EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000009819 (Gene tree)
Gene ID: 100552334
Gene Symbol: -
Alias: -
Full Name: poly(rC)-binding protein 3
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 100090 bases
Position: chr6:56688182-56788271
Accession: 100552334
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000009627	KH_1	PF00013.29	2.4e-55	1	3
ENSACAP00000009627	KH_1	PF00013.29	2.4e-55	2	3
ENSACAP00000009627	KH_1	PF00013.29	2.4e-55	3	3
ENSACAP00000009627	KH_2	PF07650.17	1.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000009824	-	6257	XM_008113007	ENSACAP00000009627	344 (aa)	XP_008111214	G1KJD1

Gene Model

Click here to download ENSACAG00000009819's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000009819's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000009819	-	72	48.571	ENSACAG00000001479	HNRNPK	58	48.571
ENSACAG00000009819	-	99	73.088	ENSACAG00000000783	PCBP2	99	73.088
ENSACAG00000009819	-	93	39.286	ENSACAG00000000477	NOVA1	61	39.286
ENSACAG00000009819	-	93	40.845	ENSACAG00000003724	NOVA2	64	40.845
ENSACAG00000009819	-	98	62.611	ENSACAG00000011701	PCBP4	76	62.611
ENSACAG00000009819	-	99	84.211	ENSACAG00000004607	-	99	84.211
ENSACAG00000009819	-	94	34.307	ENSACAG00000006199	IGF2BP1	59	34.307

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000009819	-	97	79.464	ENSAPOG00000020003	pcbp3	87	79.464	Acanthochromis_polyacanthus
ENSACAG00000009819	-	99	82.111	ENSAPOG00000016582	-	99	82.111	Acanthochromis_polyacanthus
ENSACAG00000009819	-	99	83.761	ENSAMEG00000001697	-	99	83.761	Ailuropoda_melanoleuca
ENSACAG00000009819	-	99	82.111	ENSACIG00000002739	-	99	82.111	Amphilophus_citrinellus
ENSACAG00000009819	-	95	84.098	ENSACIG00000010933	pcbp3	93	84.098	Amphilophus_citrinellus
ENSACAG00000009819	-	95	79.683	ENSAOCG00000007806	-	100	79.683	Amphiprion_ocellaris
ENSACAG00000009819	-	94	83.436	ENSAOCG00000008592	-	96	83.436	Amphiprion_ocellaris
ENSACAG00000009819	-	99	81.633	ENSAPEG00000005209	-	99	81.633	Amphiprion_percula
ENSACAG00000009819	-	95	86.322	ENSAPEG00000008011	pcbp3	93	86.322	Amphiprion_percula
ENSACAG00000009819	-	94	84.663	ENSATEG00000015787	-	98	84.663	Anabas_testudineus
ENSACAG00000009819	-	99	81.525	ENSATEG00000009833	-	99	81.525	Anabas_testudineus
ENSACAG00000009819	-	97	90.278	ENSAPLG00000008951	-	81	90.278	Anas_platyrhynchos
ENSACAG00000009819	-	99	82.254	ENSAPLG00000002975	-	99	82.254	Anas_platyrhynchos
ENSACAG00000009819	-	95	82.375	ENSANAG00000030702	-	100	82.375	Aotus_nancymaae
ENSACAG00000009819	-	99	83.284	ENSACLG00000003801	-	99	83.284	Astatotilapia_calliptera
ENSACAG00000009819	-	95	86.018	ENSACLG00000011835	pcbp3	93	86.018	Astatotilapia_calliptera
ENSACAG00000009819	-	95	80.547	ENSAMXG00000013588	-	99	80.547	Astyanax_mexicanus
ENSACAG00000009819	-	95	88.073	ENSAMXG00000003440	pcbp3	93	88.073	Astyanax_mexicanus
ENSACAG00000009819	-	97	67.978	ENSAMXG00000001760	zgc:110045	74	67.978	Astyanax_mexicanus
ENSACAG00000009819	-	92	82.812	ENSCAFG00020019472	-	83	82.812	Canis_lupus_dingo
ENSACAG00000009819	-	99	84.457	ENSCSAG00000007440	-	91	84.457	Chlorocebus_sabaeus
