EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000011338 (Gene tree)
Gene ID: 100556713
Gene Symbol: LARP1B
Alias: DKFZp434K245|DKFZp686E0316|FLJ10378|LARP2
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 78923 bases
Position: chr5:136260541-136339463
Accession: 100556713
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000011166	La	PF05383.17	1.6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000011400	LARP1B-201	3543	XM_003221757	ENSACAP00000011166	975 (aa)	XP_003221805	G1KL47

Gene Model

Click here to download ENSACAG00000011338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000011338's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000011338	LARP1B	89	62.955	ENSACAG00000004071	LARP1	89	66.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000011338	LARP1B	88	76.077	ENSG00000138709	LARP1B	98	74.319	Homo_sapiens
ENSACAG00000011338	LARP1B	99	55.172	ENSAPOG00000020101	larp1b	85	57.053	Acanthochromis_polyacanthus
ENSACAG00000011338	LARP1B	56	75.451	ENSAMEG00000002748	LARP1B	99	75.451	Ailuropoda_melanoleuca
ENSACAG00000011338	LARP1B	93	54.777	ENSACIG00000023890	larp1b	82	55.032	Amphilophus_citrinellus
ENSACAG00000011338	LARP1B	95	52.436	ENSAOCG00000014268	larp1b	89	54.658	Amphiprion_ocellaris
ENSACAG00000011338	LARP1B	99	56.207	ENSAPEG00000004126	larp1b	84	58.209	Amphiprion_percula
ENSACAG00000011338	LARP1B	93	57.113	ENSATEG00000017849	larp1b	84	57.219	Anabas_testudineus
ENSACAG00000011338	LARP1B	88	72.830	ENSAPLG00000010129	LARP1B	97	72.348	Anas_platyrhynchos
ENSACAG00000011338	LARP1B	77	67.932	ENSANAG00000034618	LARP1B	80	79.310	Aotus_nancymaae
ENSACAG00000011338	LARP1B	93	56.799	ENSACLG00000011948	larp1b	84	55.799	Astatotilapia_calliptera
ENSACAG00000011338	LARP1B	93	47.890	ENSAMXG00000006805	larp1b	81	51.962	Astyanax_mexicanus
ENSACAG00000011338	LARP1B	93	75.275	ENSBTAG00000012135	LARP1B	98	73.694	Bos_taurus
ENSACAG00000011338	LARP1B	86	78.452	ENSCJAG00000003338	LARP1B	99	78.266	Callithrix_jacchus
ENSACAG00000011338	LARP1B	86	78.835	ENSCAFG00000003831	LARP1B	93	77.778	Canis_familiaris
ENSACAG00000011338	LARP1B	86	77.726	ENSCAFG00020018899	LARP1B	98	74.924	Canis_lupus_dingo
ENSACAG00000011338	LARP1B	86	77.700	ENSCHIG00000023144	LARP1B	99	72.538	Capra_hircus
ENSACAG00000011338	LARP1B	86	77.700	ENSCCAG00000021948	LARP1B	98	75.455	Cebus_capucinus
ENSACAG00000011338	LARP1B	86	76.733	ENSCATG00000013541	LARP1B	98	73.346	Cercocebus_atys
ENSACAG00000011338	LARP1B	86	77.156	ENSCSAG00000003582	LARP1B	93	77.635	Chlorocebus_sabaeus
ENSACAG00000011338	LARP1B	86	69.988	ENSCHOG00000005354	LARP1B	92	69.988	Choloepus_hoffmanni
ENSACAG00000011338	LARP1B	94	81.639	ENSCPBG00000017480	LARP1B	86	81.311	Chrysemys_picta_bellii
