EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000010631 (Gene tree)
Gene ID: 107982266
Gene Symbol: -
Alias: -
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 7852 bases
Position: chrAAWZ02039108:1603-9454
Accession: 100564559
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000010481	SRP54	PF00448.22	1e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000010697	-	2105	XM_003230631	ENSACAP00000010481	433 (aa)	XP_003230679	H9GGN6

Gene Model

Click here to download ENSACAG00000010631's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000010631's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000010631	-	100	96.774	ENSACAG00000002103	-	86	96.774
ENSACAG00000010631	-	76	82.779	ENSACAG00000001124	-	100	82.779

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000010631	-	100	95.622	ENSG00000100883	SRP54	99	95.622	Homo_sapiens
ENSACAG00000010631	-	100	92.166	ENSAPOG00000011314	srp54	86	92.166	Acanthochromis_polyacanthus
ENSACAG00000010631	-	100	95.622	ENSAMEG00000015544	SRP54	86	95.622	Ailuropoda_melanoleuca
ENSACAG00000010631	-	87	89.710	ENSACIG00000022831	srp54	82	89.710	Amphilophus_citrinellus
ENSACAG00000010631	-	100	92.166	ENSAOCG00000019401	srp54	86	92.166	Amphiprion_ocellaris
ENSACAG00000010631	-	100	92.166	ENSAPEG00000001977	srp54	92	92.166	Amphiprion_percula
ENSACAG00000010631	-	100	92.627	ENSATEG00000013877	srp54	86	92.627	Anabas_testudineus
ENSACAG00000010631	-	93	95.792	ENSAPLG00000010125	SRP54	81	95.792	Anas_platyrhynchos
ENSACAG00000010631	-	100	95.622	ENSANAG00000022133	SRP54	86	95.622	Aotus_nancymaae
ENSACAG00000010631	-	100	92.396	ENSACLG00000015866	srp54	86	92.396	Astatotilapia_calliptera
ENSACAG00000010631	-	100	92.627	ENSAMXG00000032669	SRP54	86	92.627	Astyanax_mexicanus
ENSACAG00000010631	-	100	95.622	ENSBTAG00000019085	SRP54	86	95.622	Bos_taurus
ENSACAG00000010631	-	98	71.663	WBGene00009012	F21D5.7	86	71.663	Caenorhabditis_elegans
ENSACAG00000010631	-	100	95.622	ENSCJAG00000006581	SRP54	95	95.622	Callithrix_jacchus
ENSACAG00000010631	-	100	95.622	ENSCAFG00000013331	SRP54	86	95.622	Canis_familiaris
ENSACAG00000010631	-	100	95.622	ENSCAFG00020023427	SRP54	86	95.622	Canis_lupus_dingo
ENSACAG00000010631	-	100	95.622	ENSCHIG00000026345	SRP54	86	95.622	Capra_hircus
ENSACAG00000010631	-	93	85.323	ENSTSYG00000035333	-	79	85.323	Carlito_syrichta
ENSACAG00000010631	-	100	95.392	ENSTSYG00000002680	-	95	95.392	Carlito_syrichta
ENSACAG00000010631	-	90	60.494	ENSCAPG00000008780	SRP54	85	60.494	Cavia_aperea
ENSACAG00000010631	-	100	95.612	ENSCPOG00000003691	SRP54	86	95.612	Cavia_porcellus
ENSACAG00000010631	-	99	96.737	ENSCCAG00000024179	SRP54	100	98.568	Cebus_capucinus
ENSACAG00000010631	-	100	95.622	ENSCATG00000034083	SRP54	95	95.622	Cercocebus_atys
