EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000011833 (Gene tree)
Gene ID: 100564653
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 16580 bases
Position: chr5:100050009-100066588
Accession: 100564653
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000011594	RRM_1	PF00076.22	6.7e-39	1	3
ENSACAP00000011594	RRM_1	PF00076.22	6.7e-39	2	3
ENSACAP00000011594	RRM_1	PF00076.22	6.7e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000011834	RBM47-201	1800	XM_008111625	ENSACAP00000011594	599 (aa)	-	G1KLJ7

Gene Model

Click here to download ENSACAG00000011833's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000011833's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000011833	RBM47	50	54.667	ENSACAG00000015234	SYNCRIP	77	44.989
ENSACAG00000011833	RBM47	50	72.185	ENSACAG00000015599	RBM46	59	72.185
ENSACAG00000011833	RBM47	70	57.859	ENSACAG00000015269	A1CF	74	58.542
ENSACAG00000011833	RBM47	52	54.777	ENSACAG00000017593	HNRNPR	63	47.433

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000011833	RBM47	100	85.667	ENSG00000163694	RBM47	100	88.571	Homo_sapiens
ENSACAG00000011833	RBM47	100	76.080	ENSAPOG00000011062	rbm47	100	78.517	Acanthochromis_polyacanthus
ENSACAG00000011833	RBM47	100	85.050	ENSAMEG00000009672	RBM47	100	85.880	Ailuropoda_melanoleuca
ENSACAG00000011833	RBM47	100	76.040	ENSACIG00000011531	rbm47	100	75.707	Amphilophus_citrinellus
ENSACAG00000011833	RBM47	100	77.038	ENSAOCG00000022245	rbm47	100	78.517	Amphiprion_ocellaris
ENSACAG00000011833	RBM47	100	76.872	ENSAPEG00000018304	rbm47	100	78.517	Amphiprion_percula
ENSACAG00000011833	RBM47	100	75.896	ENSATEG00000018400	rbm47	100	74.715	Anabas_testudineus
ENSACAG00000011833	RBM47	100	86.855	ENSAPLG00000013974	RBM47	100	85.857	Anas_platyrhynchos
ENSACAG00000011833	RBM47	100	86.000	ENSANAG00000029440	RBM47	100	86.667	Aotus_nancymaae
ENSACAG00000011833	RBM47	100	75.450	ENSACLG00000016902	rbm47	100	80.103	Astatotilapia_calliptera
ENSACAG00000011833	RBM47	96	77.015	ENSAMXG00000021794	rbm47	100	74.675	Astyanax_mexicanus
ENSACAG00000011833	RBM47	100	86.500	ENSBTAG00000002356	RBM47	100	86.333	Bos_taurus
ENSACAG00000011833	RBM47	96	87.197	ENSCJAG00000019385	RBM47	100	86.356	Callithrix_jacchus
ENSACAG00000011833	RBM47	100	84.307	ENSCAFG00000015898	RBM47	100	84.307	Canis_familiaris
ENSACAG00000011833	RBM47	86	84.884	ENSCAFG00020010558	RBM47	94	84.350	Canis_lupus_dingo
ENSACAG00000011833	RBM47	100	86.333	ENSCHIG00000026214	RBM47	100	86.167	Capra_hircus
ENSACAG00000011833	RBM47	86	74.464	ENSTSYG00000033612	RBM47	93	74.269	Carlito_syrichta
ENSACAG00000011833	RBM47	100	79.633	ENSCAPG00000008426	RBM47	100	79.299	Cavia_aperea
ENSACAG00000011833	RBM47	100	84.975	ENSCPOG00000014100	RBM47	100	84.975	Cavia_porcellus
ENSACAG00000011833	RBM47	100	86.023	ENSCCAG00000030129	-	100	86.689	Cebus_capucinus
ENSACAG00000011833	RBM47	99	58.970	ENSCCAG00000024397	-	99	58.804	Cebus_capucinus
ENSACAG00000011833	RBM47	100	85.667	ENSCATG00000042064	RBM47	100	86.167	Cercocebus_atys
ENSACAG00000011833	RBM47	100	84.975	ENSCLAG00000001684	RBM47	100	84.641	Chinchilla_lanigera
ENSACAG00000011833	RBM47	100	85.667	ENSCSAG00000017060	RBM47	100	86.167	Chlorocebus_sabaeus
ENSACAG00000011833	RBM47	88	80.000	ENSCHOG00000011731	RBM47	88	80.269	Choloepus_hoffmanni
ENSACAG00000011833	RBM47	100	90.349	ENSCPBG00000013831	RBM47	100	90.183	Chrysemys_picta_bellii
ENSACAG00000011833	RBM47	100	86.000	ENSCANG00000019997	RBM47	100	86.167	Colobus_angolensis_palliatus
ENSACAG00000011833	RBM47	100	84.219	ENSCGRG00001000623	-	100	84.053	Cricetulus_griseus_chok1gshd
