chalumnae
ENSACAG00000009415SF3A110081.058ENSLOCG00000008251sf3a19981.863Lepisosteus_oculatus
ENSACAG00000009415SF3A110086.700ENSLAFG00000000448SF3A110086.207Loxodonta_africana
ENSACAG00000009415SF3A19956.158ENSLAFG00000026032-9956.127Loxodonta_africana
ENSACAG00000009415SF3A110085.049ENSMFAG00000031979SF3A110085.591Macaca_fascicularis
ENSACAG00000009415SF3A110085.049ENSMMUG00000005547SF3A110085.591Macaca_mulatta
ENSACAG00000009415SF3A110085.172ENSMNEG00000037229SF3A110085.714Macaca_nemestrina
ENSACAG00000009415SF3A110086.823ENSMLEG00000041908SF3A110085.591Mandrillus_leucophaeus
ENSACAG00000009415SF3A19882.763ENSMAMG00000006460sf3a19782.785Mastacembelus_armatus
ENSACAG00000009415SF3A110081.931ENSMZEG00005009633sf3a110081.807Maylandia_zebra
ENSACAG00000009415SF3A19689.004ENSMGAG00000001330SF3A19987.817Meleagris_gallopavo
ENSACAG00000009415SF3A19384.687ENSMAUG00000020317Sf3a110080.864Mesocricetus_auratus
ENSACAG00000009415SF3A110086.700ENSMICG00000010038SF3A110085.468Microcebus_murinus
ENSACAG00000009415SF3A110087.069ENSMOCG00000008438Sf3a110085.714Microtus_ochrogaster
ENSACAG00000009415SF3A110079.136ENSMMOG00000015588sf3a19978.616Mola_mola
ENSACAG00000009415SF3A110087.300ENSMODG00000009270SF3A110086.560Monodelphis_domestica
ENSACAG00000009415SF3A110081.088ENSMALG00000000148sf3a19982.713Monopterus_albus
ENSACAG00000009415SF3A110086.330MGP_CAROLIEiJ_G0016029Sf3a110085.714Mus_caroli
ENSACAG00000009415SF3A110086.330ENSMUSG00000002129Sf3a110085.714Mus_musculus
ENSACAG00000009415SF3A110086.453MGP_PahariEiJ_G0016862Sf3a110085.714Mus_pahari
ENSACAG00000009415SF3A110086.330MGP_SPRETEiJ_G0016870Sf3a110085.714Mus_spretus
ENSACAG00000009415SF3A110086.946ENSMPUG00000013144SF3A110085.714Mustela_putorius_furo
ENSACAG00000009415SF3A110087.192ENSMLUG00000002139SF3A110085.837Myotis_lucifugus
ENSACAG00000009415SF3A110087.438ENSNGAG00000016977Sf3a110085.714Nannospalax_galili
ENSACAG00000009415SF3A110081.852ENSNBRG00000016642sf3a110081.605Neolamprologus_brichardi
ENSACAG00000009415SF3A110086.823ENSNLEG00000003686SF3A110085.591Nomascus_leucogenys
ENSACAG00000009415SF3A19679.049ENSMEUG00000008741SF3A110079.177Notamacropus_eugenii
ENSACAG00000009415SF3A19788.761ENSOPRG00000016636SF3A110085.961Ochotona_princeps
ENSACAG00000009415SF3A110087.423ENSODEG00000002571SF3A110086.190Octodon_degus
ENSACAG00000009415SF3A110082.200ENSONIG00000010848sf3a110081.582Oreochromis_niloticus
ENSACAG00000009415SF3A110087.069ENSOCUG00000007633SF3A110085.714Oryctolagus_cuniculus
ENSACAG00000009415SF3A19680.000ENSORLG00000013050sf3a19980.412Oryzias_latipes
ENSACAG00000009415SF3A19977.985ENSORLG00020003236sf3a19779.067Oryzias_latipes_hni
ENSACAG00000009415SF3A110080.322ENSORLG00015017411sf3a110080.074Oryzias_latipes_hsok
ENSACAG00000009415SF3A110080.717ENSOMEG00000013362sf3a110079.852Oryzias_melastigma
ENSACAG00000009415SF3A110086.700ENSOGAG00000012931SF3A110085.468Otolemur_garnettii
ENSACAG00000009415SF3A110085.345ENSOARG00000006849SF3A110084.483Ovis_aries
ENSACAG00000009415SF3A110086.207ENSPPAG00000041790SF3A110084.606Pan_paniscus
ENSACAG00000009415SF3A110087.192ENSPPRG00000004391SF3A110085.837Panthera_pardus
ENSACAG00000009415SF3A19788.310ENSPTIG00000000844SF3A19987.229Panthera_tigris_altaica
ENSACAG00000009415SF3A110087.192ENSPTRG00000014240SF3A110085.591Pan_troglodytes