ENSACAG00000009819	-	96	85.801	ENSCPBG00000012151	-	99	80.886	Chrysemys_picta_bellii
ENSACAG00000009819	-	97	98.174	ENSCPBG00000000733	-	74	97.904	Chrysemys_picta_bellii
ENSACAG00000009819	-	94	80.675	ENSCSEG00000000822	pcbp3	97	80.675	Cynoglossus_semilaevis
ENSACAG00000009819	-	98	67.760	ENSCSEG00000016984	-	95	73.967	Cynoglossus_semilaevis
ENSACAG00000009819	-	95	86.585	ENSCVAG00000014482	pcbp3	93	86.585	Cyprinodon_variegatus
ENSACAG00000009819	-	99	82.799	ENSCVAG00000005262	-	99	82.799	Cyprinodon_variegatus
ENSACAG00000009819	-	98	88.131	ENSDARG00000054378	pcbp3	98	88.131	Danio_rerio
ENSACAG00000009819	-	99	73.314	ENSETEG00000015988	-	99	73.314	Echinops_telfairi
ENSACAG00000009819	-	91	65.169	ENSEBUG00000005495	pcbp3	73	65.169	Eptatretus_burgeri
ENSACAG00000009819	-	95	67.881	ENSEBUG00000016192	pcbp3	99	68.729	Eptatretus_burgeri
ENSACAG00000009819	-	97	76.991	ENSEBUG00000007485	-	92	74.380	Eptatretus_burgeri
ENSACAG00000009819	-	94	84.356	ENSELUG00000001560	-	97	78.674	Esox_lucius
ENSACAG00000009819	-	94	87.462	ENSELUG00000003521	pcbp3	93	87.462	Esox_lucius
ENSACAG00000009819	-	97	89.444	ENSFALG00000004411	-	76	89.444	Ficedula_albicollis
ENSACAG00000009819	-	99	85.588	ENSFALG00000003949	-	99	85.588	Ficedula_albicollis
ENSACAG00000009819	-	99	80.758	ENSFHEG00000006539	-	99	80.758	Fundulus_heteroclitus
ENSACAG00000009819	-	95	81.098	ENSFHEG00000016615	pcbp3	94	81.098	Fundulus_heteroclitus
ENSACAG00000009819	-	94	61.383	ENSGMOG00000008611	-	99	61.383	Gadus_morhua
ENSACAG00000009819	-	95	70.370	ENSGMOG00000011992	pcbp3	95	70.286	Gadus_morhua
ENSACAG00000009819	-	99	82.500	ENSGALG00000004394	-	99	82.500	Gallus_gallus
ENSACAG00000009819	-	99	95.044	ENSGALG00000013155	-	99	94.277	Gallus_gallus
ENSACAG00000009819	-	96	83.183	ENSGAFG00000010274	-	95	83.183	Gambusia_affinis
ENSACAG00000009819	-	96	82.175	ENSGAFG00000011430	pcbp3	95	82.175	Gambusia_affinis
ENSACAG00000009819	-	98	74.438	ENSGACG00000014955	-	98	74.438	Gasterosteus_aculeatus
ENSACAG00000009819	-	99	78.453	ENSGACG00000002266	-	99	78.453	Gasterosteus_aculeatus
ENSACAG00000009819	-	91	97.143	ENSGAGG00000000271	-	100	91.003	Gopherus_agassizii
ENSACAG00000009819	-	86	75.210	ENSGAGG00000006956	-	94	75.210	Gopherus_agassizii
ENSACAG00000009819	-	95	86.280	ENSHBUG00000010697	pcbp3	93	86.280	Haplochromis_burtoni
ENSACAG00000009819	-	99	83.284	ENSHBUG00000021782	-	99	83.284	Haplochromis_burtoni
ENSACAG00000009819	-	95	86.850	ENSHCOG00000017868	pcbp3	93	86.850	Hippocampus_comes
ENSACAG00000009819	-	98	80.357	ENSHCOG00000006067	-	98	80.357	Hippocampus_comes
ENSACAG00000009819	-	98	88.131	ENSIPUG00000006238	pcbp3	98	88.131	Ictalurus_punctatus
ENSACAG00000009819	-	95	86.322	ENSKMAG00000003046	pcbp3	93	86.322	Kryptolebias_marmoratus
ENSACAG00000009819	-	94	83.692	ENSKMAG00000018530	-	97	79.641	Kryptolebias_marmoratus
ENSACAG00000009819	-	97	80.240	ENSLBEG00000006201	pcbp3	96	80.240	Labrus_bergylta
ENSACAG00000009819	-	99	70.882	ENSLBEG00000006542	-	99	72.059	Labrus_bergylta