ENSACAG00000010631	-	100	95.622	ENSCLAG00000015076	SRP54	86	95.622	Chinchilla_lanigera
ENSACAG00000010631	-	100	95.622	ENSCSAG00000015575	SRP54	86	95.622	Chlorocebus_sabaeus
ENSACAG00000010631	-	95	81.265	ENSCHOG00000008986	SRP54	85	81.265	Choloepus_hoffmanni
ENSACAG00000010631	-	100	96.544	ENSCPBG00000026195	SRP54	86	96.544	Chrysemys_picta_bellii
ENSACAG00000010631	-	97	80.569	ENSCING00000007380	-	84	80.569	Ciona_intestinalis
ENSACAG00000010631	-	100	95.622	ENSCANG00000028532	SRP54	95	95.622	Colobus_angolensis_palliatus
ENSACAG00000010631	-	100	95.161	ENSCGRG00001009525	-	86	95.161	Cricetulus_griseus_chok1gshd
ENSACAG00000010631	-	73	93.968	ENSCGRG00000009453	-	72	93.968	Cricetulus_griseus_crigri
ENSACAG00000010631	-	100	91.244	ENSCSEG00000012392	srp54	86	91.244	Cynoglossus_semilaevis
ENSACAG00000010631	-	100	92.166	ENSCVAG00000010395	srp54	86	92.166	Cyprinodon_variegatus
ENSACAG00000010631	-	100	92.627	ENSDARG00000098367	srp54	86	92.627	Danio_rerio
ENSACAG00000010631	-	100	95.622	ENSDNOG00000032525	SRP54	86	95.622	Dasypus_novemcinctus
ENSACAG00000010631	-	77	86.905	ENSDORG00000005159	-	74	86.905	Dipodomys_ordii
ENSACAG00000010631	-	96	74.396	FBgn0010747	Srp54k	84	74.005	Drosophila_melanogaster
ENSACAG00000010631	-	97	57.177	ENSETEG00000012102	-	99	57.177	Echinops_telfairi
ENSACAG00000010631	-	100	95.161	ENSETEG00000016307	-	86	95.161	Echinops_telfairi
ENSACAG00000010631	-	100	84.562	ENSEBUG00000009437	-	86	84.562	Eptatretus_burgeri
ENSACAG00000010631	-	100	95.622	ENSEASG00005002057	SRP54	86	95.622	Equus_asinus_asinus
ENSACAG00000010631	-	99	95.327	ENSECAG00000018042	SRP54	84	95.327	Equus_caballus
ENSACAG00000010631	-	100	83.410	ENSEEUG00000001511	SRP54	86	83.410	Erinaceus_europaeus
ENSACAG00000010631	-	100	91.705	ENSELUG00000003395	srp54	86	91.705	Esox_lucius
ENSACAG00000010631	-	100	95.392	ENSFCAG00000032033	SRP54	86	95.392	Felis_catus
ENSACAG00000010631	-	100	96.083	ENSFALG00000005995	SRP54	86	96.083	Ficedula_albicollis
ENSACAG00000010631	-	100	95.622	ENSFDAG00000016767	SRP54	86	95.622	Fukomys_damarensis
ENSACAG00000010631	-	100	91.935	ENSFHEG00000004263	srp54	86	91.935	Fundulus_heteroclitus
ENSACAG00000010631	-	100	86.406	ENSGMOG00000011391	srp54	91	86.406	Gadus_morhua
ENSACAG00000010631	-	100	96.083	ENSGALG00000023135	SRP54	86	96.083	Gallus_gallus
ENSACAG00000010631	-	100	92.396	ENSGAFG00000011586	srp54	86	92.396	Gambusia_affinis
ENSACAG00000010631	-	100	91.935	ENSGACG00000004181	srp54	86	91.935	Gasterosteus_aculeatus
ENSACAG00000010631	-	100	96.544	ENSGAGG00000014766	SRP54	86	96.544	Gopherus_agassizii
ENSACAG00000010631	-	100	95.622	ENSGGOG00000002926	SRP54	95	95.622	Gorilla_gorilla
