EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000011065 (Gene tree)
Gene ID: 100552980
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 130969 bases
Position: chr3:174415754-174546722
Accession: 100552980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000010876	CMS1	PF14617.6	3.2e-32	1	1
ENSACAP00000010876	DEAD	PF00270.29	6.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000011102	CMSS1-201	841	XM_003219210	ENSACAP00000010876	273 (aa)	XP_003219258	G1KKU5

Gene Model

Click here to download ENSACAG00000011065's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000011065's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000011065	CMSS1	98	63.060	ENSG00000184220	CMSS1	99	72.840	Homo_sapiens
ENSACAG00000011065	CMSS1	74	63.861	ENSAPOG00000010604	cmss1	100	54.264	Acanthochromis_polyacanthus
ENSACAG00000011065	CMSS1	97	63.019	ENSAMEG00000004092	CMSS1	99	63.019	Ailuropoda_melanoleuca
ENSACAG00000011065	CMSS1	74	55.941	ENSACIG00000021854	cmss1	94	51.779	Amphilophus_citrinellus
ENSACAG00000011065	CMSS1	74	62.376	ENSAOCG00000013361	cmss1	96	53.763	Amphiprion_ocellaris
ENSACAG00000011065	CMSS1	74	62.376	ENSAPEG00000005829	cmss1	96	53.214	Amphiprion_percula
ENSACAG00000011065	CMSS1	75	64.563	ENSATEG00000008209	cmss1	98	54.737	Anabas_testudineus
ENSACAG00000011065	CMSS1	85	74.678	ENSAPLG00000010542	CMSS1	100	74.678	Anas_platyrhynchos
ENSACAG00000011065	CMSS1	98	61.567	ENSANAG00000023565	CMSS1	99	61.567	Aotus_nancymaae
ENSACAG00000011065	CMSS1	74	64.356	ENSACLG00000027294	cmss1	84	58.537	Astatotilapia_calliptera
ENSACAG00000011065	CMSS1	73	57.500	ENSAMXG00000002046	cmss1	96	49.301	Astyanax_mexicanus
ENSACAG00000011065	CMSS1	92	64.286	ENSBTAG00000013663	CMSS1	95	61.852	Bos_taurus
ENSACAG00000011065	CMSS1	98	61.567	ENSCJAG00000000610	CMSS1	99	61.567	Callithrix_jacchus
ENSACAG00000011065	CMSS1	97	62.879	ENSCAFG00000009230	CMSS1	93	62.879	Canis_familiaris
ENSACAG00000011065	CMSS1	97	62.879	ENSCAFG00020009464	-	93	62.879	Canis_lupus_dingo
ENSACAG00000011065	CMSS1	74	67.822	ENSCAFG00020024156	-	62	67.822	Canis_lupus_dingo
ENSACAG00000011065	CMSS1	96	63.359	ENSCHIG00000013003	CMSS1	93	63.359	Capra_hircus
ENSACAG00000011065	CMSS1	97	62.879	ENSTSYG00000009266	CMSS1	99	62.214	Carlito_syrichta
ENSACAG00000011065	CMSS1	68	60.963	ENSCAPG00000013584	CMSS1	88	60.963	Cavia_aperea
ENSACAG00000011065	CMSS1	97	62.500	ENSCPOG00000014680	CMSS1	84	66.807	Cavia_porcellus
ENSACAG00000011065	CMSS1	98	62.687	ENSCCAG00000034685	CMSS1	99	62.687	Cebus_capucinus
ENSACAG00000011065	CMSS1	99	61.111	ENSCATG00000031980	CMSS1	99	61.567	Cercocebus_atys
ENSACAG00000011065	CMSS1	85	68.240	ENSCLAG00000011241	CMSS1	98	68.240	Chinchilla_lanigera