ENSACAG00000009819	-	97	89.636	ENSLACG00000010804	zgc:110045	75	89.636	Latimeria_chalumnae
ENSACAG00000009819	-	96	82.768	ENSLACG00000010386	pcbp3	75	82.768	Latimeria_chalumnae
ENSACAG00000009819	-	99	87.977	ENSLOCG00000009369	pcbp3	99	87.977	Lepisosteus_oculatus
ENSACAG00000009819	-	96	93.958	ENSLOCG00000005058	zgc:110045	82	94.012	Lepisosteus_oculatus
ENSACAG00000009819	-	95	80.793	ENSMAMG00000022336	pcbp3	92	80.793	Mastacembelus_armatus
ENSACAG00000009819	-	99	81.818	ENSMAMG00000011620	-	99	81.818	Mastacembelus_armatus
ENSACAG00000009819	-	96	78.788	ENSMZEG00005014882	-	99	74.515	Maylandia_zebra
ENSACAG00000009819	-	95	84.098	ENSMZEG00005008993	pcbp3	96	84.049	Maylandia_zebra
ENSACAG00000009819	-	97	89.444	ENSMGAG00000006794	-	76	89.444	Meleagris_gallopavo
ENSACAG00000009819	-	96	76.504	ENSMGAG00000001883	-	96	76.045	Meleagris_gallopavo
ENSACAG00000009819	-	94	80.428	ENSMMOG00000000730	pcbp3	86	80.428	Mola_mola
ENSACAG00000009819	-	99	80.645	ENSMMOG00000005216	-	99	80.645	Mola_mola
ENSACAG00000009819	-	69	78.972	ENSMODG00000027884	-	93	78.972	Monodelphis_domestica
ENSACAG00000009819	-	94	84.356	ENSMALG00000000691	pcbp3	93	84.356	Monopterus_albus
ENSACAG00000009819	-	99	74.444	ENSMPUG00000001779	-	91	74.444	Mustela_putorius_furo
ENSACAG00000009819	-	95	84.356	ENSNBRG00000016409	-	93	84.356	Neolamprologus_brichardi
ENSACAG00000009819	-	95	81.791	ENSNBRG00000016714	-	99	77.326	Neolamprologus_brichardi
ENSACAG00000009819	-	95	81.322	ENSOPRG00000003431	-	99	81.322	Ochotona_princeps
ENSACAG00000009819	-	99	83.284	ENSONIG00000004611	-	99	83.284	Oreochromis_niloticus
ENSACAG00000009819	-	94	82.029	ENSONIG00000012122	-	96	82.029	Oreochromis_niloticus
ENSACAG00000009819	-	99	85.000	ENSOCUG00000002696	-	91	85.000	Oryctolagus_cuniculus
ENSACAG00000009819	-	94	83.436	ENSORLG00000000059	pcbp3	98	83.436	Oryzias_latipes
ENSACAG00000009819	-	99	83.090	ENSORLG00000022739	-	99	83.090	Oryzias_latipes
ENSACAG00000009819	-	99	82.799	ENSORLG00020006124	-	99	82.799	Oryzias_latipes_hni
ENSACAG00000009819	-	97	82.388	ENSORLG00020012671	pcbp3	97	82.388	Oryzias_latipes_hni
ENSACAG00000009819	-	97	82.388	ENSORLG00015000429	pcbp3	97	82.388	Oryzias_latipes_hsok
ENSACAG00000009819	-	98	82.059	ENSORLG00015008051	-	97	82.059	Oryzias_latipes_hsok
ENSACAG00000009819	-	95	80.192	ENSOMEG00000020811	pcbp3	99	80.192	Oryzias_melastigma
ENSACAG00000009819	-	99	83.090	ENSOMEG00000020162	-	99	83.090	Oryzias_melastigma
ENSACAG00000009819	-	99	80.328	ENSOGAG00000008044	-	99	80.328	Otolemur_garnettii
ENSACAG00000009819	-	98	82.196	ENSPKIG00000019329	pcbp3	98	82.196	Paramormyrops_kingsleyae
ENSACAG00000009819	-	81	84.932	ENSPKIG00000020913	-	95	84.932	Paramormyrops_kingsleyae
ENSACAG00000009819	-	99	73.743	ENSPSIG00000014970	-	99	74.022	Pelodiscus_sinensis
ENSACAG00000009819	-	91	97.143	ENSPSIG00000008350	-	68	97.143	Pelodiscus_sinensis
ENSACAG00000009819	-	94	86.769	ENSPMGG00000022383	pcbp3	93	86.769	Periophthalmus_magnuspinnatus
ENSACAG00000009819	-	97	68.639	ENSPMAG00000004551	pcbp3	90	68.639	Petromyzon_marinus
ENSACAG00000009819	-	74	91.146	ENSPMAG00000004637	-	99	91.146	Petromyzon_marinus