ENSACAG00000010631	-	100	92.396	ENSHBUG00000005678	srp54	86	92.396	Haplochromis_burtoni
ENSACAG00000010631	-	100	95.622	ENSHGLG00000002850	SRP54	86	95.622	Heterocephalus_glaber_female
ENSACAG00000010631	-	100	66.207	ENSHGLG00100007281	-	87	66.207	Heterocephalus_glaber_male
ENSACAG00000010631	-	100	95.622	ENSHGLG00100005263	SRP54	86	95.622	Heterocephalus_glaber_male
ENSACAG00000010631	-	100	90.783	ENSHCOG00000021127	srp54	86	90.783	Hippocampus_comes
ENSACAG00000010631	-	100	92.166	ENSIPUG00000001420	srp54	86	92.166	Ictalurus_punctatus
ENSACAG00000010631	-	100	95.622	ENSSTOG00000016023	SRP54	86	95.622	Ictidomys_tridecemlineatus
ENSACAG00000010631	-	100	73.272	ENSJJAG00000016404	-	98	73.272	Jaculus_jaculus
ENSACAG00000010631	-	100	89.631	ENSJJAG00000013417	-	85	89.631	Jaculus_jaculus
ENSACAG00000010631	-	100	91.935	ENSKMAG00000007707	srp54	86	91.935	Kryptolebias_marmoratus
ENSACAG00000010631	-	100	92.166	ENSLBEG00000021122	srp54	86	92.166	Labrus_bergylta
ENSACAG00000010631	-	100	92.166	ENSLBEG00000018690	srp54	86	92.166	Labrus_bergylta
ENSACAG00000010631	-	100	92.166	ENSLACG00000017890	SRP54	86	92.166	Latimeria_chalumnae
ENSACAG00000010631	-	100	93.318	ENSLOCG00000009440	srp54	86	93.318	Lepisosteus_oculatus
ENSACAG00000010631	-	100	95.622	ENSLAFG00000012007	SRP54	86	95.622	Loxodonta_africana
ENSACAG00000010631	-	100	95.622	ENSMFAG00000044371	SRP54	95	95.622	Macaca_fascicularis
ENSACAG00000010631	-	100	95.622	ENSMMUG00000015073	FAM177A1	95	95.622	Macaca_mulatta
ENSACAG00000010631	-	100	95.622	ENSMNEG00000006947	SRP54	95	95.622	Macaca_nemestrina
ENSACAG00000010631	-	100	95.622	ENSMLEG00000042251	SRP54	95	95.622	Mandrillus_leucophaeus
ENSACAG00000010631	-	100	92.396	ENSMAMG00000004803	srp54	86	92.396	Mastacembelus_armatus
ENSACAG00000010631	-	100	92.396	ENSMZEG00005027528	srp54	86	92.396	Maylandia_zebra
ENSACAG00000010631	-	97	98.575	ENSMGAG00000012481	SRP54	83	98.575	Meleagris_gallopavo
ENSACAG00000010631	-	100	95.392	ENSMAUG00000014447	-	86	95.392	Mesocricetus_auratus
ENSACAG00000010631	-	100	95.622	ENSMICG00000010270	SRP54	86	95.622	Microcebus_murinus
ENSACAG00000010631	-	100	95.392	ENSMOCG00000000948	-	99	95.392	Microtus_ochrogaster
ENSACAG00000010631	-	88	88.021	ENSMMOG00000020303	srp54	83	88.021	Mola_mola
ENSACAG00000010631	-	100	95.392	ENSMODG00000012925	-	86	95.392	Monodelphis_domestica
ENSACAG00000010631	-	100	95.392	ENSMODG00000023150	-	86	95.392	Monodelphis_domestica
ENSACAG00000010631	-	86	90.885	ENSMALG00000009163	srp54	83	90.885	Monopterus_albus
ENSACAG00000010631	-	100	95.392	MGP_CAROLIEiJ_G0017754	-	86	95.392	Mus_caroli
ENSACAG00000010631	-	100	95.392	ENSMUSG00000073079	Srp54a	86	95.392	Mus_musculus
ENSACAG00000010631	-	100	95.392	ENSMUSG00000112449	Srp54b	86	95.392	Mus_musculus
