EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000011376 (Gene tree)
Gene ID: 100553451
Gene Symbol: SMARCA1
Alias: ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SWI|hSNF2L
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 1
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 34644 bases
Position: chrGL343202.1:3712625-3747268
Accession: 100553451
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000011357	ResIII	PF04851.15	1.7e-11	1	1
ENSACAP00000011357	DEAD	PF00270.29	5.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000011596	SMARCA1-201	7927	XM_003223394	ENSACAP00000011357	1049 (aa)	XP_003223442	H9GHV8

Gene Model

Click here to download ENSACAG00000011376's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000011376's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000011376	SMARCA1	52	42.807	ENSACAG00000017686	CHD1L	62	42.807
ENSACAG00000011376	SMARCA1	94	88.008	ENSACAG00000003038	SMARCA5	99	84.981
ENSACAG00000011376	SMARCA1	54	47.222	ENSACAG00000028785	HELLS	70	47.222

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000011376	SMARCA1	95	91.491	ENSG00000102038	SMARCA1	97	89.612	Homo_sapiens
ENSACAG00000011376	SMARCA1	93	84.939	ENSAPOG00000016035	smarca5	98	85.120	Acanthochromis_polyacanthus
ENSACAG00000011376	SMARCA1	95	90.208	ENSAMEG00000015218	SMARCA1	97	88.388	Ailuropoda_melanoleuca
ENSACAG00000011376	SMARCA1	86	85.255	ENSACIG00000016982	smarca5	99	85.363	Amphilophus_citrinellus
ENSACAG00000011376	SMARCA1	93	84.939	ENSAOCG00000015578	smarca5	98	82.255	Amphiprion_ocellaris
ENSACAG00000011376	SMARCA1	93	84.939	ENSAPEG00000011117	smarca5	99	85.006	Amphiprion_percula
ENSACAG00000011376	SMARCA1	97	82.087	ENSATEG00000012894	smarca5	98	81.863	Anabas_testudineus
ENSACAG00000011376	SMARCA1	94	95.825	ENSAPLG00000013149	SMARCA1	100	95.825	Anas_platyrhynchos
ENSACAG00000011376	SMARCA1	95	86.286	ENSANAG00000023098	SMARCA1	97	84.466	Aotus_nancymaae
ENSACAG00000011376	SMARCA1	94	85.031	ENSACLG00000025356	smarca5	98	82.600	Astatotilapia_calliptera
ENSACAG00000011376	SMARCA1	88	91.720	ENSAMXG00000011227	smarca1	97	93.820	Astyanax_mexicanus
ENSACAG00000011376	SMARCA1	97	81.836	ENSAMXG00000005709	smarca5	99	81.836	Astyanax_mexicanus
ENSACAG00000011376	SMARCA1	95	91.174	ENSBTAG00000002292	SMARCA1	97	88.639	Bos_taurus
ENSACAG00000011376	SMARCA1	96	62.660	WBGene00002169	isw-1	99	62.303	Caenorhabditis_elegans
ENSACAG00000011376	SMARCA1	95	91.391	ENSCJAG00000002868	SMARCA1	97	89.515	Callithrix_jacchus
ENSACAG00000011376	SMARCA1	95	81.299	ENSCAFG00000018673	SMARCA1	99	82.353	Canis_familiaris
ENSACAG00000011376	SMARCA1	95	91.491	ENSCAFG00020001751	SMARCA1	97	89.612	Canis_lupus_dingo
ENSACAG00000011376	SMARCA1	95	91.291	ENSCHIG00000009837	SMARCA1	97	89.351	Capra_hircus
ENSACAG00000011376	SMARCA1	95	91.500	ENSTSYG00000004240	SMARCA1	98	91.437	Carlito_syrichta
