EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000009747 (Gene tree)
Gene ID: 100557277
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 11914 bases
Position: chr2:16440682-16452595
Accession: 100557277
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000009574	PPR	PF01535.20	3.9e-06	1	1
ENSACAP00000009574	MRP-S27	PF10037.9	3.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000009771	PTCD2-201	1516	XM_003216264	ENSACAP00000009574	391 (aa)	XP_003216312	G1KJB5

Gene Model

Click here to download ENSACAG00000009747's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000009747's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000009747	PTCD2	97	55.906	ENSG00000049883	PTCD2	100	54.187	Homo_sapiens
ENSACAG00000009747	PTCD2	91	48.451	ENSAPOG00000020682	ptcd2	93	48.451	Acanthochromis_polyacanthus
ENSACAG00000009747	PTCD2	93	56.720	ENSAMEG00000007194	PTCD2	96	56.720	Ailuropoda_melanoleuca
ENSACAG00000009747	PTCD2	88	46.418	ENSACIG00000002053	ptcd2	100	46.418	Amphilophus_citrinellus
ENSACAG00000009747	PTCD2	100	45.918	ENSAOCG00000006616	ptcd2	100	45.918	Amphiprion_ocellaris
ENSACAG00000009747	PTCD2	100	45.918	ENSAPEG00000022926	ptcd2	100	45.918	Amphiprion_percula
ENSACAG00000009747	PTCD2	97	56.072	ENSANAG00000029353	PTCD2	99	56.072	Aotus_nancymaae
ENSACAG00000009747	PTCD2	100	46.056	ENSACLG00000027742	ptcd2	100	46.056	Astatotilapia_calliptera
ENSACAG00000009747	PTCD2	92	44.475	ENSAMXG00000029404	ptcd2	95	44.475	Astyanax_mexicanus
ENSACAG00000009747	PTCD2	90	58.924	ENSBTAG00000014675	PTCD2	92	58.924	Bos_taurus
ENSACAG00000009747	PTCD2	95	56.464	ENSCJAG00000016364	PTCD2	98	56.464	Callithrix_jacchus
ENSACAG00000009747	PTCD2	99	57.069	ENSCAFG00000007982	PTCD2	91	57.069	Canis_familiaris
ENSACAG00000009747	PTCD2	88	60.116	ENSCAFG00020019147	PTCD2	97	60.116	Canis_lupus_dingo
ENSACAG00000009747	PTCD2	90	59.207	ENSCHIG00000017118	PTCD2	92	59.207	Capra_hircus
ENSACAG00000009747	PTCD2	97	54.593	ENSCPOG00000040168	PTCD2	99	54.593	Cavia_porcellus
ENSACAG00000009747	PTCD2	97	55.297	ENSCCAG00000029389	-	99	55.297	Cebus_capucinus
ENSACAG00000009747	PTCD2	82	53.918	ENSCCAG00000021996	-	98	53.918	Cebus_capucinus
ENSACAG00000009747	PTCD2	97	56.955	ENSCATG00000019069	PTCD2	99	56.955	Cercocebus_atys
ENSACAG00000009747	PTCD2	97	55.820	ENSCLAG00000000072	PTCD2	98	55.820	Chinchilla_lanigera
ENSACAG00000009747	PTCD2	97	57.480	ENSCSAG00000015623	PTCD2	99	57.480	Chlorocebus_sabaeus
ENSACAG00000009747	PTCD2	71	58.235	ENSCHOG00000010634	PTCD2	79	58.235	Choloepus_hoffmanni
ENSACAG00000009747	PTCD2	100	64.706	ENSCPBG00000000216	PTCD2	100	64.706	Chrysemys_picta_bellii
ENSACAG00000009747	PTCD2	97	57.218	ENSCANG00000035636	PTCD2	98	57.218	Colobus_angolensis_palliatus
ENSACAG00000009747	PTCD2	92	57.341	ENSCGRG00001015289	Ptcd2	79	57.341	Cricetulus_griseus_chok1gshd