ENSACAG00000010631	-	100	94.470	ENSMUSG00000079108	Srp54c	86	94.470	Mus_musculus
ENSACAG00000010631	-	100	95.392	MGP_PahariEiJ_G0029510	-	86	95.392	Mus_pahari
ENSACAG00000010631	-	100	95.622	ENSMPUG00000016302	SRP54	86	95.622	Mustela_putorius_furo
ENSACAG00000010631	-	100	94.931	ENSMLUG00000008958	SRP54	86	94.931	Myotis_lucifugus
ENSACAG00000010631	-	100	83.871	ENSNGAG00000019806	-	85	83.871	Nannospalax_galili
ENSACAG00000010631	-	100	92.396	ENSNBRG00000006000	srp54	99	92.396	Neolamprologus_brichardi
ENSACAG00000010631	-	100	95.622	ENSNLEG00000003496	SRP54	95	95.622	Nomascus_leucogenys
ENSACAG00000010631	-	65	99.643	ENSMEUG00000000138	-	63	99.643	Notamacropus_eugenii
ENSACAG00000010631	-	100	95.622	ENSODEG00000004865	SRP54	86	95.622	Octodon_degus
ENSACAG00000010631	-	100	92.396	ENSONIG00000011768	srp54	86	92.396	Oreochromis_niloticus
ENSACAG00000010631	-	100	95.622	ENSOANG00000014051	SRP54	86	95.622	Ornithorhynchus_anatinus
ENSACAG00000010631	-	100	94.931	ENSOCUG00000007838	SRP54	86	94.931	Oryctolagus_cuniculus
ENSACAG00000010631	-	100	92.396	ENSORLG00000010027	srp54	86	92.396	Oryzias_latipes
ENSACAG00000010631	-	100	92.396	ENSORLG00020001878	srp54	86	92.396	Oryzias_latipes_hni
ENSACAG00000010631	-	100	92.396	ENSORLG00015021866	srp54	86	92.396	Oryzias_latipes_hsok
ENSACAG00000010631	-	100	92.166	ENSOMEG00000020952	srp54	86	92.166	Oryzias_melastigma
ENSACAG00000010631	-	100	95.622	ENSOGAG00000012188	SRP54	86	95.622	Otolemur_garnettii
ENSACAG00000010631	-	100	95.622	ENSOARG00000007160	SRP54	86	95.622	Ovis_aries
ENSACAG00000010631	-	100	95.622	ENSPPAG00000017434	SRP54	95	95.622	Pan_paniscus
ENSACAG00000010631	-	100	94.240	ENSPPRG00000014047	SRP54	95	94.240	Panthera_pardus
ENSACAG00000010631	-	100	95.392	ENSPTIG00000000744	SRP54	83	95.392	Panthera_tigris_altaica
ENSACAG00000010631	-	100	95.622	ENSPTRG00000006259	FAM177A1	95	95.622	Pan_troglodytes
ENSACAG00000010631	-	100	95.622	ENSPANG00000023853	SRP54	95	95.622	Papio_anubis
ENSACAG00000010631	-	100	92.396	ENSPKIG00000001953	srp54	86	92.396	Paramormyrops_kingsleyae
ENSACAG00000010631	-	100	96.313	ENSPSIG00000006476	SRP54	86	96.313	Pelodiscus_sinensis
ENSACAG00000010631	-	90	87.692	ENSPMGG00000004127	srp54	85	87.692	Periophthalmus_magnuspinnatus
ENSACAG00000010631	-	100	81.567	ENSPEMG00000019634	-	85	81.567	Peromyscus_maniculatus_bairdii
ENSACAG00000010631	-	100	85.714	ENSPMAG00000006078	-	86	85.714	Petromyzon_marinus
ENSACAG00000010631	-	100	95.392	ENSPCIG00000016175	SRP54	86	95.392	Phascolarctos_cinereus
ENSACAG00000010631	-	100	92.396	ENSPFOG00000008870	srp54	86	92.396	Poecilia_formosa
ENSACAG00000010631	-	100	92.396	ENSPLAG00000009889	srp54	86	92.396	Poecilia_latipinna
ENSACAG00000010631	-	100	92.396	ENSPMEG00000008601	srp54	86	92.396	Poecilia_mexicana
