EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000009612 (Gene tree)
Gene ID: 100559157
Gene Symbol: SF3B1
Alias: Hsh155|PRPF10|Prp10|SAP155|SF3b155
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 47369 bases
Position: chrGL343436.1:731405-778773
Accession: 100559157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000009477	SF3b1	PF08920.10	6.5e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000009674	SF3B1-201	7722	XM_003226996	ENSACAP00000009477	1302 (aa)	XP_003227044	H9GFG8

Gene Model

Click here to download ENSACAG00000009612's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000009612's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000009612	SF3B1	100	98.850	ENSG00000115524	SF3B1	100	98.850	Homo_sapiens
ENSACAG00000009612	SF3B1	100	93.541	ENSAPOG00000011894	sf3b1	100	93.541	Acanthochromis_polyacanthus
ENSACAG00000009612	SF3B1	99	98.843	ENSAMEG00000013809	SF3B1	99	98.843	Ailuropoda_melanoleuca
ENSACAG00000009612	SF3B1	100	92.982	ENSACIG00000020910	sf3b1	97	92.982	Amphilophus_citrinellus
ENSACAG00000009612	SF3B1	100	93.541	ENSAOCG00000004478	sf3b1	100	93.541	Amphiprion_ocellaris
ENSACAG00000009612	SF3B1	100	93.541	ENSAPEG00000012937	sf3b1	100	93.541	Amphiprion_percula
ENSACAG00000009612	SF3B1	100	93.840	ENSATEG00000020435	sf3b1	100	93.840	Anabas_testudineus
ENSACAG00000009612	SF3B1	99	99.072	ENSAPLG00000003993	SF3B1	99	99.072	Anas_platyrhynchos
ENSACAG00000009612	SF3B1	100	98.850	ENSANAG00000021577	SF3B1	100	99.223	Aotus_nancymaae
ENSACAG00000009612	SF3B1	100	92.624	ENSACLG00000023470	sf3b1	100	92.624	Astatotilapia_calliptera
ENSACAG00000009612	SF3B1	100	93.916	ENSAMXG00000002219	sf3b1	100	93.916	Astyanax_mexicanus
ENSACAG00000009612	SF3B1	100	98.773	ENSBTAG00000008915	SF3B1	100	98.773	Bos_taurus
ENSACAG00000009612	SF3B1	98	66.465	WBGene00011605	sftb-1	98	66.465	Caenorhabditis_elegans
ENSACAG00000009612	SF3B1	100	98.850	ENSCJAG00000003902	SF3B1	100	98.850	Callithrix_jacchus
ENSACAG00000009612	SF3B1	100	98.850	ENSCAFG00000010826	SF3B1	100	98.850	Canis_familiaris
ENSACAG00000009612	SF3B1	100	98.850	ENSCAFG00020004750	SF3B1	100	98.850	Canis_lupus_dingo
ENSACAG00000009612	SF3B1	100	98.773	ENSCHIG00000015226	SF3B1	100	98.773	Capra_hircus
ENSACAG00000009612	SF3B1	100	98.773	ENSTSYG00000009214	SF3B1	100	98.773	Carlito_syrichta
ENSACAG00000009612	SF3B1	99	98.919	ENSCAPG00000006547	SF3B1	99	98.919	Cavia_aperea
ENSACAG00000009612	SF3B1	99	98.919	ENSCPOG00000009353	SF3B1	100	98.918	Cavia_porcellus
ENSACAG00000009612	SF3B1	100	98.850	ENSCCAG00000020506	SF3B1	100	98.850	Cebus_capucinus
ENSACAG00000009612	SF3B1	100	98.850	ENSCATG00000035735	SF3B1	100	98.850	Cercocebus_atys