ENSACAG00000011376	SMARCA1	95	90.448	ENSCPOG00000013601	SMARCA1	95	90.467	Cavia_porcellus
ENSACAG00000011376	SMARCA1	95	88.488	ENSCCAG00000030817	SMARCA1	97	86.699	Cebus_capucinus
ENSACAG00000011376	SMARCA1	95	90.406	ENSCATG00000015921	SMARCA1	97	90.060	Cercocebus_atys
ENSACAG00000011376	SMARCA1	95	90.991	ENSCLAG00000002171	SMARCA1	97	89.029	Chinchilla_lanigera
ENSACAG00000011376	SMARCA1	95	91.491	ENSCSAG00000008460	SMARCA1	97	89.612	Chlorocebus_sabaeus
ENSACAG00000011376	SMARCA1	95	96.404	ENSCPBG00000001146	SMARCA1	95	96.404	Chrysemys_picta_bellii
ENSACAG00000011376	SMARCA1	94	73.891	ENSCING00000004110	swi/snf	97	73.690	Ciona_intestinalis
ENSACAG00000011376	SMARCA1	92	74.794	ENSCSAVG00000004620	-	100	75.056	Ciona_savignyi
ENSACAG00000011376	SMARCA1	95	91.391	ENSCANG00000007183	SMARCA1	97	89.515	Colobus_angolensis_palliatus
ENSACAG00000011376	SMARCA1	95	90.763	ENSCGRG00001010776	Smarca1	97	88.555	Cricetulus_griseus_chok1gshd
ENSACAG00000011376	SMARCA1	93	90.224	ENSCGRG00000015301	Smarca1	98	90.316	Cricetulus_griseus_crigri
ENSACAG00000011376	SMARCA1	93	84.631	ENSCSEG00000000328	smarca5	98	81.961	Cynoglossus_semilaevis
ENSACAG00000011376	SMARCA1	94	84.114	ENSCVAG00000008668	smarca5	99	84.552	Cyprinodon_variegatus
ENSACAG00000011376	SMARCA1	94	88.374	ENSDARG00000012776	smarca1	99	87.175	Danio_rerio
ENSACAG00000011376	SMARCA1	98	81.431	ENSDARG00000052348	smarca5	99	81.431	Danio_rerio
ENSACAG00000011376	SMARCA1	93	91.402	ENSDNOG00000004315	SMARCA1	97	89.364	Dasypus_novemcinctus
ENSACAG00000011376	SMARCA1	96	89.165	ENSDORG00000009270	Smarca1	97	89.165	Dipodomys_ordii
ENSACAG00000011376	SMARCA1	93	74.004	FBgn0011604	Iswi	98	73.788	Drosophila_melanogaster
ENSACAG00000011376	SMARCA1	77	90.909	ENSETEG00000017426	SMARCA1	85	90.909	Echinops_telfairi
ENSACAG00000011376	SMARCA1	96	81.683	ENSEBUG00000001239	smarca5	99	81.683	Eptatretus_burgeri
ENSACAG00000011376	SMARCA1	95	86.660	ENSEASG00005008218	SMARCA1	100	87.867	Equus_asinus_asinus
ENSACAG00000011376	SMARCA1	95	91.391	ENSECAG00000012106	SMARCA1	97	89.448	Equus_caballus
ENSACAG00000011376	SMARCA1	76	91.722	ENSEEUG00000014927	SMARCA1	82	91.722	Erinaceus_europaeus
ENSACAG00000011376	SMARCA1	97	89.314	ENSELUG00000010515	smarca1	99	89.586	Esox_lucius
ENSACAG00000011376	SMARCA1	95	91.409	ENSFCAG00000018496	SMARCA1	97	89.622	Felis_catus
ENSACAG00000011376	SMARCA1	87	96.714	ENSFALG00000000209	SMARCA1	98	96.820	Ficedula_albicollis
ENSACAG00000011376	SMARCA1	93	90.688	ENSFDAG00000009818	SMARCA1	97	90.688	Fukomys_damarensis
ENSACAG00000011376	SMARCA1	94	84.623	ENSFHEG00000007687	smarca5	94	84.296	Fundulus_heteroclitus
ENSACAG00000011376	SMARCA1	96	94.836	ENSGALG00000008431	SMARCA1	99	94.836	Gallus_gallus
ENSACAG00000011376	SMARCA1	94	84.725	ENSGAFG00000017731	smarca5	98	82.255	Gambusia_affinis