ENSACAG00000011065	CMSS1	89	65.844	ENSCSAG00000006024	CMSS1	98	65.844	Chlorocebus_sabaeus
ENSACAG00000011065	CMSS1	87	50.420	ENSCHOG00000012098	CMSS1	85	50.420	Choloepus_hoffmanni
ENSACAG00000011065	CMSS1	72	42.211	ENSCING00000014848	-	99	43.316	Ciona_intestinalis
ENSACAG00000011065	CMSS1	99	61.111	ENSCANG00000031337	CMSS1	99	61.567	Colobus_angolensis_palliatus
ENSACAG00000011065	CMSS1	95	62.308	ENSCGRG00001014305	Cmss1	92	62.308	Cricetulus_griseus_chok1gshd
ENSACAG00000011065	CMSS1	95	62.692	ENSCGRG00000006722	Cmss1	99	61.923	Cricetulus_griseus_crigri
ENSACAG00000011065	CMSS1	74	64.356	ENSCSEG00000004958	cmss1	69	64.356	Cynoglossus_semilaevis
ENSACAG00000011065	CMSS1	74	65.347	ENSCVAG00000005039	cmss1	85	55.426	Cyprinodon_variegatus
ENSACAG00000011065	CMSS1	84	53.680	ENSDARG00000112579	cmss1	86	51.587	Danio_rerio
ENSACAG00000011065	CMSS1	99	59.559	ENSDNOG00000040418	CMSS1	94	59.559	Dasypus_novemcinctus
ENSACAG00000011065	CMSS1	87	68.487	ENSDORG00000010461	Cmss1	84	68.487	Dipodomys_ordii
ENSACAG00000011065	CMSS1	85	66.953	ENSEASG00005010966	CMSS1	92	70.792	Equus_asinus_asinus
ENSACAG00000011065	CMSS1	99	60.370	ENSECAG00000015662	CMSS1	99	60.370	Equus_caballus
ENSACAG00000011065	CMSS1	73	48.500	ENSEEUG00000007624	-	82	46.983	Erinaceus_europaeus
ENSACAG00000011065	CMSS1	74	61.386	ENSELUG00000019459	cmss1	91	53.430	Esox_lucius
ENSACAG00000011065	CMSS1	97	64.015	ENSFCAG00000044577	CMSS1	92	64.015	Felis_catus
ENSACAG00000011065	CMSS1	88	70.000	ENSFALG00000005816	CMSS1	99	70.000	Ficedula_albicollis
ENSACAG00000011065	CMSS1	85	66.810	ENSFDAG00000012577	CMSS1	100	66.810	Fukomys_damarensis
ENSACAG00000011065	CMSS1	84	58.261	ENSFHEG00000012008	cmss1	95	58.261	Fundulus_heteroclitus
ENSACAG00000011065	CMSS1	74	61.386	ENSGMOG00000016729	cmss1	72	61.386	Gadus_morhua
ENSACAG00000011065	CMSS1	98	70.037	ENSGALG00000015267	CMSS1	100	70.301	Gallus_gallus
ENSACAG00000011065	CMSS1	76	63.285	ENSGAFG00000021217	cmss1	77	63.366	Gambusia_affinis
ENSACAG00000011065	CMSS1	74	60.891	ENSGACG00000002798	cmss1	97	53.214	Gasterosteus_aculeatus
ENSACAG00000011065	CMSS1	98	72.862	ENSGAGG00000019861	CMSS1	100	73.180	Gopherus_agassizii
ENSACAG00000011065	CMSS1	99	62.222	ENSGGOG00000014125	CMSS1	99	62.687	Gorilla_gorilla
ENSACAG00000011065	CMSS1	74	63.861	ENSHBUG00000008431	cmss1	97	54.348	Haplochromis_burtoni
ENSACAG00000011065	CMSS1	84	67.391	ENSHGLG00000019481	CMSS1	92	67.391	Heterocephalus_glaber_female
ENSACAG00000011065	CMSS1	97	62.879	ENSHGLG00100010314	CMSS1	99	62.879	Heterocephalus_glaber_male
ENSACAG00000011065	CMSS1	74	63.861	ENSHCOG00000003222	cmss1	95	56.429	Hippocampus_comes
ENSACAG00000011065	CMSS1	96	52.364	ENSIPUG00000011591	cmss1	94	52.899	Ictalurus_punctatus