ENSACAG00000009747	PTCD2	92	57.341	ENSCGRG00000006193	Ptcd2	79	57.341	Cricetulus_griseus_crigri
ENSACAG00000009747	PTCD2	89	48.415	ENSCVAG00000001285	ptcd2	89	48.415	Cyprinodon_variegatus
ENSACAG00000009747	PTCD2	92	48.343	ENSDARG00000035391	ptcd2	93	48.343	Danio_rerio
ENSACAG00000009747	PTCD2	96	56.579	ENSDNOG00000008719	PTCD2	98	56.579	Dasypus_novemcinctus
ENSACAG00000009747	PTCD2	96	57.407	ENSDORG00000004921	Ptcd2	98	57.407	Dipodomys_ordii
ENSACAG00000009747	PTCD2	94	50.269	ENSETEG00000016542	PTCD2	96	50.269	Echinops_telfairi
ENSACAG00000009747	PTCD2	93	57.258	ENSEASG00005018038	PTCD2	97	57.258	Equus_asinus_asinus
ENSACAG00000009747	PTCD2	100	56.010	ENSECAG00000007022	PTCD2	100	56.010	Equus_caballus
ENSACAG00000009747	PTCD2	92	57.493	ENSEEUG00000014031	PTCD2	94	57.493	Erinaceus_europaeus
ENSACAG00000009747	PTCD2	91	50.838	ENSELUG00000003584	ptcd2	93	50.838	Esox_lucius
ENSACAG00000009747	PTCD2	99	52.658	ENSFCAG00000045432	PTCD2	85	52.658	Felis_catus
ENSACAG00000009747	PTCD2	84	58.104	ENSFALG00000010299	PTCD2	99	58.104	Ficedula_albicollis
ENSACAG00000009747	PTCD2	94	56.836	ENSFDAG00000018461	PTCD2	97	56.836	Fukomys_damarensis
ENSACAG00000009747	PTCD2	89	53.429	ENSGMOG00000003637	ptcd2	91	53.429	Gadus_morhua
ENSACAG00000009747	PTCD2	91	56.780	ENSGALG00000038260	PTCD2	99	55.118	Gallus_gallus
ENSACAG00000009747	PTCD2	100	70.332	ENSGAGG00000021952	PTCD2	100	70.332	Gopherus_agassizii
ENSACAG00000009747	PTCD2	97	55.906	ENSGGOG00000010695	PTCD2	98	55.906	Gorilla_gorilla
ENSACAG00000009747	PTCD2	100	46.056	ENSHBUG00000009191	ptcd2	100	46.056	Haplochromis_burtoni
ENSACAG00000009747	PTCD2	91	58.939	ENSHGLG00000001234	PTCD2	93	58.939	Heterocephalus_glaber_female
ENSACAG00000009747	PTCD2	91	58.939	ENSHGLG00100015419	PTCD2	93	58.939	Heterocephalus_glaber_male
ENSACAG00000009747	PTCD2	91	50.843	ENSHCOG00000001703	ptcd2	92	50.843	Hippocampus_comes
ENSACAG00000009747	PTCD2	91	48.732	ENSIPUG00000006080	ptcd2	97	48.787	Ictalurus_punctatus
ENSACAG00000009747	PTCD2	96	57.600	ENSSTOG00000006596	PTCD2	98	57.600	Ictidomys_tridecemlineatus
ENSACAG00000009747	PTCD2	97	55.643	ENSJJAG00000024388	Ptcd2	99	55.643	Jaculus_jaculus
ENSACAG00000009747	PTCD2	89	44.602	ENSKMAG00000009329	ptcd2	91	44.602	Kryptolebias_marmoratus
ENSACAG00000009747	PTCD2	100	47.837	ENSLBEG00000024871	ptcd2	99	47.837	Labrus_bergylta
ENSACAG00000009747	PTCD2	90	58.192	ENSLOCG00000011122	ptcd2	92	58.192	Lepisosteus_oculatus
ENSACAG00000009747	PTCD2	71	61.011	ENSLAFG00000004115	PTCD2	94	59.589	Loxodonta_africana
ENSACAG00000009747	PTCD2	97	57.218	ENSMFAG00000031516	PTCD2	98	57.218	Macaca_fascicularis
ENSACAG00000009747	PTCD2	97	57.218	ENSMNEG00000007537	PTCD2	99	57.218	Macaca_nemestrina
ENSACAG00000009747	PTCD2	97	56.955	ENSMLEG00000031093	PTCD2	98	56.955	Mandrillus_leucophaeus
ENSACAG00000009747	PTCD2	92	50.278	ENSMAMG00000018529	ptcd2	94	50.278	Mastacembelus_armatus