ENSACAG00000011376	SMARCA1	93	96.914	ENSGAGG00000023575	SMARCA1	100	96.914	Gopherus_agassizii
ENSACAG00000011376	SMARCA1	70	86.723	ENSGGOG00000012841	-	98	84.615	Gorilla_gorilla
ENSACAG00000011376	SMARCA1	95	90.691	ENSHGLG00000003080	SMARCA1	97	88.738	Heterocephalus_glaber_female
ENSACAG00000011376	SMARCA1	95	90.310	ENSHGLG00100001102	SMARCA1	100	90.310	Heterocephalus_glaber_male
ENSACAG00000011376	SMARCA1	93	84.867	ENSHCOG00000005458	smarca5	98	82.174	Hippocampus_comes
ENSACAG00000011376	SMARCA1	97	83.104	ENSIPUG00000005229	SMARCA5	98	85.020	Ictalurus_punctatus
ENSACAG00000011376	SMARCA1	97	88.496	ENSIPUG00000016905	Smarca1	99	90.296	Ictalurus_punctatus
ENSACAG00000011376	SMARCA1	95	91.409	ENSSTOG00000014524	SMARCA1	99	88.035	Ictidomys_tridecemlineatus
ENSACAG00000011376	SMARCA1	96	90.109	ENSJJAG00000002593	Smarca1	97	89.463	Jaculus_jaculus
ENSACAG00000011376	SMARCA1	93	84.560	ENSKMAG00000003777	smarca5	95	84.093	Kryptolebias_marmoratus
ENSACAG00000011376	SMARCA1	97	82.283	ENSLBEG00000018112	smarca5	98	82.059	Labrus_bergylta
ENSACAG00000011376	SMARCA1	91	83.281	ENSLBEG00000013295	SMARCA1	100	86.094	Labrus_bergylta
ENSACAG00000011376	SMARCA1	97	92.353	ENSLACG00000016697	SMARCA1	99	92.353	Latimeria_chalumnae
ENSACAG00000011376	SMARCA1	95	92.578	ENSLOCG00000014591	smarca1	97	92.578	Lepisosteus_oculatus
ENSACAG00000011376	SMARCA1	95	90.855	ENSLAFG00000000896	SMARCA1	100	90.855	Loxodonta_africana
ENSACAG00000011376	SMARCA1	95	91.491	ENSMFAG00000002117	SMARCA1	97	91.726	Macaca_fascicularis
ENSACAG00000011376	SMARCA1	95	90.406	ENSMMUG00000008818	SMARCA1	99	92.243	Macaca_mulatta
ENSACAG00000011376	SMARCA1	95	90.406	ENSMNEG00000041768	SMARCA1	97	91.726	Macaca_nemestrina
ENSACAG00000011376	SMARCA1	95	91.491	ENSMLEG00000043198	SMARCA1	97	89.612	Mandrillus_leucophaeus
ENSACAG00000011376	SMARCA1	94	84.623	ENSMAMG00000014294	smarca5	98	82.307	Mastacembelus_armatus
ENSACAG00000011376	SMARCA1	94	85.031	ENSMZEG00005009369	smarca5	98	82.600	Maylandia_zebra
ENSACAG00000011376	SMARCA1	95	94.274	ENSMGAG00000007042	SMARCA1	99	94.274	Meleagris_gallopavo
ENSACAG00000011376	SMARCA1	93	90.583	ENSMAUG00000008133	Smarca1	97	88.427	Mesocricetus_auratus
ENSACAG00000011376	SMARCA1	95	91.908	ENSMICG00000015768	SMARCA1	97	90.107	Microcebus_murinus
ENSACAG00000011376	SMARCA1	98	88.309	ENSMOCG00000009464	Smarca1	97	88.309	Microtus_ochrogaster
ENSACAG00000011376	SMARCA1	94	82.710	ENSMMOG00000005547	smarca5	99	82.710	Mola_mola
ENSACAG00000011376	SMARCA1	97	93.574	ENSMODG00000013187	-	99	93.574	Monodelphis_domestica
ENSACAG00000011376	SMARCA1	93	84.560	ENSMALG00000002081	smarca5	97	84.314	Monopterus_albus
ENSACAG00000011376	SMARCA1	95	90.159	MGP_CAROLIEiJ_G0033034	Smarca1	97	88.834	Mus_caroli
ENSACAG00000011376	SMARCA1	95	90.258	ENSMUSG00000031099	Smarca1	97	88.933	Mus_musculus