ENSACAG00000009415SF3A110086.823ENSPANG00000020772SF3A110085.591Papio_anubis
ENSACAG00000009415SF3A17794.505ENSPSIG00000012803SF3A19694.505Pelodiscus_sinensis
ENSACAG00000009415SF3A19780.101ENSPMGG00000023096sf3a110081.656Periophthalmus_magnuspinnatus
ENSACAG00000009415SF3A110087.069ENSPEMG00000009494Sf3a110085.714Peromyscus_maniculatus_bairdii
ENSACAG00000009415SF3A16877.372ENSPMAG00000007139-9377.636Petromyzon_marinus
ENSACAG00000009415SF3A110087.176ENSPCIG00000022692SF3A110086.436Phascolarctos_cinereus
ENSACAG00000009415SF3A110071.921ENSPFOG00000016768sf3a110071.921Poecilia_formosa
ENSACAG00000009415SF3A110080.864ENSPLAG00000017268sf3a110080.864Poecilia_latipinna
ENSACAG00000009415SF3A19781.818ENSPMEG00000019811sf3a19881.672Poecilia_mexicana
ENSACAG00000009415SF3A110080.741ENSPREG00000010347sf3a110080.988Poecilia_reticulata
ENSACAG00000009415SF3A110086.823ENSPPYG00000011707SF3A110085.591Pongo_abelii
ENSACAG00000009415SF3A15792.958ENSPCAG00000003266SF3A15792.823Procavia_capensis
ENSACAG00000009415SF3A110086.946ENSPCOG00000026630SF3A110085.591Propithecus_coquereli
ENSACAG00000009415SF3A110084.236ENSPVAG00000017719SF3A110084.049Pteropus_vampyrus
ENSACAG00000009415SF3A110082.178ENSPNYG00000018706sf3a110081.931Pundamilia_nyererei
ENSACAG00000009415SF3A19980.124ENSPNAG00000003721sf3a110080.721Pygocentrus_nattereri
ENSACAG00000009415SF3A110086.330ENSRNOG00000005218Sf3a110085.714Rattus_norvegicus
ENSACAG00000009415SF3A110086.823ENSRBIG00000032167SF3A110085.591Rhinopithecus_bieti
ENSACAG00000009415SF3A110086.823ENSRROG00000044908SF3A110085.591Rhinopithecus_roxellana
ENSACAG00000009415SF3A19388.298ENSSBOG00000021960SF3A19886.569Saimiri_boliviensis_boliviensis
ENSACAG00000009415SF3A19885.088ENSSHAG00000003666SF3A19785.260Sarcophilus_harrisii
ENSACAG00000009415SF3A110081.572ENSSFOG00015004579sf3a110082.801Scleropages_formosus
ENSACAG00000009415SF3A110078.616ENSSMAG00000004275sf3a110079.332Scophthalmus_maximus
ENSACAG00000009415SF3A110081.706ENSSDUG00000022219sf3a110080.964Seriola_dumerili
ENSACAG00000009415SF3A110081.706ENSSLDG00000012642sf3a110080.964Seriola_lalandi_dorsalis
ENSACAG00000009415SF3A19785.951ENSSARG00000005960SF3A19985.568Sorex_araneus
ENSACAG00000009415SF3A110087.897ENSSPUG00000018863SF3A110087.531Sphenodon_punctatus
ENSACAG00000009415SF3A110081.953ENSSPAG00000011856sf3a110081.706Stegastes_partitus
ENSACAG00000009415SF3A110087.069ENSSSCG00000010002SF3A110085.961Sus_scrofa
ENSACAG00000009415SF3A19689.548ENSTGUG00000010547SF3A110087.833Taeniopygia_guttata
ENSACAG00000009415SF3A110079.110ENSTRUG00000006118sf3a110078.589Takifugu_rubripes
ENSACAG00000009415SF3A16081.481ENSTNIG00000005713sf3a18986.607Tetraodon_nigroviridis
ENSACAG00000009415SF3A110080.542ENSTBEG00000012771SF3A110080.542Tupaia_belangeri
ENSACAG00000009415SF3A110086.839ENSTTRG00000001535SF3A110085.486Tursiops_truncatus
ENSACAG00000009415SF3A19986.228ENSUAMG00000006750SF3A19984.864Ursus_americanus
ENSACAG00000009415SF3A19887.657ENSUMAG00000016665SF3A19986.272Ursus_maritimus
ENSACAG00000009415SF3A110087.069ENSVVUG00000003075SF3A110085.714Vulpes_vulpes
ENSACAG00000009415SF3A110083.149ENSXETG00000016144sf3a19689.157Xenopus_tropicalis
ENSACAG00000009415SF3A110080.000ENSXCOG00000015653sf3a110080.247Xiphophorus_couchianus
ENSACAG00000009415SF3A110080.123ENSXMAG00000002753sf3a110080.370Xiphophorus_maculatus