ENSACAG00000009747	PTCD2	100	46.056	ENSMZEG00005003625	ptcd2	100	46.056	Maylandia_zebra
ENSACAG00000009747	PTCD2	89	58.790	ENSMGAG00000005033	PTCD2	99	58.790	Meleagris_gallopavo
ENSACAG00000009747	PTCD2	91	41.243	ENSMAUG00000020253	Ptcd2	92	45.198	Mesocricetus_auratus
ENSACAG00000009747	PTCD2	96	54.787	ENSMICG00000004535	PTCD2	97	54.787	Microcebus_murinus
ENSACAG00000009747	PTCD2	91	59.605	ENSMOCG00000019985	Ptcd2	93	59.605	Microtus_ochrogaster
ENSACAG00000009747	PTCD2	96	54.521	ENSMODG00000001695	PTCD2	98	54.521	Monodelphis_domestica
ENSACAG00000009747	PTCD2	89	51.297	ENSMALG00000022372	ptcd2	91	51.297	Monopterus_albus
ENSACAG00000009747	PTCD2	91	57.062	MGP_CAROLIEiJ_G0018829	Ptcd2	93	57.062	Mus_caroli
ENSACAG00000009747	PTCD2	91	57.345	ENSMUSG00000021650	Ptcd2	93	57.345	Mus_musculus
ENSACAG00000009747	PTCD2	91	57.062	MGP_PahariEiJ_G0015904	Ptcd2	93	57.062	Mus_pahari
ENSACAG00000009747	PTCD2	91	57.627	MGP_SPRETEiJ_G0019711	Ptcd2	93	57.627	Mus_spretus
ENSACAG00000009747	PTCD2	93	58.065	ENSMPUG00000014401	PTCD2	97	58.065	Mustela_putorius_furo
ENSACAG00000009747	PTCD2	90	58.689	ENSMLUG00000007374	PTCD2	91	58.708	Myotis_lucifugus
ENSACAG00000009747	PTCD2	90	57.224	ENSNGAG00000005027	Ptcd2	92	57.224	Nannospalax_galili
ENSACAG00000009747	PTCD2	84	48.485	ENSNBRG00000000092	-	100	48.485	Neolamprologus_brichardi
ENSACAG00000009747	PTCD2	89	49.568	ENSNBRG00000008174	ptcd2	91	49.568	Neolamprologus_brichardi
ENSACAG00000009747	PTCD2	97	56.693	ENSNLEG00000004516	PTCD2	98	56.693	Nomascus_leucogenys
ENSACAG00000009747	PTCD2	64	69.886	ENSMEUG00000014012	-	65	69.886	Notamacropus_eugenii
ENSACAG00000009747	PTCD2	94	55.263	ENSOPRG00000007290	PTCD2	98	55.263	Ochotona_princeps
ENSACAG00000009747	PTCD2	97	57.480	ENSODEG00000016417	PTCD2	99	57.480	Octodon_degus
ENSACAG00000009747	PTCD2	85	46.246	ENSONIG00000011269	ptcd2	96	46.246	Oreochromis_niloticus
ENSACAG00000009747	PTCD2	91	56.742	ENSOCUG00000007970	PTCD2	98	55.080	Oryctolagus_cuniculus
ENSACAG00000009747	PTCD2	92	47.765	ENSORLG00000003851	ptcd2	92	47.765	Oryzias_latipes
ENSACAG00000009747	PTCD2	92	46.927	ENSORLG00020009823	ptcd2	93	47.059	Oryzias_latipes_hni
ENSACAG00000009747	PTCD2	90	48.725	ENSORLG00015016777	ptcd2	99	48.725	Oryzias_latipes_hsok
ENSACAG00000009747	PTCD2	92	48.189	ENSOMEG00000012396	ptcd2	87	48.189	Oryzias_melastigma
ENSACAG00000009747	PTCD2	98	53.906	ENSOGAG00000008390	PTCD2	99	53.906	Otolemur_garnettii
ENSACAG00000009747	PTCD2	90	58.924	ENSOARG00000005087	PTCD2	91	58.924	Ovis_aries
ENSACAG00000009747	PTCD2	97	55.906	ENSPPAG00000028480	PTCD2	98	55.906	Pan_paniscus
ENSACAG00000009747	PTCD2	97	55.643	ENSPTRG00000016968	PTCD2	98	55.643	Pan_troglodytes
ENSACAG00000009747	PTCD2	88	60.290	ENSPANG00000006611	PTCD2	89	60.290	Papio_anubis
ENSACAG00000009747	PTCD2	98	49.091	ENSPKIG00000019896	ptcd2	100	49.091	Paramormyrops_kingsleyae