ENSACAG00000011376	SMARCA1	95	90.159	MGP_PahariEiJ_G0031579	Smarca1	97	88.834	Mus_pahari
ENSACAG00000011376	SMARCA1	95	90.258	MGP_SPRETEiJ_G0034192	Smarca1	97	88.933	Mus_spretus
ENSACAG00000011376	SMARCA1	95	90.208	ENSMPUG00000017423	SMARCA1	92	88.388	Mustela_putorius_furo
ENSACAG00000011376	SMARCA1	95	88.966	ENSMLUG00000029614	SMARCA1	98	86.705	Myotis_lucifugus
ENSACAG00000011376	SMARCA1	93	91.505	ENSNGAG00000006492	Smarca1	97	89.120	Nannospalax_galili
ENSACAG00000011376	SMARCA1	94	85.031	ENSNBRG00000004463	smarca5	99	84.701	Neolamprologus_brichardi
ENSACAG00000011376	SMARCA1	95	89.614	ENSNLEG00000015179	SMARCA1	98	90.909	Nomascus_leucogenys
ENSACAG00000011376	SMARCA1	90	85.924	ENSMEUG00000008819	SMARCA1	100	85.924	Notamacropus_eugenii
ENSACAG00000011376	SMARCA1	96	88.813	ENSODEG00000012163	SMARCA1	97	88.813	Octodon_degus
ENSACAG00000011376	SMARCA1	94	85.031	ENSONIG00000009993	smarca5	98	82.600	Oreochromis_niloticus
ENSACAG00000011376	SMARCA1	93	96.914	ENSOANG00000002862	SMARCA1	100	96.914	Ornithorhynchus_anatinus
ENSACAG00000011376	SMARCA1	95	91.291	ENSOCUG00000001047	SMARCA1	97	89.736	Oryctolagus_cuniculus
ENSACAG00000011376	SMARCA1	93	85.378	ENSORLG00000021998	smarca5	97	82.681	Oryzias_latipes
ENSACAG00000011376	SMARCA1	93	85.378	ENSORLG00020017679	smarca5	99	81.513	Oryzias_latipes_hni
ENSACAG00000011376	SMARCA1	93	85.378	ENSORLG00015017210	smarca5	98	82.583	Oryzias_latipes_hsok
ENSACAG00000011376	SMARCA1	93	85.481	ENSOMEG00000000086	smarca5	98	82.681	Oryzias_melastigma
ENSACAG00000011376	SMARCA1	93	91.287	ENSOGAG00000004399	SMARCA1	97	89.391	Otolemur_garnettii
ENSACAG00000011376	SMARCA1	95	90.128	ENSOARG00000014638	SMARCA1	100	91.735	Ovis_aries
ENSACAG00000011376	SMARCA1	95	91.491	ENSPPAG00000034647	SMARCA1	97	89.612	Pan_paniscus
ENSACAG00000011376	SMARCA1	95	91.409	ENSPPRG00000008929	SMARCA1	97	89.622	Panthera_pardus
ENSACAG00000011376	SMARCA1	95	89.479	ENSPTIG00000000915	SMARCA1	98	89.479	Panthera_tigris_altaica
ENSACAG00000011376	SMARCA1	95	91.491	ENSPTRG00000049876	SMARCA1	97	90.060	Pan_troglodytes
ENSACAG00000011376	SMARCA1	95	91.491	ENSPANG00000003871	SMARCA1	97	89.612	Papio_anubis
ENSACAG00000011376	SMARCA1	92	88.912	ENSPKIG00000013411	smarca1	97	88.912	Paramormyrops_kingsleyae
ENSACAG00000011376	SMARCA1	95	95.360	ENSPSIG00000010101	SMARCA1	100	96.914	Pelodiscus_sinensis
ENSACAG00000011376	SMARCA1	93	91.198	ENSPEMG00000017503	Smarca1	97	89.021	Peromyscus_maniculatus_bairdii
ENSACAG00000011376	SMARCA1	97	94.597	ENSPCIG00000015460	SMARCA1	99	95.171	Phascolarctos_cinereus
ENSACAG00000011376	SMARCA1	93	84.765	ENSPFOG00000007649	smarca5	98	82.059	Poecilia_formosa
ENSACAG00000011376	SMARCA1	93	84.765	ENSPLAG00000003363	smarca5	98	82.059	Poecilia_latipinna
ENSACAG00000011376	SMARCA1	93	84.867	ENSPMEG00000019849	smarca5	98	82.157	Poecilia_mexicana
