EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000010019 (Gene tree)
Gene ID: 100553944
Gene Symbol: SF3B4
Alias: Hsh49|SAP49|SF3b49
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 16424 bases
Position: chrGL344255.1:8955-25378
Accession: 100553944
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000009831	RRM_1	PF00076.22	1.9e-39	1	2
ENSACAP00000009831	RRM_1	PF00076.22	1.9e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000010031	SF3B4-201	1407	XM_003229923	ENSACAP00000009831	417 (aa)	XP_003229971	H9GFX3

Gene Model

Click here to download ENSACAG00000010019's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000010019's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000010019	SF3B4	70	41.104	ENSACAG00000016470	PABPC1	60	41.104
ENSACAG00000010019	SF3B4	71	37.158	ENSACAG00000011841	PABPC1L	57	37.158

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000010019	SF3B4	90	89.817	ENSG00000143368	SF3B4	90	100.000	Homo_sapiens
ENSACAG00000010019	SF3B4	55	98.253	ENSAPOG00000017647	sf3b4	54	100.000	Acanthochromis_polyacanthus
ENSACAG00000010019	SF3B4	90	90.078	ENSAMEG00000010073	SF3B4	62	96.198	Ailuropoda_melanoleuca
ENSACAG00000010019	SF3B4	58	80.496	ENSACIG00000018455	sf3b4	63	99.065	Amphilophus_citrinellus
ENSACAG00000010019	SF3B4	54	99.115	ENSAOCG00000019801	sf3b4	54	100.000	Amphiprion_ocellaris
ENSACAG00000010019	SF3B4	54	99.115	ENSAPEG00000010365	sf3b4	54	100.000	Amphiprion_percula
ENSACAG00000010019	SF3B4	55	98.253	ENSATEG00000012844	sf3b4	53	100.000	Anabas_testudineus
ENSACAG00000010019	SF3B4	90	89.817	ENSANAG00000031025	SF3B4	62	96.198	Aotus_nancymaae
ENSACAG00000010019	SF3B4	57	96.203	ENSACLG00000014260	sf3b4	53	100.000	Astatotilapia_calliptera
ENSACAG00000010019	SF3B4	55	98.690	ENSAMXG00000008282	sf3b4	53	100.000	Astyanax_mexicanus
ENSACAG00000010019	SF3B4	90	90.078	ENSBTAG00000012495	SF3B4	62	96.198	Bos_taurus
ENSACAG00000010019	SF3B4	84	88.235	ENSBTAG00000012793	-	53	94.931	Bos_taurus
ENSACAG00000010019	SF3B4	90	70.787	ENSCJAG00000042351	SF3B4	50	70.787	Callithrix_jacchus
ENSACAG00000010019	SF3B4	90	90.078	ENSCAFG00000011617	SF3B4	62	96.198	Canis_familiaris
ENSACAG00000010019	SF3B4	90	90.078	ENSCAFG00020019775	SF3B4	62	96.198	Canis_lupus_dingo
ENSACAG00000010019	SF3B4	90	90.078	ENSCHIG00000025663	-	62	96.198	Capra_hircus
ENSACAG00000010019	SF3B4	90	89.817	ENSTSYG00000009295	SF3B4	62	96.198	Carlito_syrichta
ENSACAG00000010019	SF3B4	90	90.078	ENSCPOG00000008267	SF3B4	62	96.198	Cavia_porcellus
ENSACAG00000010019	SF3B4	94	80.886	ENSCCAG00000021751	-	59	95.437	Cebus_capucinus
ENSACAG00000010019	SF3B4	74	81.470	ENSCCAG00000019823	-	57	87.083	Cebus_capucinus