ENSACAG00000011338	LARP1B	86	73.403	ENSCANG00000026958	LARP1B	98	68.919	Colobus_angolensis_palliatus
ENSACAG00000011338	LARP1B	93	53.822	ENSCSEG00000013519	larp1b	84	54.517	Cynoglossus_semilaevis
ENSACAG00000011338	LARP1B	93	56.243	ENSCVAG00000005046	larp1b	84	56.558	Cyprinodon_variegatus
ENSACAG00000011338	LARP1B	94	54.565	ENSDARG00000061169	larp1b	80	55.567	Danio_rerio
ENSACAG00000011338	LARP1B	52	76.529	ENSDNOG00000018765	-	99	76.575	Dasypus_novemcinctus
ENSACAG00000011338	LARP1B	75	72.178	ENSETEG00000012497	LARP1B	81	72.496	Echinops_telfairi
ENSACAG00000011338	LARP1B	99	48.851	ENSEBUG00000003668	larp1b	92	50.307	Eptatretus_burgeri
ENSACAG00000011338	LARP1B	86	77.022	ENSEASG00005018106	LARP1B	98	76.203	Equus_asinus_asinus
ENSACAG00000011338	LARP1B	93	75.000	ENSECAG00000001088	LARP1B	81	74.754	Equus_caballus
ENSACAG00000011338	LARP1B	55	72.626	ENSELUG00000023774	larp1b	74	56.213	Esox_lucius
ENSACAG00000011338	LARP1B	53	75.922	ENSFCAG00000014650	-	98	75.922	Felis_catus
ENSACAG00000011338	LARP1B	86	73.974	ENSFALG00000008098	LARP1B	92	73.271	Ficedula_albicollis
ENSACAG00000011338	LARP1B	95	55.682	ENSFHEG00000010264	larp1b	81	55.509	Fundulus_heteroclitus
ENSACAG00000011338	LARP1B	78	73.529	ENSGMOG00000005207	larp1b	73	74.790	Gadus_morhua
ENSACAG00000011338	LARP1B	93	72.319	ENSGALG00000010207	LARP1B	89	71.475	Gallus_gallus
ENSACAG00000011338	LARP1B	81	60.617	ENSGAFG00000012012	larp1b	89	61.282	Gambusia_affinis
ENSACAG00000011338	LARP1B	95	51.663	ENSGACG00000004609	larp1b	84	53.651	Gasterosteus_aculeatus
ENSACAG00000011338	LARP1B	94	80.656	ENSGAGG00000017209	LARP1B	85	81.093	Gopherus_agassizii
ENSACAG00000011338	LARP1B	86	77.113	ENSGGOG00000015900	LARP1B	98	74.125	Gorilla_gorilla
ENSACAG00000011338	LARP1B	93	56.963	ENSHBUG00000009730	larp1b	83	55.879	Haplochromis_burtoni
ENSACAG00000011338	LARP1B	66	63.231	ENSHCOG00000000918	larp1b	90	64.000	Hippocampus_comes
ENSACAG00000011338	LARP1B	74	62.963	ENSIPUG00000012138	larp1b	81	55.474	Ictalurus_punctatus
ENSACAG00000011338	LARP1B	93	55.673	ENSKMAG00000011589	larp1b	87	55.802	Kryptolebias_marmoratus
ENSACAG00000011338	LARP1B	93	56.957	ENSLBEG00000005655	larp1b	85	56.329	Labrus_bergylta
ENSACAG00000011338	LARP1B	94	72.459	ENSLACG00000015247	LARP1B	99	70.663	Latimeria_chalumnae
ENSACAG00000011338	LARP1B	89	66.079	ENSLOCG00000010684	larp1b	90	67.731	Lepisosteus_oculatus
ENSACAG00000011338	LARP1B	86	78.143	ENSMFAG00000002218	LARP1B	98	75.758	Macaca_fascicularis
ENSACAG00000011338	LARP1B	86	77.544	ENSMMUG00000021347	LARP1B	98	75.758	Macaca_mulatta
ENSACAG00000011338	LARP1B	75	80.349	ENSMNEG00000030406	LARP1B	89	81.021	Macaca_nemestrina
ENSACAG00000011338	LARP1B	86	74.736	ENSMLEG00000009306	LARP1B	93	74.736	Mandrillus_leucophaeus