ENSACAG00000011065	CMSS1	97	63.910	ENSSTOG00000019366	CMSS1	96	62.500	Ictidomys_tridecemlineatus
ENSACAG00000011065	CMSS1	99	60.000	ENSJJAG00000014894	Cmss1	90	69.307	Jaculus_jaculus
ENSACAG00000011065	CMSS1	74	57.921	ENSKMAG00000002390	cmss1	81	57.921	Kryptolebias_marmoratus
ENSACAG00000011065	CMSS1	74	59.113	ENSLBEG00000006298	cmss1	93	54.583	Labrus_bergylta
ENSACAG00000011065	CMSS1	85	63.948	ENSLACG00000009293	CMSS1	100	63.519	Latimeria_chalumnae
ENSACAG00000011065	CMSS1	74	60.396	ENSLOCG00000009391	cmss1	94	52.030	Lepisosteus_oculatus
ENSACAG00000011065	CMSS1	85	67.672	ENSLAFG00000017509	CMSS1	100	67.672	Loxodonta_africana
ENSACAG00000011065	CMSS1	99	61.481	ENSMFAG00000045006	CMSS1	99	61.940	Macaca_fascicularis
ENSACAG00000011065	CMSS1	99	61.111	ENSMMUG00000002939	CMSS1	98	66.964	Macaca_mulatta
ENSACAG00000011065	CMSS1	99	61.481	ENSMNEG00000031315	CMSS1	99	61.940	Macaca_nemestrina
ENSACAG00000011065	CMSS1	99	60.741	ENSMLEG00000033660	CMSS1	99	61.194	Mandrillus_leucophaeus
ENSACAG00000011065	CMSS1	74	62.871	ENSMAMG00000017176	cmss1	88	56.863	Mastacembelus_armatus
ENSACAG00000011065	CMSS1	74	64.356	ENSMZEG00005021886	cmss1	84	58.537	Maylandia_zebra
ENSACAG00000011065	CMSS1	74	79.703	ENSMGAG00000014360	CMSS1	89	79.703	Meleagris_gallopavo
ENSACAG00000011065	CMSS1	95	46.899	ENSMAUG00000020609	Cmss1	89	46.124	Mesocricetus_auratus
ENSACAG00000011065	CMSS1	97	60.985	ENSMICG00000048977	CMSS1	99	61.303	Microcebus_murinus
ENSACAG00000011065	CMSS1	95	63.178	ENSMOCG00000021937	Cmss1	91	62.791	Microtus_ochrogaster
ENSACAG00000011065	CMSS1	74	60.891	ENSMMOG00000019794	cmss1	84	60.891	Mola_mola
ENSACAG00000011065	CMSS1	88	73.140	ENSMODG00000002275	CMSS1	90	73.140	Monodelphis_domestica
ENSACAG00000011065	CMSS1	89	60.331	ENSMALG00000004250	cmss1	96	54.448	Monopterus_albus
ENSACAG00000011065	CMSS1	95	65.891	MGP_CAROLIEiJ_G0020824	Cmss1	91	65.891	Mus_caroli
ENSACAG00000011065	CMSS1	95	65.891	ENSMUSG00000022748	Cmss1	91	65.891	Mus_musculus
ENSACAG00000011065	CMSS1	88	67.917	MGP_PahariEiJ_G0016524	Cmss1	86	67.917	Mus_pahari
ENSACAG00000011065	CMSS1	95	65.116	MGP_SPRETEiJ_G0021724	Cmss1	91	65.116	Mus_spretus
ENSACAG00000011065	CMSS1	87	67.932	ENSMPUG00000011324	CMSS1	90	67.932	Mustela_putorius_furo
ENSACAG00000011065	CMSS1	97	63.910	ENSMLUG00000001131	CMSS1	98	63.910	Myotis_lucifugus
ENSACAG00000011065	CMSS1	97	62.500	ENSNGAG00000020316	Cmss1	92	62.500	Nannospalax_galili
ENSACAG00000011065	CMSS1	74	64.356	ENSNBRG00000003095	cmss1	84	58.537	Neolamprologus_brichardi
ENSACAG00000011065	CMSS1	98	62.687	ENSNLEG00000034172	CMSS1	99	62.687	Nomascus_leucogenys
ENSACAG00000011065	CMSS1	85	64.655	ENSMEUG00000014505	CMSS1	100	64.655	Notamacropus_eugenii