ENSACAG00000010019	SF3B4	90	89.817	ENSCATG00000033114	SF3B4	62	96.198	Cercocebus_atys
ENSACAG00000010019	SF3B4	90	90.078	ENSCLAG00000015851	SF3B4	62	96.198	Chinchilla_lanigera
ENSACAG00000010019	SF3B4	90	89.817	ENSCSAG00000018129	SF3B4	62	96.198	Chlorocebus_sabaeus
ENSACAG00000010019	SF3B4	54	88.393	ENSCING00000002337	-	58	90.654	Ciona_intestinalis
ENSACAG00000010019	SF3B4	50	91.429	ENSCSAVG00000007809	-	89	89.881	Ciona_savignyi
ENSACAG00000010019	SF3B4	90	89.817	ENSCANG00000035579	SF3B4	62	96.198	Colobus_angolensis_palliatus
ENSACAG00000010019	SF3B4	90	89.817	ENSCGRG00001003590	Sf3b4	62	96.198	Cricetulus_griseus_chok1gshd
ENSACAG00000010019	SF3B4	90	89.817	ENSCGRG00000016914	Sf3b4	62	96.198	Cricetulus_griseus_crigri
ENSACAG00000010019	SF3B4	64	88.148	ENSCVAG00000005536	sf3b4	55	100.000	Cyprinodon_variegatus
ENSACAG00000010019	SF3B4	55	98.261	ENSDARG00000018574	sf3b4	54	100.000	Danio_rerio
ENSACAG00000010019	SF3B4	88	86.667	ENSDNOG00000048908	-	61	91.373	Dasypus_novemcinctus
ENSACAG00000010019	SF3B4	97	72.087	ENSDNOG00000037231	-	50	87.245	Dasypus_novemcinctus
ENSACAG00000010019	SF3B4	90	90.078	ENSDORG00000016366	Sf3b4	62	96.198	Dipodomys_ordii
ENSACAG00000010019	SF3B4	56	70.652	FBgn0015818	Spx	62	88.318	Drosophila_melanogaster
ENSACAG00000010019	SF3B4	75	82.500	ENSETEG00000008963	SF3B4	62	87.452	Echinops_telfairi
ENSACAG00000010019	SF3B4	90	90.078	ENSEASG00005001477	SF3B4	62	96.198	Equus_asinus_asinus
ENSACAG00000010019	SF3B4	90	90.078	ENSECAG00000024737	SF3B4	62	96.198	Equus_caballus
ENSACAG00000010019	SF3B4	55	98.690	ENSELUG00000012876	sf3b4	53	100.000	Esox_lucius
ENSACAG00000010019	SF3B4	90	90.078	ENSFCAG00000010106	SF3B4	62	96.198	Felis_catus
ENSACAG00000010019	SF3B4	90	90.078	ENSFDAG00000009286	SF3B4	62	96.198	Fukomys_damarensis
ENSACAG00000010019	SF3B4	55	97.380	ENSGMOG00000002519	sf3b4	63	99.533	Gadus_morhua
ENSACAG00000010019	SF3B4	99	95.215	ENSGALG00000013352	SF3B4	100	95.455	Gallus_gallus
ENSACAG00000010019	SF3B4	64	93.208	ENSGAFG00000010181	sf3b4	54	100.000	Gambusia_affinis
ENSACAG00000010019	SF3B4	99	67.299	ENSGGOG00000038845	-	55	88.318	Gorilla_gorilla
ENSACAG00000010019	SF3B4	90	89.817	ENSGGOG00000004761	SF3B4	62	96.198	Gorilla_gorilla
ENSACAG00000010019	SF3B4	57	96.203	ENSHBUG00000002028	sf3b4	53	100.000	Haplochromis_burtoni
ENSACAG00000010019	SF3B4	90	90.078	ENSHGLG00000012360	SF3B4	62	96.198	Heterocephalus_glaber_female
ENSACAG00000010019	SF3B4	90	85.526	ENSHGLG00100008533	SF3B4	58	96.708	Heterocephalus_glaber_male
ENSACAG00000010019	SF3B4	55	98.261	ENSIPUG00000012242	Sf3b4	54	100.000	Ictalurus_punctatus
ENSACAG00000010019	SF3B4	90	90.078	ENSSTOG00000000684	-	62	96.198	Ictidomys_tridecemlineatus