ENSACAG00000009612	SF3B1	99	98.919	ENSCLAG00000014767	SF3B1	99	98.919	Chinchilla_lanigera
ENSACAG00000009612	SF3B1	100	98.850	ENSCSAG00000011505	SF3B1	100	98.850	Chlorocebus_sabaeus
ENSACAG00000009612	SF3B1	76	96.923	ENSCHOG00000009860	SF3B1	76	96.875	Choloepus_hoffmanni
ENSACAG00000009612	SF3B1	100	99.155	ENSCPBG00000021902	SF3B1	100	99.321	Chrysemys_picta_bellii
ENSACAG00000009612	SF3B1	68	77.974	ENSCING00000002558	-	99	78.667	Ciona_intestinalis
ENSACAG00000009612	SF3B1	99	79.697	ENSCSAVG00000002559	-	99	79.545	Ciona_savignyi
ENSACAG00000009612	SF3B1	100	98.850	ENSCANG00000029415	SF3B1	100	98.850	Colobus_angolensis_palliatus
ENSACAG00000009612	SF3B1	100	98.850	ENSCGRG00001016990	Sf3b1	100	98.850	Cricetulus_griseus_chok1gshd
ENSACAG00000009612	SF3B1	100	98.850	ENSCGRG00000005301	Sf3b1	100	98.850	Cricetulus_griseus_crigri
ENSACAG00000009612	SF3B1	100	89.931	ENSCSEG00000003860	sf3b1	100	89.931	Cynoglossus_semilaevis
ENSACAG00000009612	SF3B1	96	93.671	ENSCVAG00000003680	sf3b1	99	93.671	Cyprinodon_variegatus
ENSACAG00000009612	SF3B1	100	93.465	ENSDARG00000056138	sf3b1	100	93.465	Danio_rerio
ENSACAG00000009612	SF3B1	100	98.774	ENSDNOG00000011754	SF3B1	100	98.774	Dasypus_novemcinctus
ENSACAG00000009612	SF3B1	99	96.368	ENSDORG00000002399	Sf3b1	100	96.368	Dipodomys_ordii
ENSACAG00000009612	SF3B1	100	76.453	FBgn0031266	Sf3b1	100	76.453	Drosophila_melanogaster
ENSACAG00000009612	SF3B1	83	98.330	ENSETEG00000009188	SF3B1	100	98.330	Echinops_telfairi
ENSACAG00000009612	SF3B1	99	87.030	ENSEBUG00000004325	sf3b1	100	89.748	Eptatretus_burgeri
ENSACAG00000009612	SF3B1	100	98.850	ENSEASG00005020159	SF3B1	98	98.850	Equus_asinus_asinus
ENSACAG00000009612	SF3B1	100	98.850	ENSECAG00000021657	SF3B1	98	98.850	Equus_caballus
ENSACAG00000009612	SF3B1	87	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSACAG00000009612	SF3B1	100	92.825	ENSELUG00000005977	sf3b1	98	93.051	Esox_lucius
ENSACAG00000009612	SF3B1	100	98.850	ENSFCAG00000005038	SF3B1	100	98.850	Felis_catus
ENSACAG00000009612	SF3B1	99	98.995	ENSFALG00000004281	SF3B1	99	98.995	Ficedula_albicollis
ENSACAG00000009612	SF3B1	100	98.850	ENSFDAG00000017510	SF3B1	100	98.850	Fukomys_damarensis
ENSACAG00000009612	SF3B1	100	92.781	ENSFHEG00000014333	sf3b1	100	92.781	Fundulus_heteroclitus
ENSACAG00000009612	SF3B1	100	93.526	ENSGMOG00000006773	sf3b1	100	93.526	Gadus_morhua
ENSACAG00000009612	SF3B1	100	99.002	ENSGALG00000008038	SF3B1	100	99.002	Gallus_gallus
ENSACAG00000009612	SF3B1	100	91.985	ENSGAFG00000000704	sf3b1	99	93.591	Gambusia_affinis
ENSACAG00000009612	SF3B1	100	93.140	ENSGACG00000008839	sf3b1	100	93.598	Gasterosteus_aculeatus
ENSACAG00000009612	SF3B1	100	98.474	ENSGAGG00000017478	SF3B1	100	98.474	Gopherus_agassizii