ENSACAG00000009747	PTCD2	80	68.153	ENSPSIG00000014559	PTCD2	97	68.153	Pelodiscus_sinensis
ENSACAG00000009747	PTCD2	91	58.989	ENSPEMG00000000884	Ptcd2	93	58.989	Peromyscus_maniculatus_bairdii
ENSACAG00000009747	PTCD2	92	58.726	ENSPCIG00000029047	PTCD2	94	58.726	Phascolarctos_cinereus
ENSACAG00000009747	PTCD2	89	47.262	ENSPLAG00000010456	ptcd2	90	47.262	Poecilia_latipinna
ENSACAG00000009747	PTCD2	89	48.127	ENSPREG00000021797	ptcd2	88	48.127	Poecilia_reticulata
ENSACAG00000009747	PTCD2	97	48.819	ENSPPYG00000015543	PTCD2	98	48.819	Pongo_abelii
ENSACAG00000009747	PTCD2	80	47.452	ENSPCAG00000006806	PTCD2	99	47.452	Procavia_capensis
ENSACAG00000009747	PTCD2	92	55.125	ENSPVAG00000010935	PTCD2	93	55.125	Pteropus_vampyrus
ENSACAG00000009747	PTCD2	100	45.802	ENSPNYG00000003122	ptcd2	100	45.802	Pundamilia_nyererei
ENSACAG00000009747	PTCD2	92	51.648	ENSPNAG00000021490	ptcd2	94	51.648	Pygocentrus_nattereri
ENSACAG00000009747	PTCD2	93	56.319	ENSRNOG00000028403	Ptcd2	96	56.319	Rattus_norvegicus
ENSACAG00000009747	PTCD2	93	54.570	ENSRBIG00000032929	PTCD2	96	54.570	Rhinopithecus_bieti
ENSACAG00000009747	PTCD2	93	58.602	ENSRROG00000000080	PTCD2	97	58.602	Rhinopithecus_roxellana
ENSACAG00000009747	PTCD2	95	55.937	ENSSBOG00000018911	PTCD2	99	55.937	Saimiri_boliviensis_boliviensis
ENSACAG00000009747	PTCD2	98	55.181	ENSSHAG00000003833	PTCD2	99	55.181	Sarcophilus_harrisii
ENSACAG00000009747	PTCD2	91	51.549	ENSSFOG00015015415	ptcd2	92	51.549	Scleropages_formosus
ENSACAG00000009747	PTCD2	91	46.893	ENSSMAG00000010350	ptcd2	92	46.893	Scophthalmus_maximus
ENSACAG00000009747	PTCD2	98	47.520	ENSSDUG00000008142	ptcd2	96	47.520	Seriola_dumerili
ENSACAG00000009747	PTCD2	92	49.167	ENSSLDG00000015284	ptcd2	94	49.167	Seriola_lalandi_dorsalis
ENSACAG00000009747	PTCD2	73	50.000	ENSSARG00000004983	PTCD2	91	50.000	Sorex_araneus
ENSACAG00000009747	PTCD2	98	60.417	ENSSPUG00000000176	PTCD2	96	60.417	Sphenodon_punctatus
ENSACAG00000009747	PTCD2	100	47.449	ENSSPAG00000008591	ptcd2	100	47.449	Stegastes_partitus
ENSACAG00000009747	PTCD2	97	53.866	ENSSSCG00000016975	PTCD2	83	56.657	Sus_scrofa
ENSACAG00000009747	PTCD2	88	57.391	ENSTGUG00000005705	PTCD2	99	57.391	Taeniopygia_guttata
ENSACAG00000009747	PTCD2	96	54.255	ENSTBEG00000016559	PTCD2	97	54.255	Tupaia_belangeri
ENSACAG00000009747	PTCD2	94	57.641	ENSTTRG00000011851	PTCD2	96	57.641	Tursiops_truncatus
ENSACAG00000009747	PTCD2	93	56.720	ENSUAMG00000007583	PTCD2	87	56.720	Ursus_americanus
ENSACAG00000009747	PTCD2	93	56.720	ENSUMAG00000007666	PTCD2	97	56.720	Ursus_maritimus
ENSACAG00000009747	PTCD2	91	56.780	ENSVPAG00000009597	PTCD2	91	56.780	Vicugna_pacos
ENSACAG00000009747	PTCD2	90	59.829	ENSVVUG00000007299	-	97	58.445	Vulpes_vulpes
ENSACAG00000009747	PTCD2	97	55.208	ENSXETG00000031652	PTCD2	99	55.208	Xenopus_tropicalis
ENSACAG00000009747	PTCD2	89	47.262	ENSXMAG00000005940	ptcd2	82	47.262	Xiphophorus_maculatus