ENSACAG00000010019	SF3B4	75	69.737	ENSJJAG00000022500	Sf3b4	69	74.118	Jaculus_jaculus
ENSACAG00000010019	SF3B4	57	96.624	ENSKMAG00000008154	sf3b4	54	100.000	Kryptolebias_marmoratus
ENSACAG00000010019	SF3B4	56	97.854	ENSLBEG00000026818	sf3b4	54	100.000	Labrus_bergylta
ENSACAG00000010019	SF3B4	58	97.119	ENSLACG00000004436	SF3B4	67	97.119	Latimeria_chalumnae
ENSACAG00000010019	SF3B4	58	97.531	ENSLOCG00000009048	sf3b4	58	97.531	Lepisosteus_oculatus
ENSACAG00000010019	SF3B4	90	91.146	ENSLAFG00000008531	SF3B4	62	96.198	Loxodonta_africana
ENSACAG00000010019	SF3B4	90	89.817	ENSMFAG00000042395	SF3B4	62	96.198	Macaca_fascicularis
ENSACAG00000010019	SF3B4	91	67.192	ENSMFAG00000039067	-	53	80.000	Macaca_fascicularis
ENSACAG00000010019	SF3B4	90	89.817	ENSMMUG00000007256	SF3B4	62	96.198	Macaca_mulatta
ENSACAG00000010019	SF3B4	91	66.667	ENSMNEG00000031526	-	53	79.500	Macaca_nemestrina
ENSACAG00000010019	SF3B4	90	89.817	ENSMNEG00000031839	SF3B4	62	96.198	Macaca_nemestrina
ENSACAG00000010019	SF3B4	90	89.817	ENSMLEG00000038667	SF3B4	62	96.198	Mandrillus_leucophaeus
ENSACAG00000010019	SF3B4	57	96.624	ENSMAMG00000014692	sf3b4	54	100.000	Mastacembelus_armatus
ENSACAG00000010019	SF3B4	57	96.203	ENSMZEG00005026741	sf3b4	53	100.000	Maylandia_zebra
ENSACAG00000010019	SF3B4	99	91.607	ENSMGAG00000000653	SF3B4	100	91.127	Meleagris_gallopavo
ENSACAG00000010019	SF3B4	90	89.817	ENSMAUG00000015266	Sf3b4	62	96.198	Mesocricetus_auratus
ENSACAG00000010019	SF3B4	90	90.078	ENSMICG00000044961	SF3B4	62	96.198	Microcebus_murinus
ENSACAG00000010019	SF3B4	92	81.654	ENSMOCG00000014155	-	63	93.701	Microtus_ochrogaster
ENSACAG00000010019	SF3B4	90	89.817	ENSMOCG00000013658	-	62	96.198	Microtus_ochrogaster
ENSACAG00000010019	SF3B4	55	99.127	ENSMMOG00000018032	sf3b4	55	100.000	Mola_mola
ENSACAG00000010019	SF3B4	90	90.339	ENSMODG00000018767	SF3B4	62	96.198	Monodelphis_domestica
ENSACAG00000010019	SF3B4	54	98.673	ENSMALG00000006174	sf3b4	53	100.000	Monopterus_albus
ENSACAG00000010019	SF3B4	90	89.556	MGP_CAROLIEiJ_G0025365	Sf3b4	57	96.708	Mus_caroli
ENSACAG00000010019	SF3B4	90	89.817	ENSMUSG00000068856	Sf3b4	62	96.198	Mus_musculus
ENSACAG00000010019	SF3B4	90	89.817	MGP_PahariEiJ_G0026809	Sf3b4	62	96.198	Mus_pahari
ENSACAG00000010019	SF3B4	90	89.817	MGP_SPRETEiJ_G0026309	Sf3b4	62	96.198	Mus_spretus
ENSACAG00000010019	SF3B4	90	90.078	ENSMPUG00000005563	SF3B4	62	96.198	Mustela_putorius_furo
ENSACAG00000010019	SF3B4	90	90.078	ENSMLUG00000010789	SF3B4	62	96.198	Myotis_lucifugus
ENSACAG00000010019	SF3B4	90	91.123	ENSNGAG00000016337	Sf3b4	62	96.198	Nannospalax_galili
ENSACAG00000010019	SF3B4	57	96.624	ENSNBRG00000013865	sf3b4	53	100.000	Neolamprologus_brichardi
ENSACAG00000010019	SF3B4	99	69.431	ENSNLEG00000000537	-	54	90.187	Nomascus_leucogenys
