EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000009415 (Gene tree)
Gene ID: 100557842
Gene Symbol: SF3A1
Alias: PRPF21|Prp21|SAP114|SF3a120
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 6753 bases
Position: chrGL343417.1:117453-124205
Accession: 100557842
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000009268	PRP21_like_P	PF12230.8	9.3e-53	1	1
ENSACAP00000009268	Surp	PF01805.20	3.8e-46	1	2
ENSACAP00000009268	Surp	PF01805.20	3.8e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000009461	SF3A1-201	2427	XM_003226835	ENSACAP00000009268	808 (aa)	XP_003226883	H9GF80

Gene Model

Click here to download ENSACAG00000009415's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000009415's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000009415	SF3A1	100	87.192	ENSG00000099995	SF3A1	100	85.591	Homo_sapiens
ENSACAG00000009415	SF3A1	100	82.346	ENSAPOG00000020465	sf3a1	100	81.852	Acanthochromis_polyacanthus
ENSACAG00000009415	SF3A1	97	88.310	ENSAMEG00000007737	SF3A1	100	85.749	Ailuropoda_melanoleuca
ENSACAG00000009415	SF3A1	100	81.852	ENSACIG00000020672	sf3a1	100	81.605	Amphilophus_citrinellus
ENSACAG00000009415	SF3A1	100	82.099	ENSAOCG00000003060	sf3a1	100	81.481	Amphiprion_ocellaris
ENSACAG00000009415	SF3A1	100	82.099	ENSAPEG00000010735	sf3a1	100	81.852	Amphiprion_percula
ENSACAG00000009415	SF3A1	97	83.014	ENSATEG00000021201	sf3a1	99	81.266	Anabas_testudineus
ENSACAG00000009415	SF3A1	96	89.535	ENSAPLG00000009057	SF3A1	99	87.833	Anas_platyrhynchos
ENSACAG00000009415	SF3A1	100	86.946	ENSANAG00000032045	SF3A1	100	85.591	Aotus_nancymaae
ENSACAG00000009415	SF3A1	100	81.931	ENSACLG00000012622	sf3a1	100	81.807	Astatotilapia_calliptera
ENSACAG00000009415	SF3A1	99	80.497	ENSAMXG00000005382	sf3a1	100	81.118	Astyanax_mexicanus
ENSACAG00000009415	SF3A1	100	87.315	ENSBTAG00000003390	SF3A1	100	85.961	Bos_taurus
ENSACAG00000009415	SF3A1	79	44.860	WBGene00004188	prp-21	94	42.553	Caenorhabditis_elegans
ENSACAG00000009415	SF3A1	100	87.069	ENSCJAG00000010370	SF3A1	100	85.714	Callithrix_jacchus
ENSACAG00000009415	SF3A1	100	87.069	ENSCAFG00000012559	SF3A1	100	85.714	Canis_familiaris
ENSACAG00000009415	SF3A1	100	87.069	ENSCAFG00020000838	SF3A1	100	85.714	Canis_lupus_dingo
ENSACAG00000009415	SF3A1	100	87.438	ENSCHIG00000018642	SF3A1	100	86.084	Capra_hircus
ENSACAG00000009415	SF3A1	100	87.069	ENSTSYG00000004739	SF3A1	100	85.714	Carlito_syrichta
ENSACAG00000009415	SF3A1	95	72.715	ENSCAPG00000015414	SF3A1	98	72.324	Cavia_aperea
ENSACAG00000009415	SF3A1	100	87.685	ENSCPOG00000014589	SF3A1	100	85.961	Cavia_porcellus
ENSACAG00000009415	SF3A1	100	86.946	ENSCCAG00000032006	SF3A1	100	85.591	Cebus_capucinus
ENSACAG00000009415	SF3A1	100	86.823	ENSCATG00000029241	SF3A1	100	85.591	Cercocebus_atys