ENSACAG00000009612	SF3B1	99	92.172	ENSGGOG00000009264	SF3B1	99	93.154	Gorilla_gorilla
ENSACAG00000009612	SF3B1	99	92.688	ENSHBUG00000007705	sf3b1	99	92.688	Haplochromis_burtoni
ENSACAG00000009612	SF3B1	99	98.919	ENSHGLG00000008285	-	99	98.919	Heterocephalus_glaber_female
ENSACAG00000009612	SF3B1	99	96.911	ENSHGLG00100005535	-	99	96.911	Heterocephalus_glaber_male
ENSACAG00000009612	SF3B1	100	92.819	ENSHCOG00000016775	sf3b1	100	92.895	Hippocampus_comes
ENSACAG00000009612	SF3B1	100	93.992	ENSIPUG00000013171	sf3b1	100	93.992	Ictalurus_punctatus
ENSACAG00000009612	SF3B1	100	98.850	ENSSTOG00000011034	SF3B1	100	98.850	Ictidomys_tridecemlineatus
ENSACAG00000009612	SF3B1	99	98.837	ENSJJAG00000010903	Sf3b1	99	98.837	Jaculus_jaculus
ENSACAG00000009612	SF3B1	100	92.873	ENSKMAG00000004009	sf3b1	100	92.949	Kryptolebias_marmoratus
ENSACAG00000009612	SF3B1	100	93.583	ENSLBEG00000022208	sf3b1	100	93.583	Labrus_bergylta
ENSACAG00000009612	SF3B1	99	92.184	ENSLACG00000014832	SF3B1	99	92.107	Latimeria_chalumnae
ENSACAG00000009612	SF3B1	100	94.989	ENSLOCG00000003899	sf3b1	100	94.989	Lepisosteus_oculatus
ENSACAG00000009612	SF3B1	100	98.850	ENSLAFG00000001956	SF3B1	100	98.850	Loxodonta_africana
ENSACAG00000009612	SF3B1	99	98.919	ENSMMUG00000022430	SF3B1	99	98.919	Macaca_mulatta
ENSACAG00000009612	SF3B1	100	98.850	ENSMNEG00000042333	SF3B1	100	99.223	Macaca_nemestrina
ENSACAG00000009612	SF3B1	94	92.451	ENSMLEG00000026141	SF3B1	99	92.748	Mandrillus_leucophaeus
ENSACAG00000009612	SF3B1	100	93.764	ENSMAMG00000010241	sf3b1	100	93.764	Mastacembelus_armatus
ENSACAG00000009612	SF3B1	100	92.624	ENSMZEG00005021254	sf3b1	100	92.624	Maylandia_zebra
ENSACAG00000009612	SF3B1	99	98.453	ENSMGAG00000007017	SF3B1	99	98.453	Meleagris_gallopavo
ENSACAG00000009612	SF3B1	99	94.517	ENSMAUG00000009071	Sf3b1	99	94.672	Mesocricetus_auratus
ENSACAG00000009612	SF3B1	100	98.773	ENSMICG00000013879	SF3B1	100	98.773	Microcebus_murinus
ENSACAG00000009612	SF3B1	99	94.444	ENSMOCG00000000455	Sf3b1	99	94.444	Microtus_ochrogaster
ENSACAG00000009612	SF3B1	83	93.053	ENSMMOG00000000475	sf3b1	100	93.053	Mola_mola
ENSACAG00000009612	SF3B1	100	98.619	ENSMODG00000012275	SF3B1	100	98.619	Monodelphis_domestica
ENSACAG00000009612	SF3B1	100	93.688	ENSMALG00000017211	sf3b1	100	93.688	Monopterus_albus
ENSACAG00000009612	SF3B1	100	98.850	MGP_CAROLIEiJ_G0014141	Sf3b1	100	98.850	Mus_caroli
ENSACAG00000009612	SF3B1	100	98.850	ENSMUSG00000025982	Sf3b1	100	98.850	Mus_musculus
ENSACAG00000009612	SF3B1	100	98.850	MGP_SPRETEiJ_G0014947	Sf3b1	100	98.850	Mus_spretus
ENSACAG00000009612	SF3B1	100	98.850	ENSMPUG00000007799	SF3B1	100	98.850	Mustela_putorius_furo