ENSACAG00000011065	CMSS1	87	68.908	ENSOPRG00000002986	CMSS1	84	68.908	Ochotona_princeps
ENSACAG00000011065	CMSS1	97	61.278	ENSODEG00000005226	-	92	61.654	Octodon_degus
ENSACAG00000011065	CMSS1	89	64.050	ENSODEG00000003558	-	84	65.948	Octodon_degus
ENSACAG00000011065	CMSS1	97	53.030	ENSODEG00000001853	-	92	53.030	Octodon_degus
ENSACAG00000011065	CMSS1	84	56.957	ENSODEG00000009446	-	89	56.957	Octodon_degus
ENSACAG00000011065	CMSS1	74	63.861	ENSONIG00000006678	cmss1	94	58.130	Oreochromis_niloticus
ENSACAG00000011065	CMSS1	97	68.679	ENSOANG00000007529	CMSS1	100	72.532	Ornithorhynchus_anatinus
ENSACAG00000011065	CMSS1	97	63.258	ENSOCUG00000025366	CMSS1	93	64.015	Oryctolagus_cuniculus
ENSACAG00000011065	CMSS1	74	64.356	ENSORLG00000020340	cmss1	94	54.779	Oryzias_latipes
ENSACAG00000011065	CMSS1	77	56.398	ENSORLG00020012235	cmss1	85	56.931	Oryzias_latipes_hni
ENSACAG00000011065	CMSS1	74	57.426	ENSORLG00015015551	cmss1	75	57.426	Oryzias_latipes_hsok
ENSACAG00000011065	CMSS1	74	64.851	ENSOMEG00000012555	cmss1	86	58.964	Oryzias_melastigma
ENSACAG00000011065	CMSS1	85	65.086	ENSOGAG00000002045	CMSS1	100	65.086	Otolemur_garnettii
ENSACAG00000011065	CMSS1	99	62.271	ENSOARG00000017899	CMSS1	91	62.271	Ovis_aries
ENSACAG00000011065	CMSS1	97	64.015	ENSPPAG00000038515	CMSS1	94	64.015	Pan_paniscus
ENSACAG00000011065	CMSS1	97	63.636	ENSPPRG00000016767	CMSS1	92	63.636	Panthera_pardus
ENSACAG00000011065	CMSS1	97	64.015	ENSPTIG00000018274	CMSS1	92	64.015	Panthera_tigris_altaica
ENSACAG00000011065	CMSS1	98	63.433	ENSPTRG00000015157	CMSS1	98	67.078	Pan_troglodytes
ENSACAG00000011065	CMSS1	97	61.742	ENSPANG00000019980	CMSS1	98	61.742	Papio_anubis
ENSACAG00000011065	CMSS1	94	58.755	ENSPKIG00000012609	cmss1	95	60.232	Paramormyrops_kingsleyae
ENSACAG00000011065	CMSS1	85	81.974	ENSPSIG00000003849	CMSS1	100	81.974	Pelodiscus_sinensis
ENSACAG00000011065	CMSS1	74	62.069	ENSPMGG00000010286	cmss1	87	62.069	Periophthalmus_magnuspinnatus
ENSACAG00000011065	CMSS1	97	62.121	ENSPEMG00000016384	Cmss1	91	61.742	Peromyscus_maniculatus_bairdii
ENSACAG00000011065	CMSS1	75	53.431	ENSPMAG00000001146	cmss1	99	53.960	Petromyzon_marinus
ENSACAG00000011065	CMSS1	99	68.266	ENSPCIG00000015656	CMSS1	99	69.030	Phascolarctos_cinereus
ENSACAG00000011065	CMSS1	74	62.376	ENSPFOG00000016849	cmss1	97	52.899	Poecilia_formosa
ENSACAG00000011065	CMSS1	74	61.881	ENSPLAG00000008323	cmss1	97	52.536	Poecilia_latipinna
ENSACAG00000011065	CMSS1	74	62.376	ENSPMEG00000021020	cmss1	97	52.878	Poecilia_mexicana
ENSACAG00000011065	CMSS1	92	54.406	ENSPREG00000007618	cmss1	92	52.768	Poecilia_reticulata
ENSACAG00000011065	CMSS1	97	63.636	ENSPPYG00000013606	CMSS1	94	63.636	Pongo_abelii