ENSACAG00000009415	SF3A1	100	87.192	ENSCLAG00000006508	SF3A1	100	85.961	Chinchilla_lanigera
ENSACAG00000009415	SF3A1	100	86.823	ENSCSAG00000009470	SF3A1	100	85.591	Chlorocebus_sabaeus
ENSACAG00000009415	SF3A1	57	93.258	ENSCHOG00000005201	SF3A1	68	93.578	Choloepus_hoffmanni
ENSACAG00000009415	SF3A1	100	88.366	ENSCPBG00000007595	SF3A1	100	87.624	Chrysemys_picta_bellii
ENSACAG00000009415	SF3A1	95	50.704	ENSCING00000008526	-	97	50.501	Ciona_intestinalis
ENSACAG00000009415	SF3A1	95	59.859	ENSCSAVG00000005608	-	91	64.912	Ciona_savignyi
ENSACAG00000009415	SF3A1	100	86.823	ENSCANG00000033564	SF3A1	100	85.591	Colobus_angolensis_palliatus
ENSACAG00000009415	SF3A1	100	87.069	ENSCGRG00001008933	Sf3a1	100	85.714	Cricetulus_griseus_chok1gshd
ENSACAG00000009415	SF3A1	100	87.069	ENSCGRG00000006127	Sf3a1	100	85.714	Cricetulus_griseus_crigri
ENSACAG00000009415	SF3A1	100	79.383	ENSCSEG00000010792	sf3a1	100	79.877	Cynoglossus_semilaevis
ENSACAG00000009415	SF3A1	100	80.247	ENSCVAG00000004560	sf3a1	100	79.506	Cyprinodon_variegatus
ENSACAG00000009415	SF3A1	100	79.753	ENSDARG00000041887	sf3a1	100	82.873	Danio_rerio
ENSACAG00000009415	SF3A1	98	87.925	ENSDNOG00000010629	SF3A1	100	85.258	Dasypus_novemcinctus
ENSACAG00000009415	SF3A1	100	87.315	ENSDORG00000005613	Sf3a1	100	85.591	Dipodomys_ordii
ENSACAG00000009415	SF3A1	80	61.131	FBgn0266917	Sf3a1	87	59.397	Drosophila_melanogaster
ENSACAG00000009415	SF3A1	85	88.047	ENSETEG00000017194	SF3A1	100	83.402	Echinops_telfairi
ENSACAG00000009415	SF3A1	97	68.344	ENSEBUG00000001285	sf3a1	96	67.643	Eptatretus_burgeri
ENSACAG00000009415	SF3A1	100	87.562	ENSEASG00005010254	SF3A1	100	86.207	Equus_asinus_asinus
ENSACAG00000009415	SF3A1	100	87.562	ENSECAG00000023962	SF3A1	100	86.207	Equus_caballus
ENSACAG00000009415	SF3A1	74	91.803	ENSEEUG00000003159	SF3A1	82	91.803	Erinaceus_europaeus
ENSACAG00000009415	SF3A1	100	79.531	ENSELUG00000022578	sf3a1	100	77.654	Esox_lucius
ENSACAG00000009415	SF3A1	100	87.192	ENSFCAG00000011932	SF3A1	100	85.837	Felis_catus
ENSACAG00000009415	SF3A1	96	88.616	ENSFALG00000006944	SF3A1	100	86.527	Ficedula_albicollis
ENSACAG00000009415	SF3A1	100	87.069	ENSFDAG00000009560	SF3A1	100	85.837	Fukomys_damarensis
ENSACAG00000009415	SF3A1	100	80.864	ENSFHEG00000010866	sf3a1	100	81.358	Fundulus_heteroclitus
ENSACAG00000009415	SF3A1	100	78.713	ENSGMOG00000016024	sf3a1	100	77.669	Gadus_morhua
ENSACAG00000009415	SF3A1	96	89.521	ENSGALG00000007937	SF3A1	100	87.145	Gallus_gallus
ENSACAG00000009415	SF3A1	100	80.123	ENSGAFG00000009111	sf3a1	100	80.370	Gambusia_affinis
ENSACAG00000009415	SF3A1	100	80.074	ENSGACG00000011893	sf3a1	100	79.332	Gasterosteus_aculeatus
ENSACAG00000009415	SF3A1	96	87.742	ENSGAGG00000000762	SF3A1	99	86.968	Gopherus_agassizii