ENSACAG00000011338	LARP1B	95	56.966	ENSMAMG00000000081	larp1b	86	57.384	Mastacembelus_armatus
ENSACAG00000011338	LARP1B	68	64.232	ENSMZEG00005002545	larp1b	88	64.266	Maylandia_zebra
ENSACAG00000011338	LARP1B	88	65.521	ENSMGAG00000004809	LARP1B	99	65.998	Meleagris_gallopavo
ENSACAG00000011338	LARP1B	52	56.667	ENSMICG00000028052	-	99	57.843	Microcebus_murinus
ENSACAG00000011338	LARP1B	86	80.024	ENSMICG00000036111	LARP1B	98	77.087	Microcebus_murinus
ENSACAG00000011338	LARP1B	93	76.907	ENSMODG00000012300	LARP1B	78	80.496	Monodelphis_domestica
ENSACAG00000011338	LARP1B	98	54.434	ENSMALG00000003638	larp1b	85	56.947	Monopterus_albus
ENSACAG00000011338	LARP1B	88	77.919	ENSMPUG00000017365	LARP1B	82	75.136	Mustela_putorius_furo
ENSACAG00000011338	LARP1B	88	72.798	ENSMLUG00000010229	LARP1B	96	72.879	Myotis_lucifugus
ENSACAG00000011338	LARP1B	77	59.314	ENSNBRG00000023846	larp1b	80	56.584	Neolamprologus_brichardi
ENSACAG00000011338	LARP1B	86	76.905	ENSNLEG00000013819	LARP1B	98	74.545	Nomascus_leucogenys
ENSACAG00000011338	LARP1B	74	77.866	ENSMEUG00000010308	LARP1B	78	77.866	Notamacropus_eugenii
ENSACAG00000011338	LARP1B	79	67.995	ENSOPRG00000005478	LARP1B	85	68.118	Ochotona_princeps
ENSACAG00000011338	LARP1B	93	55.705	ENSONIG00000012386	larp1b	96	55.162	Oreochromis_niloticus
ENSACAG00000011338	LARP1B	86	78.002	ENSOCUG00000013330	LARP1B	91	78.002	Oryctolagus_cuniculus
ENSACAG00000011338	LARP1B	93	56.277	ENSORLG00000017954	larp1b	84	55.319	Oryzias_latipes
ENSACAG00000011338	LARP1B	93	56.536	ENSORLG00020013081	larp1b	84	55.579	Oryzias_latipes_hni
ENSACAG00000011338	LARP1B	93	56.823	ENSORLG00015009580	larp1b	77	63.100	Oryzias_latipes_hsok
ENSACAG00000011338	LARP1B	93	56.144	ENSOMEG00000004210	larp1b	84	55.661	Oryzias_melastigma
ENSACAG00000011338	LARP1B	88	77.662	ENSOGAG00000005771	LARP1B	97	76.620	Otolemur_garnettii
ENSACAG00000011338	LARP1B	86	77.193	ENSOARG00000015300	LARP1B	93	76.257	Ovis_aries
ENSACAG00000011338	LARP1B	86	77.230	ENSPPAG00000030439	LARP1B	98	74.125	Pan_paniscus
ENSACAG00000011338	LARP1B	53	75.922	ENSPPRG00000002743	-	98	75.922	Panthera_pardus
ENSACAG00000011338	LARP1B	53	75.922	ENSPTIG00000011225	LARP1B	98	75.922	Panthera_tigris_altaica
ENSACAG00000011338	LARP1B	86	77.230	ENSPTRG00000016437	LARP1B	98	74.319	Pan_troglodytes
ENSACAG00000011338	LARP1B	86	78.026	ENSPANG00000012488	LARP1B	98	75.455	Papio_anubis
ENSACAG00000011338	LARP1B	96	51.480	ENSPKIG00000014360	larp1b	92	51.952	Paramormyrops_kingsleyae
ENSACAG00000011338	LARP1B	93	81.072	ENSPSIG00000012885	LARP1B	97	79.431	Pelodiscus_sinensis
ENSACAG00000011338	LARP1B	66	64.769	ENSPMGG00000007207	larp1b	77	65.131	Periophthalmus_magnuspinnatus
ENSACAG00000011338	LARP1B	66	59.680	ENSPMAG00000002700	larp1b	94	54.675	Petromyzon_marinus