ENSACAG00000011065	CMSS1	97	61.742	ENSPCOG00000020035	CMSS1	99	62.069	Propithecus_coquereli
ENSACAG00000011065	CMSS1	100	56.044	ENSPVAG00000017031	CMSS1	95	56.044	Pteropus_vampyrus
ENSACAG00000011065	CMSS1	64	66.477	ENSPNYG00000013428	cmss1	81	59.545	Pundamilia_nyererei
ENSACAG00000011065	CMSS1	90	54.251	ENSPNAG00000007912	cmss1	84	54.251	Pygocentrus_nattereri
ENSACAG00000011065	CMSS1	97	64.662	ENSRNOG00000027888	Cmss1	99	64.662	Rattus_norvegicus
ENSACAG00000011065	CMSS1	99	60.370	ENSRBIG00000037931	CMSS1	99	60.821	Rhinopithecus_bieti
ENSACAG00000011065	CMSS1	99	60.370	ENSRROG00000042910	CMSS1	99	60.821	Rhinopithecus_roxellana
ENSACAG00000011065	CMSS1	98	60.821	ENSSBOG00000030980	CMSS1	99	60.821	Saimiri_boliviensis_boliviensis
ENSACAG00000011065	CMSS1	74	76.238	ENSSHAG00000009321	CMSS1	91	72.532	Sarcophilus_harrisii
ENSACAG00000011065	CMSS1	91	59.036	ENSSFOG00015001509	cmss1	87	59.449	Scleropages_formosus
ENSACAG00000011065	CMSS1	91	58.167	ENSSMAG00000001653	cmss1	69	64.356	Scophthalmus_maximus
ENSACAG00000011065	CMSS1	85	61.803	ENSSDUG00000007719	cmss1	93	57.037	Seriola_dumerili
ENSACAG00000011065	CMSS1	79	62.037	ENSSLDG00000012300	cmss1	92	55.157	Seriola_lalandi_dorsalis
ENSACAG00000011065	CMSS1	87	58.650	ENSSARG00000003584	CMSS1	83	58.228	Sorex_araneus
ENSACAG00000011065	CMSS1	74	81.188	ENSSPUG00000003865	CMSS1	89	81.188	Sphenodon_punctatus
ENSACAG00000011065	CMSS1	95	55.939	ENSSPAG00000019182	cmss1	81	56.061	Stegastes_partitus
ENSACAG00000011065	CMSS1	100	61.905	ENSSSCG00000011970	CMSS1	95	61.905	Sus_scrofa
ENSACAG00000011065	CMSS1	85	71.245	ENSTGUG00000013635	CMSS1	100	71.245	Taeniopygia_guttata
ENSACAG00000011065	CMSS1	74	62.871	ENSTRUG00000015265	cmss1	95	54.815	Takifugu_rubripes
ENSACAG00000011065	CMSS1	74	56.931	ENSTNIG00000002880	cmss1	99	50.179	Tetraodon_nigroviridis
ENSACAG00000011065	CMSS1	85	46.983	ENSTBEG00000016722	CMSS1	81	46.121	Tupaia_belangeri
ENSACAG00000011065	CMSS1	97	59.091	ENSTTRG00000001562	CMSS1	92	59.091	Tursiops_truncatus
ENSACAG00000011065	CMSS1	97	63.636	ENSUAMG00000024209	CMSS1	95	68.240	Ursus_americanus
ENSACAG00000011065	CMSS1	97	62.879	ENSUMAG00000001983	CMSS1	99	62.879	Ursus_maritimus
ENSACAG00000011065	CMSS1	59	71.875	ENSVPAG00000000263	CMSS1	57	71.875	Vicugna_pacos
ENSACAG00000011065	CMSS1	74	70.297	ENSVVUG00000007776	-	80	70.297	Vulpes_vulpes
ENSACAG00000011065	CMSS1	87	68.067	ENSVVUG00000021647	-	95	68.067	Vulpes_vulpes
ENSACAG00000011065	CMSS1	96	57.955	ENSXETG00000011858	cmss1	92	57.955	Xenopus_tropicalis
ENSACAG00000011065	CMSS1	76	62.500	ENSXCOG00000018724	cmss1	69	62.871	Xiphophorus_couchianus
ENSACAG00000011065	CMSS1	76	62.500	ENSXMAG00000011243	cmss1	76	62.871	Xiphophorus_maculatus