ENSACAG00000009415	SF3A1	100	87.192	ENSGGOG00000012631	SF3A1	100	85.591	Gorilla_gorilla
ENSACAG00000009415	SF3A1	100	82.178	ENSHBUG00000015795	sf3a1	100	81.931	Haplochromis_burtoni
ENSACAG00000009415	SF3A1	100	87.315	ENSHGLG00000007907	SF3A1	100	85.961	Heterocephalus_glaber_female
ENSACAG00000009415	SF3A1	100	87.315	ENSHGLG00100013799	SF3A1	100	85.961	Heterocephalus_glaber_male
ENSACAG00000009415	SF3A1	100	78.492	ENSHCOG00000015423	sf3a1	100	77.627	Hippocampus_comes
ENSACAG00000009415	SF3A1	97	79.721	ENSIPUG00000002470	sf3a1	99	80.862	Ictalurus_punctatus
ENSACAG00000009415	SF3A1	100	87.192	ENSSTOG00000013892	SF3A1	100	85.837	Ictidomys_tridecemlineatus
ENSACAG00000009415	SF3A1	100	87.085	ENSJJAG00000022566	Sf3a1	100	85.732	Jaculus_jaculus
ENSACAG00000009415	SF3A1	100	80.593	ENSKMAG00000002400	sf3a1	100	80.617	Kryptolebias_marmoratus
ENSACAG00000009415	SF3A1	100	80.717	ENSLBEG00000022974	sf3a1	100	80.593	Labrus_bergylta
ENSACAG00000009415	SF3A1	100	83.210	ENSLACG00000003565	SF3A1	100	83.086	Latimeria_chalumnae
ENSACAG00000009415	SF3A1	100	81.058	ENSLOCG00000008251	sf3a1	99	81.863	Lepisosteus_oculatus
ENSACAG00000009415	SF3A1	100	86.700	ENSLAFG00000000448	SF3A1	100	86.207	Loxodonta_africana
ENSACAG00000009415	SF3A1	99	56.158	ENSLAFG00000026032	-	99	56.127	Loxodonta_africana
ENSACAG00000009415	SF3A1	100	85.049	ENSMFAG00000031979	SF3A1	100	85.591	Macaca_fascicularis
ENSACAG00000009415	SF3A1	100	85.049	ENSMMUG00000005547	SF3A1	100	85.591	Macaca_mulatta
ENSACAG00000009415	SF3A1	100	85.172	ENSMNEG00000037229	SF3A1	100	85.714	Macaca_nemestrina
ENSACAG00000009415	SF3A1	100	86.823	ENSMLEG00000041908	SF3A1	100	85.591	Mandrillus_leucophaeus
ENSACAG00000009415	SF3A1	98	82.763	ENSMAMG00000006460	sf3a1	97	82.785	Mastacembelus_armatus
ENSACAG00000009415	SF3A1	100	81.931	ENSMZEG00005009633	sf3a1	100	81.807	Maylandia_zebra
ENSACAG00000009415	SF3A1	96	89.004	ENSMGAG00000001330	SF3A1	99	87.817	Meleagris_gallopavo
ENSACAG00000009415	SF3A1	93	84.687	ENSMAUG00000020317	Sf3a1	100	80.864	Mesocricetus_auratus
ENSACAG00000009415	SF3A1	100	86.700	ENSMICG00000010038	SF3A1	100	85.468	Microcebus_murinus
ENSACAG00000009415	SF3A1	100	87.069	ENSMOCG00000008438	Sf3a1	100	85.714	Microtus_ochrogaster
ENSACAG00000009415	SF3A1	100	79.136	ENSMMOG00000015588	sf3a1	99	78.616	Mola_mola
ENSACAG00000009415	SF3A1	100	87.300	ENSMODG00000009270	SF3A1	100	86.560	Monodelphis_domestica
ENSACAG00000009415	SF3A1	100	81.088	ENSMALG00000000148	sf3a1	99	82.713	Monopterus_albus
ENSACAG00000009415	SF3A1	100	86.330	MGP_CAROLIEiJ_G0016029	Sf3a1	100	85.714	Mus_caroli
ENSACAG00000009415	SF3A1	100	86.330	ENSMUSG00000002129	Sf3a1	100	85.714	Mus_musculus
ENSACAG00000009415	SF3A1	100	86.453	MGP_PahariEiJ_G0016862	Sf3a1	100	85.714	Mus_pahari
ENSACAG00000009415	SF3A1	100	86.330	MGP_SPRETEiJ_G0016870	Sf3a1	100	85.714	Mus_spretus