ENSACAG00000010019	SF3B4	81	100.000	ENSMEUG00000003272	SF3B4	82	100.000	Notamacropus_eugenii
ENSACAG00000010019	SF3B4	55	93.860	ENSOPRG00000010808	SF3B4	50	95.327	Ochotona_princeps
ENSACAG00000010019	SF3B4	74	79.747	ENSODEG00000003597	-	65	81.439	Octodon_degus
ENSACAG00000010019	SF3B4	88	65.416	ENSODEG00000008916	-	55	76.415	Octodon_degus
ENSACAG00000010019	SF3B4	57	96.203	ENSONIG00000002730	sf3b4	53	100.000	Oreochromis_niloticus
ENSACAG00000010019	SF3B4	95	56.738	ENSOANG00000004768	-	50	81.944	Ornithorhynchus_anatinus
ENSACAG00000010019	SF3B4	90	90.078	ENSOCUG00000004614	SF3B4	62	96.198	Oryctolagus_cuniculus
ENSACAG00000010019	SF3B4	56	98.276	ENSORLG00000003062	sf3b4	55	100.000	Oryzias_latipes
ENSACAG00000010019	SF3B4	56	98.276	ENSORLG00020000687	sf3b4	54	100.000	Oryzias_latipes_hni
ENSACAG00000010019	SF3B4	56	98.276	ENSORLG00015010989	sf3b4	54	100.000	Oryzias_latipes_hsok
ENSACAG00000010019	SF3B4	56	98.276	ENSOMEG00000013694	sf3b4	54	100.000	Oryzias_melastigma
ENSACAG00000010019	SF3B4	90	90.078	ENSOGAG00000006265	SF3B4	62	96.198	Otolemur_garnettii
ENSACAG00000010019	SF3B4	90	90.078	ENSOARG00000020718	-	62	96.198	Ovis_aries
ENSACAG00000010019	SF3B4	86	69.022	ENSOARG00000007368	-	51	83.333	Ovis_aries
ENSACAG00000010019	SF3B4	99	73.460	ENSPPAG00000030024	-	58	86.611	Pan_paniscus
ENSACAG00000010019	SF3B4	90	89.817	ENSPPAG00000040904	SF3B4	62	96.198	Pan_paniscus
ENSACAG00000010019	SF3B4	90	90.078	ENSPPRG00000007384	SF3B4	62	96.198	Panthera_pardus
ENSACAG00000010019	SF3B4	90	90.078	ENSPTIG00000014530	SF3B4	62	96.198	Panthera_tigris_altaica
ENSACAG00000010019	SF3B4	99	72.488	ENSPTRG00000049727	-	60	87.029	Pan_troglodytes
ENSACAG00000010019	SF3B4	90	89.817	ENSPTRG00000001243	SF3B4	62	96.198	Pan_troglodytes
ENSACAG00000010019	SF3B4	90	89.817	ENSPANG00000005126	SF3B4	62	96.198	Papio_anubis
ENSACAG00000010019	SF3B4	56	97.845	ENSPKIG00000020669	sf3b4	57	100.000	Paramormyrops_kingsleyae
ENSACAG00000010019	SF3B4	66	79.197	ENSPSIG00000009565	SF3B4	63	100.000	Pelodiscus_sinensis
ENSACAG00000010019	SF3B4	90	89.817	ENSPEMG00000017568	Sf3b4	62	96.198	Peromyscus_maniculatus_bairdii
ENSACAG00000010019	SF3B4	90	71.649	ENSPMAG00000007842	-	50	95.327	Petromyzon_marinus
ENSACAG00000010019	SF3B4	90	90.339	ENSPCIG00000008765	SF3B4	62	96.198	Phascolarctos_cinereus
ENSACAG00000010019	SF3B4	65	91.481	ENSPFOG00000005754	sf3b4	54	100.000	Poecilia_formosa
ENSACAG00000010019	SF3B4	65	91.481	ENSPLAG00000001401	sf3b4	59	100.000	Poecilia_latipinna
ENSACAG00000010019	SF3B4	65	91.852	ENSPREG00000011076	sf3b4	53	100.000	Poecilia_reticulata
ENSACAG00000010019	SF3B4	50	96.635	ENSPCAG00000000392	SF3B4	50	96.635	Procavia_capensis