ENSACAG00000009612	SF3B1	100	97.623	ENSMLUG00000000840	SF3B1	100	97.623	Myotis_lucifugus
ENSACAG00000009612	SF3B1	99	98.918	ENSNGAG00000021884	-	99	98.918	Nannospalax_galili
ENSACAG00000009612	SF3B1	100	88.796	ENSNBRG00000015816	sf3b1	100	88.796	Neolamprologus_brichardi
ENSACAG00000009612	SF3B1	100	98.850	ENSNLEG00000006861	SF3B1	100	98.850	Nomascus_leucogenys
ENSACAG00000009612	SF3B1	70	100.000	ENSMEUG00000015848	-	67	100.000	Notamacropus_eugenii
ENSACAG00000009612	SF3B1	100	87.040	ENSOPRG00000008596	SF3B1	100	87.040	Ochotona_princeps
ENSACAG00000009612	SF3B1	100	98.850	ENSODEG00000011153	-	100	98.850	Octodon_degus
ENSACAG00000009612	SF3B1	100	92.624	ENSONIG00000013758	sf3b1	100	92.624	Oreochromis_niloticus
ENSACAG00000009612	SF3B1	83	98.432	ENSOCUG00000012722	-	96	98.432	Oryctolagus_cuniculus
ENSACAG00000009612	SF3B1	100	93.308	ENSORLG00000020219	sf3b1	100	93.308	Oryzias_latipes
ENSACAG00000009612	SF3B1	100	93.308	ENSORLG00020001746	sf3b1	100	93.308	Oryzias_latipes_hni
ENSACAG00000009612	SF3B1	64	90.822	ENSORLG00015001759	sf3b1	98	90.822	Oryzias_latipes_hsok
ENSACAG00000009612	SF3B1	100	93.465	ENSOMEG00000019231	sf3b1	100	93.465	Oryzias_melastigma
ENSACAG00000009612	SF3B1	100	98.773	ENSOARG00000015374	SF3B1	100	98.773	Ovis_aries
ENSACAG00000009612	SF3B1	100	98.850	ENSPPAG00000035007	SF3B1	100	98.850	Pan_paniscus
ENSACAG00000009612	SF3B1	100	98.850	ENSPPRG00000009090	SF3B1	100	98.850	Panthera_pardus
ENSACAG00000009612	SF3B1	100	98.850	ENSPTIG00000021557	SF3B1	100	98.850	Panthera_tigris_altaica
ENSACAG00000009612	SF3B1	99	90.447	ENSPTRG00000012771	SF3B1	99	90.601	Pan_troglodytes
ENSACAG00000009612	SF3B1	100	98.850	ENSPANG00000013417	SF3B1	100	98.850	Papio_anubis
ENSACAG00000009612	SF3B1	100	94.973	ENSPKIG00000000784	sf3b1	100	94.973	Paramormyrops_kingsleyae
ENSACAG00000009612	SF3B1	99	97.910	ENSPSIG00000017222	SF3B1	98	97.910	Pelodiscus_sinensis
ENSACAG00000009612	SF3B1	90	93.845	ENSPMGG00000004330	sf3b1	99	93.845	Periophthalmus_magnuspinnatus
ENSACAG00000009612	SF3B1	99	98.919	ENSPEMG00000010699	Sf3b1	100	98.919	Peromyscus_maniculatus_bairdii
ENSACAG00000009612	SF3B1	100	89.962	ENSPMAG00000001311	sf3b1	100	90.114	Petromyzon_marinus
ENSACAG00000009612	SF3B1	100	98.542	ENSPCIG00000010642	SF3B1	100	98.542	Phascolarctos_cinereus
ENSACAG00000009612	SF3B1	100	93.470	ENSPFOG00000000073	sf3b1	100	93.470	Poecilia_formosa
ENSACAG00000009612	SF3B1	100	93.541	ENSPLAG00000002293	sf3b1	100	93.541	Poecilia_latipinna
ENSACAG00000009612	SF3B1	100	93.541	ENSPMEG00000000446	sf3b1	98	93.541	Poecilia_mexicana
ENSACAG00000009612	SF3B1	100	93.617	ENSPREG00000019652	sf3b1	100	93.617	Poecilia_reticulata
ENSACAG00000009612	SF3B1	100	98.266	ENSPPYG00000013044	SF3B1	96	98.266	Pongo_abelii