ENSACAG00000009415	SF3A1	100	86.946	ENSMPUG00000013144	SF3A1	100	85.714	Mustela_putorius_furo
ENSACAG00000009415	SF3A1	100	87.192	ENSMLUG00000002139	SF3A1	100	85.837	Myotis_lucifugus
ENSACAG00000009415	SF3A1	100	87.438	ENSNGAG00000016977	Sf3a1	100	85.714	Nannospalax_galili
ENSACAG00000009415	SF3A1	100	81.852	ENSNBRG00000016642	sf3a1	100	81.605	Neolamprologus_brichardi
ENSACAG00000009415	SF3A1	100	86.823	ENSNLEG00000003686	SF3A1	100	85.591	Nomascus_leucogenys
ENSACAG00000009415	SF3A1	96	79.049	ENSMEUG00000008741	SF3A1	100	79.177	Notamacropus_eugenii
ENSACAG00000009415	SF3A1	97	88.761	ENSOPRG00000016636	SF3A1	100	85.961	Ochotona_princeps
ENSACAG00000009415	SF3A1	100	87.423	ENSODEG00000002571	SF3A1	100	86.190	Octodon_degus
ENSACAG00000009415	SF3A1	100	82.200	ENSONIG00000010848	sf3a1	100	81.582	Oreochromis_niloticus
ENSACAG00000009415	SF3A1	100	87.069	ENSOCUG00000007633	SF3A1	100	85.714	Oryctolagus_cuniculus
ENSACAG00000009415	SF3A1	96	80.000	ENSORLG00000013050	sf3a1	99	80.412	Oryzias_latipes
ENSACAG00000009415	SF3A1	99	77.985	ENSORLG00020003236	sf3a1	97	79.067	Oryzias_latipes_hni
ENSACAG00000009415	SF3A1	100	80.322	ENSORLG00015017411	sf3a1	100	80.074	Oryzias_latipes_hsok
ENSACAG00000009415	SF3A1	100	80.717	ENSOMEG00000013362	sf3a1	100	79.852	Oryzias_melastigma
ENSACAG00000009415	SF3A1	100	86.700	ENSOGAG00000012931	SF3A1	100	85.468	Otolemur_garnettii
ENSACAG00000009415	SF3A1	100	85.345	ENSOARG00000006849	SF3A1	100	84.483	Ovis_aries
ENSACAG00000009415	SF3A1	100	86.207	ENSPPAG00000041790	SF3A1	100	84.606	Pan_paniscus
ENSACAG00000009415	SF3A1	100	87.192	ENSPPRG00000004391	SF3A1	100	85.837	Panthera_pardus
ENSACAG00000009415	SF3A1	97	88.310	ENSPTIG00000000844	SF3A1	99	87.229	Panthera_tigris_altaica
ENSACAG00000009415	SF3A1	100	87.192	ENSPTRG00000014240	SF3A1	100	85.591	Pan_troglodytes
ENSACAG00000009415	SF3A1	100	86.823	ENSPANG00000020772	SF3A1	100	85.591	Papio_anubis
ENSACAG00000009415	SF3A1	77	94.505	ENSPSIG00000012803	SF3A1	96	94.505	Pelodiscus_sinensis
ENSACAG00000009415	SF3A1	97	80.101	ENSPMGG00000023096	sf3a1	100	81.656	Periophthalmus_magnuspinnatus
ENSACAG00000009415	SF3A1	100	87.069	ENSPEMG00000009494	Sf3a1	100	85.714	Peromyscus_maniculatus_bairdii
ENSACAG00000009415	SF3A1	68	77.372	ENSPMAG00000007139	-	93	77.636	Petromyzon_marinus
ENSACAG00000009415	SF3A1	100	87.176	ENSPCIG00000022692	SF3A1	100	86.436	Phascolarctos_cinereus
ENSACAG00000009415	SF3A1	100	71.921	ENSPFOG00000016768	sf3a1	100	71.921	Poecilia_formosa
ENSACAG00000009415	SF3A1	100	80.864	ENSPLAG00000017268	sf3a1	100	80.864	Poecilia_latipinna
ENSACAG00000009415	SF3A1	97	81.818	ENSPMEG00000019811	sf3a1	98	81.672	Poecilia_mexicana
ENSACAG00000009415	SF3A1	100	80.741	ENSPREG00000010347	sf3a1	100	80.988	Poecilia_reticulata