ENSACAG00000010019	SF3B4	90	90.078	ENSPCOG00000015399	SF3B4	62	96.198	Propithecus_coquereli
ENSACAG00000010019	SF3B4	90	90.078	ENSPVAG00000014171	SF3B4	62	96.198	Pteropus_vampyrus
ENSACAG00000010019	SF3B4	57	96.203	ENSPNYG00000012700	sf3b4	53	100.000	Pundamilia_nyererei
ENSACAG00000010019	SF3B4	55	98.253	ENSPNAG00000000686	sf3b4	55	100.000	Pygocentrus_nattereri
ENSACAG00000010019	SF3B4	90	89.817	ENSRNOG00000021181	Sf3b4	62	96.198	Rattus_norvegicus
ENSACAG00000010019	SF3B4	90	89.817	ENSRBIG00000043392	SF3B4	62	96.198	Rhinopithecus_bieti
ENSACAG00000010019	SF3B4	90	89.817	ENSRROG00000029366	SF3B4	62	96.198	Rhinopithecus_roxellana
ENSACAG00000010019	SF3B4	92	64.524	ENSRROG00000028213	-	52	75.243	Rhinopithecus_roxellana
ENSACAG00000010019	SF3B4	90	89.556	ENSSBOG00000012310	-	62	95.817	Saimiri_boliviensis_boliviensis
ENSACAG00000010019	SF3B4	90	87.467	ENSSHAG00000004043	SF3B4	61	92.015	Sarcophilus_harrisii
ENSACAG00000010019	SF3B4	57	97.468	ENSSFOG00015008864	sf3b4	53	100.000	Scleropages_formosus
ENSACAG00000010019	SF3B4	54	99.115	ENSSMAG00000006837	sf3b4	54	100.000	Scophthalmus_maximus
ENSACAG00000010019	SF3B4	55	98.696	ENSSDUG00000012064	sf3b4	53	100.000	Seriola_dumerili
ENSACAG00000010019	SF3B4	55	98.261	ENSSLDG00000014226	sf3b4	53	100.000	Seriola_lalandi_dorsalis
ENSACAG00000010019	SF3B4	100	83.568	ENSSPUG00000001028	SF3B4	54	100.000	Sphenodon_punctatus
ENSACAG00000010019	SF3B4	55	98.261	ENSSPAG00000019219	sf3b4	53	100.000	Stegastes_partitus
ENSACAG00000010019	SF3B4	90	91.384	ENSSSCG00000006665	-	62	96.198	Sus_scrofa
ENSACAG00000010019	SF3B4	85	57.542	ENSSSCG00000039440	-	51	64.953	Sus_scrofa
ENSACAG00000010019	SF3B4	60	95.669	ENSTGUG00000004470	SF3B4	100	95.669	Taeniopygia_guttata
ENSACAG00000010019	SF3B4	54	97.788	ENSTRUG00000004516	sf3b4	54	100.000	Takifugu_rubripes
ENSACAG00000010019	SF3B4	55	97.817	ENSTNIG00000009156	sf3b4	55	100.000	Tetraodon_nigroviridis
ENSACAG00000010019	SF3B4	90	90.078	ENSTTRG00000005217	SF3B4	62	96.198	Tursiops_truncatus
ENSACAG00000010019	SF3B4	90	90.078	ENSUAMG00000022468	SF3B4	62	96.198	Ursus_americanus
ENSACAG00000010019	SF3B4	93	89.594	ENSUMAG00000003802	SF3B4	62	96.198	Ursus_maritimus
ENSACAG00000010019	SF3B4	88	89.757	ENSVPAG00000008152	SF3B4	61	96.016	Vicugna_pacos
ENSACAG00000010019	SF3B4	62	93.023	ENSVVUG00000022697	-	54	93.023	Vulpes_vulpes
ENSACAG00000010019	SF3B4	74	90.794	ENSVVUG00000007732	-	67	96.198	Vulpes_vulpes
ENSACAG00000010019	SF3B4	56	91.880	ENSXETG00000011038	sf3b4	54	100.000	Xenopus_tropicalis
ENSACAG00000010019	SF3B4	55	97.826	ENSXCOG00000019895	sf3b4	55	100.000	Xiphophorus_couchianus
ENSACAG00000010019	SF3B4	55	97.826	ENSXMAG00000003772	sf3b4	55	100.000	Xiphophorus_maculatus