ENSACAG00000009612	SF3B1	100	98.696	ENSPCAG00000009292	SF3B1	100	98.696	Procavia_capensis
ENSACAG00000009612	SF3B1	100	98.773	ENSPCOG00000024074	SF3B1	100	98.773	Propithecus_coquereli
ENSACAG00000009612	SF3B1	100	98.850	ENSPVAG00000008302	SF3B1	100	98.850	Pteropus_vampyrus
ENSACAG00000009612	SF3B1	100	92.548	ENSPNYG00000014939	sf3b1	100	92.548	Pundamilia_nyererei
ENSACAG00000009612	SF3B1	100	93.840	ENSPNAG00000008288	sf3b1	100	93.916	Pygocentrus_nattereri
ENSACAG00000009612	SF3B1	100	98.850	ENSRNOG00000013516	Sf3b1	100	98.850	Rattus_norvegicus
ENSACAG00000009612	SF3B1	99	95.161	ENSRBIG00000026096	SF3B1	100	95.161	Rhinopithecus_bieti
ENSACAG00000009612	SF3B1	100	98.850	ENSRROG00000031308	SF3B1	100	98.850	Rhinopithecus_roxellana
ENSACAG00000009612	SF3B1	100	98.850	ENSSBOG00000020080	SF3B1	100	98.850	Saimiri_boliviensis_boliviensis
ENSACAG00000009612	SF3B1	100	98.619	ENSSHAG00000017564	SF3B1	100	98.619	Sarcophilus_harrisii
ENSACAG00000009612	SF3B1	100	94.681	ENSSFOG00015021535	sf3b1	100	94.833	Scleropages_formosus
ENSACAG00000009612	SF3B1	99	92.873	ENSSMAG00000013977	sf3b1	99	92.949	Scophthalmus_maximus
ENSACAG00000009612	SF3B1	100	93.536	ENSSDUG00000017422	sf3b1	100	93.536	Seriola_dumerili
ENSACAG00000009612	SF3B1	100	93.460	ENSSLDG00000019495	sf3b1	100	93.460	Seriola_lalandi_dorsalis
ENSACAG00000009612	SF3B1	76	99.648	ENSSARG00000007016	SF3B1	76	99.648	Sorex_araneus
ENSACAG00000009612	SF3B1	100	99.002	ENSSPUG00000000410	SF3B1	100	99.002	Sphenodon_punctatus
ENSACAG00000009612	SF3B1	100	93.688	ENSSPAG00000010451	sf3b1	99	93.688	Stegastes_partitus
ENSACAG00000009612	SF3B1	91	98.486	ENSSSCG00000016075	SF3B1	100	99.223	Sus_scrofa
ENSACAG00000009612	SF3B1	100	98.925	ENSTGUG00000010553	SF3B1	100	98.925	Taeniopygia_guttata
ENSACAG00000009612	SF3B1	100	93.536	ENSTRUG00000015534	sf3b1	100	93.536	Takifugu_rubripes
ENSACAG00000009612	SF3B1	85	99.380	ENSTBEG00000008714	SF3B1	93	99.380	Tupaia_belangeri
ENSACAG00000009612	SF3B1	92	93.932	ENSTTRG00000003414	SF3B1	92	93.932	Tursiops_truncatus
ENSACAG00000009612	SF3B1	94	93.522	ENSUAMG00000018506	SF3B1	99	98.785	Ursus_americanus
ENSACAG00000009612	SF3B1	100	98.850	ENSUMAG00000020945	SF3B1	100	98.850	Ursus_maritimus
ENSACAG00000009612	SF3B1	100	90.798	ENSVPAG00000005798	SF3B1	100	90.798	Vicugna_pacos
ENSACAG00000009612	SF3B1	100	98.850	ENSVVUG00000025948	SF3B1	95	98.850	Vulpes_vulpes
ENSACAG00000009612	SF3B1	100	96.242	ENSXETG00000013339	sf3b1	100	96.242	Xenopus_tropicalis
ENSACAG00000009612	SF3B1	100	90.130	ENSXCOG00000018086	sf3b1	100	90.015	Xiphophorus_couchianus
ENSACAG00000009612	SF3B1	100	93.617	ENSXMAG00000007369	sf3b1	100	93.764	Xiphophorus_maculatus