ENSACAG00000011338	LARP1B	87	80.604	ENSPCIG00000026516	LARP1B	89	85.587	Phascolarctos_cinereus
ENSACAG00000011338	LARP1B	99	53.704	ENSPFOG00000019519	larp1b	84	55.567	Poecilia_formosa
ENSACAG00000011338	LARP1B	66	46.746	ENSPFOG00000022837	-	87	49.353	Poecilia_formosa
ENSACAG00000011338	LARP1B	99	55.255	ENSPLAG00000007115	larp1b	84	56.825	Poecilia_latipinna
ENSACAG00000011338	LARP1B	99	54.627	ENSPMEG00000001224	larp1b	84	56.448	Poecilia_mexicana
ENSACAG00000011338	LARP1B	86	76.319	ENSPCAG00000007546	LARP1B	93	76.319	Procavia_capensis
ENSACAG00000011338	LARP1B	75	93.750	ENSPCOG00000021874	LARP1B	92	83.696	Propithecus_coquereli
ENSACAG00000011338	LARP1B	86	72.652	ENSPVAG00000005373	LARP1B	93	72.652	Pteropus_vampyrus
ENSACAG00000011338	LARP1B	68	64.636	ENSPNYG00000017357	larp1b	88	64.236	Pundamilia_nyererei
ENSACAG00000011338	LARP1B	93	54.822	ENSPNAG00000008823	larp1b	78	58.960	Pygocentrus_nattereri
ENSACAG00000011338	LARP1B	52	74.125	ENSRBIG00000039982	-	98	73.359	Rhinopithecus_bieti
ENSACAG00000011338	LARP1B	86	78.026	ENSRROG00000030771	LARP1B	98	75.152	Rhinopithecus_roxellana
ENSACAG00000011338	LARP1B	67	77.794	ENSSHAG00000014474	LARP1B	99	77.695	Sarcophilus_harrisii
ENSACAG00000011338	LARP1B	88	57.475	ENSSMAG00000006347	larp1b	88	57.143	Scophthalmus_maximus
ENSACAG00000011338	LARP1B	98	55.110	ENSSDUG00000004182	larp1b	83	56.720	Seriola_dumerili
ENSACAG00000011338	LARP1B	84	62.946	ENSSLDG00000014613	larp1b	75	62.351	Seriola_lalandi_dorsalis
ENSACAG00000011338	LARP1B	83	74.816	ENSSPUG00000011837	LARP1B	88	75.219	Sphenodon_punctatus
ENSACAG00000011338	LARP1B	99	54.842	ENSSPAG00000017772	larp1b	84	57.007	Stegastes_partitus
ENSACAG00000011338	LARP1B	88	76.674	ENSSSCG00000034280	LARP1B	99	85.567	Sus_scrofa
ENSACAG00000011338	LARP1B	73	76.404	ENSTGUG00000002098	-	89	71.286	Taeniopygia_guttata
ENSACAG00000011338	LARP1B	98	54.225	ENSTRUG00000005612	larp1b	84	55.403	Takifugu_rubripes
ENSACAG00000011338	LARP1B	83	64.536	ENSTNIG00000012398	larp1b	96	53.998	Tetraodon_nigroviridis
ENSACAG00000011338	LARP1B	74	67.880	ENSTBEG00000004177	LARP1B	78	67.880	Tupaia_belangeri
ENSACAG00000011338	LARP1B	79	76.312	ENSTTRG00000012984	LARP1B	85	76.312	Tursiops_truncatus
ENSACAG00000011338	LARP1B	86	78.690	ENSUMAG00000007373	LARP1B	91	78.690	Ursus_maritimus
ENSACAG00000011338	LARP1B	86	64.906	ENSVPAG00000007223	LARP1B	93	64.906	Vicugna_pacos
ENSACAG00000011338	LARP1B	86	78.716	ENSVVUG00000011307	LARP1B	99	76.267	Vulpes_vulpes
ENSACAG00000011338	LARP1B	93	60.043	ENSXETG00000022512	larp1b	88	59.609	Xenopus_tropicalis
ENSACAG00000011338	LARP1B	73	57.263	ENSXCOG00000004435	larp1b	71	57.322	Xiphophorus_couchianus
ENSACAG00000011338	LARP1B	99	53.915	ENSXMAG00000008150	larp1b	83	55.836	Xiphophorus_maculatus