ENSACAG00000009415	SF3A1	100	86.823	ENSPPYG00000011707	SF3A1	100	85.591	Pongo_abelii
ENSACAG00000009415	SF3A1	57	92.958	ENSPCAG00000003266	SF3A1	57	92.823	Procavia_capensis
ENSACAG00000009415	SF3A1	100	86.946	ENSPCOG00000026630	SF3A1	100	85.591	Propithecus_coquereli
ENSACAG00000009415	SF3A1	100	84.236	ENSPVAG00000017719	SF3A1	100	84.049	Pteropus_vampyrus
ENSACAG00000009415	SF3A1	100	82.178	ENSPNYG00000018706	sf3a1	100	81.931	Pundamilia_nyererei
ENSACAG00000009415	SF3A1	99	80.124	ENSPNAG00000003721	sf3a1	100	80.721	Pygocentrus_nattereri
ENSACAG00000009415	SF3A1	100	86.330	ENSRNOG00000005218	Sf3a1	100	85.714	Rattus_norvegicus
ENSACAG00000009415	SF3A1	100	86.823	ENSRBIG00000032167	SF3A1	100	85.591	Rhinopithecus_bieti
ENSACAG00000009415	SF3A1	100	86.823	ENSRROG00000044908	SF3A1	100	85.591	Rhinopithecus_roxellana
ENSACAG00000009415	SF3A1	93	88.298	ENSSBOG00000021960	SF3A1	98	86.569	Saimiri_boliviensis_boliviensis
ENSACAG00000009415	SF3A1	98	85.088	ENSSHAG00000003666	SF3A1	97	85.260	Sarcophilus_harrisii
ENSACAG00000009415	SF3A1	100	81.572	ENSSFOG00015004579	sf3a1	100	82.801	Scleropages_formosus
ENSACAG00000009415	SF3A1	100	78.616	ENSSMAG00000004275	sf3a1	100	79.332	Scophthalmus_maximus
ENSACAG00000009415	SF3A1	100	81.706	ENSSDUG00000022219	sf3a1	100	80.964	Seriola_dumerili
ENSACAG00000009415	SF3A1	100	81.706	ENSSLDG00000012642	sf3a1	100	80.964	Seriola_lalandi_dorsalis
ENSACAG00000009415	SF3A1	97	85.951	ENSSARG00000005960	SF3A1	99	85.568	Sorex_araneus
ENSACAG00000009415	SF3A1	100	87.897	ENSSPUG00000018863	SF3A1	100	87.531	Sphenodon_punctatus
ENSACAG00000009415	SF3A1	100	81.953	ENSSPAG00000011856	sf3a1	100	81.706	Stegastes_partitus
ENSACAG00000009415	SF3A1	100	87.069	ENSSSCG00000010002	SF3A1	100	85.961	Sus_scrofa
ENSACAG00000009415	SF3A1	96	89.548	ENSTGUG00000010547	SF3A1	100	87.833	Taeniopygia_guttata
ENSACAG00000009415	SF3A1	100	79.110	ENSTRUG00000006118	sf3a1	100	78.589	Takifugu_rubripes
ENSACAG00000009415	SF3A1	60	81.481	ENSTNIG00000005713	sf3a1	89	86.607	Tetraodon_nigroviridis
ENSACAG00000009415	SF3A1	100	80.542	ENSTBEG00000012771	SF3A1	100	80.542	Tupaia_belangeri
ENSACAG00000009415	SF3A1	100	86.839	ENSTTRG00000001535	SF3A1	100	85.486	Tursiops_truncatus
ENSACAG00000009415	SF3A1	99	86.228	ENSUAMG00000006750	SF3A1	99	84.864	Ursus_americanus
ENSACAG00000009415	SF3A1	98	87.657	ENSUMAG00000016665	SF3A1	99	86.272	Ursus_maritimus
ENSACAG00000009415	SF3A1	100	87.069	ENSVVUG00000003075	SF3A1	100	85.714	Vulpes_vulpes
ENSACAG00000009415	SF3A1	100	83.149	ENSXETG00000016144	sf3a1	96	89.157	Xenopus_tropicalis
ENSACAG00000009415	SF3A1	100	80.000	ENSXCOG00000015653	sf3a1	100	80.247	Xiphophorus_couchianus
ENSACAG00000009415	SF3A1	100	80.123	ENSXMAG00000002753	sf3a1	100	80.370	Xiphophorus_maculatus