ENSACAG00000010631	-	100	92.396	ENSPREG00000004505	srp54	86	92.396	Poecilia_reticulata
ENSACAG00000010631	-	99	97.190	ENSPPYG00000005739	SRP54	85	97.190	Pongo_abelii
ENSACAG00000010631	-	100	91.014	ENSPCAG00000006268	SRP54	86	91.014	Procavia_capensis
ENSACAG00000010631	-	100	93.333	ENSPCOG00000022473	SRP54	86	93.333	Propithecus_coquereli
ENSACAG00000010631	-	52	99.552	ENSPVAG00000010056	SRP54	58	99.552	Pteropus_vampyrus
ENSACAG00000010631	-	100	92.396	ENSPNYG00000009717	srp54	86	92.396	Pundamilia_nyererei
ENSACAG00000010631	-	100	92.857	ENSPNAG00000008544	srp54	86	92.857	Pygocentrus_nattereri
ENSACAG00000010631	-	100	95.161	ENSRNOG00000032776	Srp54a	86	95.161	Rattus_norvegicus
ENSACAG00000010631	-	100	95.622	ENSRROG00000041292	SRP54	95	95.622	Rhinopithecus_roxellana
ENSACAG00000010631	-	79	56.433	YPR088C	SRP54	77	50.118	Saccharomyces_cerevisiae
ENSACAG00000010631	-	100	95.622	ENSSBOG00000035145	SRP54	92	95.622	Saimiri_boliviensis_boliviensis
ENSACAG00000010631	-	79	99.125	ENSSHAG00000000671	SRP54	100	99.125	Sarcophilus_harrisii
ENSACAG00000010631	-	100	93.088	ENSSFOG00015013920	srp54	86	93.088	Scleropages_formosus
ENSACAG00000010631	-	100	85.991	ENSSMAG00000002441	srp54	87	85.991	Scophthalmus_maximus
ENSACAG00000010631	-	100	91.935	ENSSDUG00000018586	srp54	86	91.935	Seriola_dumerili
ENSACAG00000010631	-	100	91.705	ENSSLDG00000010476	srp54	86	91.705	Seriola_lalandi_dorsalis
ENSACAG00000010631	-	100	95.622	ENSSARG00000002744	SRP54	86	95.622	Sorex_araneus
ENSACAG00000010631	-	100	96.544	ENSSPUG00000013101	SRP54	86	96.544	Sphenodon_punctatus
ENSACAG00000010631	-	100	92.166	ENSSPAG00000002354	srp54	86	92.166	Stegastes_partitus
ENSACAG00000010631	-	100	95.622	ENSSSCG00000001955	SRP54	86	95.622	Sus_scrofa
ENSACAG00000010631	-	93	95.792	ENSTGUG00000011945	-	81	95.792	Taeniopygia_guttata
ENSACAG00000010631	-	100	91.475	ENSTRUG00000007057	srp54	86	91.475	Takifugu_rubripes
ENSACAG00000010631	-	100	91.014	ENSTNIG00000002589	srp54	86	91.014	Tetraodon_nigroviridis
ENSACAG00000010631	-	100	87.327	ENSTBEG00000011409	SRP54	97	87.327	Tupaia_belangeri
ENSACAG00000010631	-	100	83.871	ENSTTRG00000000928	SRP54	86	83.871	Tursiops_truncatus
ENSACAG00000010631	-	100	95.622	ENSUMAG00000011234	SRP54	86	95.622	Ursus_maritimus
ENSACAG00000010631	-	93	95.050	ENSVPAG00000005668	SRP54	85	95.050	Vicugna_pacos
ENSACAG00000010631	-	100	95.622	ENSVVUG00000019962	SRP54	86	95.622	Vulpes_vulpes
ENSACAG00000010631	-	100	76.201	ENSXETG00000012290	srp54	86	76.244	Xenopus_tropicalis
ENSACAG00000010631	-	86	91.153	ENSXCOG00000004658	srp54	81	91.153	Xiphophorus_couchianus
ENSACAG00000010631	-	100	92.396	ENSXMAG00000018315	srp54	86	92.396	Xiphophorus_maculatus