ENSACAG00000011376	SMARCA1	93	84.867	ENSPREG00000023250	smarca5	98	82.157	Poecilia_reticulata
ENSACAG00000011376	SMARCA1	95	88.689	ENSPPYG00000020703	SMARCA1	97	86.893	Pongo_abelii
ENSACAG00000011376	SMARCA1	74	87.879	ENSPCOG00000020722	SMARCA1	94	88.106	Propithecus_coquereli
ENSACAG00000011376	SMARCA1	87	90.593	ENSPVAG00000003805	SMARCA1	91	90.593	Pteropus_vampyrus
ENSACAG00000011376	SMARCA1	56	87.671	ENSPNYG00000012299	smarca5	91	86.757	Pundamilia_nyererei
ENSACAG00000011376	SMARCA1	95	90.509	ENSRNOG00000003762	Smarca1	97	88.749	Rattus_norvegicus
ENSACAG00000011376	SMARCA1	95	91.391	ENSRROG00000034167	SMARCA1	97	89.515	Rhinopithecus_roxellana
ENSACAG00000011376	SMARCA1	95	90.316	ENSSBOG00000020641	SMARCA1	100	92.041	Saimiri_boliviensis_boliviensis
ENSACAG00000011376	SMARCA1	93	88.386	ENSSHAG00000013518	SMARCA1	99	88.386	Sarcophilus_harrisii
ENSACAG00000011376	SMARCA1	97	89.638	ENSSFOG00015009043	smarca1	99	89.638	Scleropages_formosus
ENSACAG00000011376	SMARCA1	94	84.725	ENSSFOG00015016794	smarca5	100	85.052	Scleropages_formosus
ENSACAG00000011376	SMARCA1	97	82.087	ENSSMAG00000004801	smarca5	97	81.863	Scophthalmus_maximus
ENSACAG00000011376	SMARCA1	94	84.216	ENSSDUG00000020690	smarca5	95	83.891	Seriola_dumerili
ENSACAG00000011376	SMARCA1	94	84.216	ENSSLDG00000025190	smarca5	95	83.891	Seriola_lalandi_dorsalis
ENSACAG00000011376	SMARCA1	86	83.824	ENSSARG00000000842	SMARCA1	91	83.824	Sorex_araneus
ENSACAG00000011376	SMARCA1	94	97.457	ENSSPUG00000000590	SMARCA1	98	95.945	Sphenodon_punctatus
ENSACAG00000011376	SMARCA1	94	84.521	ENSSPAG00000002894	smarca5	97	84.995	Stegastes_partitus
ENSACAG00000011376	SMARCA1	93	91.795	ENSSSCG00000012649	SMARCA1	95	90.827	Sus_scrofa
ENSACAG00000011376	SMARCA1	94	96.232	ENSTGUG00000003899	-	100	96.232	Taeniopygia_guttata
ENSACAG00000011376	SMARCA1	94	84.725	ENSTRUG00000014094	smarca5	98	82.307	Takifugu_rubripes
ENSACAG00000011376	SMARCA1	93	83.811	ENSTNIG00000017717	smarca5	94	83.181	Tetraodon_nigroviridis
ENSACAG00000011376	SMARCA1	93	85.020	ENSTBEG00000014973	SMARCA1	99	85.020	Tupaia_belangeri
ENSACAG00000011376	SMARCA1	92	87.984	ENSTTRG00000006168	SMARCA1	99	87.984	Tursiops_truncatus
ENSACAG00000011376	SMARCA1	95	90.991	ENSUAMG00000020201	SMARCA1	97	89.126	Ursus_americanus
ENSACAG00000011376	SMARCA1	95	85.771	ENSUMAG00000004073	SMARCA1	99	91.647	Ursus_maritimus
ENSACAG00000011376	SMARCA1	73	92.754	ENSVPAG00000010492	-	79	92.754	Vicugna_pacos
ENSACAG00000011376	SMARCA1	95	91.500	ENSVVUG00000008878	SMARCA1	99	92.573	Vulpes_vulpes
ENSACAG00000011376	SMARCA1	95	92.879	ENSXETG00000001526	smarca1	100	92.879	Xenopus_tropicalis
ENSACAG00000011376	SMARCA1	94	84.623	ENSXCOG00000011170	smarca5	99	82.382	Xiphophorus_couchianus
ENSACAG00000011376	SMARCA1	94	84.623	ENSXMAG00000009678	smarca5	98	85.777	Xiphophorus_maculatus