ENSACAG00000009819	-	99	88.856	ENSPCIG00000028092	-	99	88.856	Phascolarctos_cinereus
ENSACAG00000009819	-	96	78.000	ENSPLAG00000011449	pcbp3	87	78.000	Poecilia_latipinna
ENSACAG00000009819	-	98	78.797	ENSPLAG00000004074	-	91	78.797	Poecilia_latipinna
ENSACAG00000009819	-	98	80.229	ENSPMEG00000006653	-	98	80.229	Poecilia_mexicana
ENSACAG00000009819	-	94	86.018	ENSPMEG00000021239	pcbp3	93	86.018	Poecilia_mexicana
ENSACAG00000009819	-	99	81.287	ENSPREG00000020585	-	99	81.287	Poecilia_reticulata
ENSACAG00000009819	-	94	78.963	ENSPREG00000015736	pcbp3	97	78.963	Poecilia_reticulata
ENSACAG00000009819	-	99	80.938	ENSPNYG00000013205	-	99	80.938	Pundamilia_nyererei
ENSACAG00000009819	-	94	80.675	ENSPNYG00000012326	pcbp3	93	80.675	Pundamilia_nyererei
ENSACAG00000009819	-	96	86.405	ENSPNAG00000008541	-	95	86.405	Pygocentrus_nattereri
ENSACAG00000009819	-	98	83.976	ENSPNAG00000015104	pcbp3	98	83.976	Pygocentrus_nattereri
ENSACAG00000009819	-	99	84.751	ENSRNOG00000001245	Pcbp3	99	84.751	Rattus_norvegicus
ENSACAG00000009819	-	99	76.204	ENSRBIG00000028177	-	99	75.269	Rhinopithecus_bieti
ENSACAG00000009819	-	99	81.868	ENSSHAG00000007890	-	99	80.833	Sarcophilus_harrisii
ENSACAG00000009819	-	100	81.977	ENSSFOG00015007118	-	98	81.977	Scleropages_formosus
ENSACAG00000009819	-	94	86.769	ENSSFOG00015010205	pcbp3	98	86.769	Scleropages_formosus
ENSACAG00000009819	-	95	87.423	ENSSFOG00015014706	pcbp3	93	87.423	Scleropages_formosus
ENSACAG00000009819	-	98	83.680	ENSSMAG00000003135	-	98	83.680	Scophthalmus_maximus
ENSACAG00000009819	-	94	80.982	ENSSMAG00000011929	pcbp3	95	80.982	Scophthalmus_maximus
ENSACAG00000009819	-	94	84.404	ENSSDUG00000011608	pcbp3	97	84.404	Seriola_dumerili
ENSACAG00000009819	-	96	81.212	ENSSDUG00000008502	-	94	81.212	Seriola_dumerili
ENSACAG00000009819	-	96	83.988	ENSSLDG00000020161	-	94	83.988	Seriola_lalandi_dorsalis
ENSACAG00000009819	-	94	84.404	ENSSLDG00000008518	pcbp3	97	84.404	Seriola_lalandi_dorsalis
ENSACAG00000009819	-	92	97.569	ENSSPUG00000013214	-	91	97.569	Sphenodon_punctatus
ENSACAG00000009819	-	95	73.089	ENSSPAG00000023341	-	93	73.089	Stegastes_partitus
ENSACAG00000009819	-	95	79.683	ENSSPAG00000004190	-	100	79.683	Stegastes_partitus
ENSACAG00000009819	-	99	90.909	ENSTGUG00000008158	-	100	90.909	Taeniopygia_guttata
ENSACAG00000009819	-	99	77.839	ENSTGUG00000003316	-	99	77.839	Taeniopygia_guttata
ENSACAG00000009819	-	95	82.637	ENSTRUG00000006280	-	92	82.637	Takifugu_rubripes
ENSACAG00000009819	-	95	83.180	ENSTRUG00000013604	pcbp3	93	83.180	Takifugu_rubripes
ENSACAG00000009819	-	99	83.056	ENSTTRG00000015075	-	99	83.056	Tursiops_truncatus
ENSACAG00000009819	-	99	80.332	ENSXETG00000011483	pcbp1	99	80.332	Xenopus_tropicalis
ENSACAG00000009819	-	91	87.870	ENSXETG00000010491	pcbp2	74	87.870	Xenopus_tropicalis
ENSACAG00000009819	-	94	86.018	ENSXCOG00000020481	pcbp3	93	86.018	Xiphophorus_couchianus
ENSACAG00000009819	-	99	81.268	ENSXMAG00000028711	-	99	82.133	Xiphophorus_maculatus
ENSACAG00000009819	-	95	86.322	ENSXMAG00000008175	pcbp3	93	86.322	Xiphophorus_maculatus