ENSACAG00000011833	RBM47	100	58.804	ENSCGRG00001020102	-	100	62.333	Cricetulus_griseus_chok1gshd
ENSACAG00000011833	RBM47	100	83.389	ENSCGRG00000007762	-	100	83.223	Cricetulus_griseus_crigri
ENSACAG00000011833	RBM47	100	58.638	ENSCGRG00000014760	-	100	62.167	Cricetulus_griseus_crigri
ENSACAG00000011833	RBM47	100	74.461	ENSCSEG00000004545	rbm47	100	74.295	Cynoglossus_semilaevis
ENSACAG00000011833	RBM47	100	75.042	ENSCVAG00000020144	rbm47	100	78.772	Cyprinodon_variegatus
ENSACAG00000011833	RBM47	96	77.491	ENSDARG00000061985	rbm47	100	75.244	Danio_rerio
ENSACAG00000011833	RBM47	100	84.167	ENSDNOG00000046854	RBM47	100	84.667	Dasypus_novemcinctus
ENSACAG00000011833	RBM47	100	85.240	ENSDORG00000010144	Rbm47	100	85.572	Dipodomys_ordii
ENSACAG00000011833	RBM47	96	87.392	ENSETEG00000009194	RBM47	100	85.548	Echinops_telfairi
ENSACAG00000011833	RBM47	99	57.566	ENSEBUG00000011912	rbm47	99	57.730	Eptatretus_burgeri
ENSACAG00000011833	RBM47	100	85.667	ENSEASG00005008443	RBM47	100	85.833	Equus_asinus_asinus
ENSACAG00000011833	RBM47	100	85.667	ENSECAG00000004400	RBM47	100	85.833	Equus_caballus
ENSACAG00000011833	RBM47	76	84.483	ENSEEUG00000001194	RBM47	75	85.345	Erinaceus_europaeus
ENSACAG00000011833	RBM47	100	71.222	ENSELUG00000006148	rbm47	100	78.841	Esox_lucius
ENSACAG00000011833	RBM47	100	85.977	ENSFCAG00000012399	RBM47	100	85.810	Felis_catus
ENSACAG00000011833	RBM47	100	88.667	ENSFALG00000002861	RBM47	100	88.667	Ficedula_albicollis
ENSACAG00000011833	RBM47	100	83.667	ENSFDAG00000016326	RBM47	100	82.972	Fukomys_damarensis
ENSACAG00000011833	RBM47	100	75.748	ENSFHEG00000007938	rbm47	100	74.542	Fundulus_heteroclitus
ENSACAG00000011833	RBM47	100	73.021	ENSGMOG00000014802	rbm47	100	73.021	Gadus_morhua
ENSACAG00000011833	RBM47	63	88.654	ENSGALG00000014267	RBM47	99	88.889	Gallus_gallus
ENSACAG00000011833	RBM47	63	80.952	ENSGAFG00000020571	rbm47	98	80.952	Gambusia_affinis
ENSACAG00000011833	RBM47	100	73.333	ENSGACG00000016223	rbm47	100	77.238	Gasterosteus_aculeatus
ENSACAG00000011833	RBM47	100	90.349	ENSGAGG00000020051	RBM47	100	90.183	Gopherus_agassizii
ENSACAG00000011833	RBM47	100	85.667	ENSGGOG00000001367	RBM47	100	86.167	Gorilla_gorilla
ENSACAG00000011833	RBM47	100	75.367	ENSHBUG00000003520	rbm47	100	80.103	Haplochromis_burtoni
ENSACAG00000011833	RBM47	85	76.923	ENSHGLG00000016914	RBM47	100	80.000	Heterocephalus_glaber_female
ENSACAG00000011833	RBM47	100	75.459	ENSHGLG00100003071	-	100	75.125	Heterocephalus_glaber_male
ENSACAG00000011833	RBM47	100	83.472	ENSHGLG00100014028	-	100	83.306	Heterocephalus_glaber_male
ENSACAG00000011833	RBM47	99	75.541	ENSHCOG00000002074	rbm47	99	79.284	Hippocampus_comes
ENSACAG00000011833	RBM47	100	75.748	ENSIPUG00000004743	rbm47	100	75.914	Ictalurus_punctatus
ENSACAG00000011833	RBM47	100	85.333	ENSSTOG00000004727	RBM47	100	86.207	Ictidomys_tridecemlineatus
ENSACAG00000011833	RBM47	100	84.333	ENSJJAG00000013823	Rbm47	100	84.833	Jaculus_jaculus
ENSACAG00000011833	RBM47	100	75.537	ENSKMAG00000000084	rbm47	100	78.005	Kryptolebias_marmoratus
ENSACAG00000011833	RBM47	100	76.159	ENSLBEG00000008436	rbm47	100	75.456	Labrus_bergylta
ENSACAG00000011833	RBM47	100	84.140	ENSLACG00000007196	RBM47	100	84.307	Latimeria_chalumnae
ENSACAG00000011833	RBM47	100	81.833	ENSLOCG00000012966	rbm47	95	81.500	Lepisosteus_oculatus
ENSACAG00000011833	RBM47	100	85.810	ENSLAFG00000011998	RBM47	100	85.643	Loxodonta_africana
ENSACAG00000011833	RBM47	100	85.667	ENSMFAG00000037967	RBM47	100	86.167	Macaca_fascicularis
ENSACAG00000011833	RBM47	100	85.667	ENSMMUG00000012036	RBM47	100	86.167	Macaca_mulatta
ENSACAG00000011833	RBM47	100	85.833	ENSMNEG00000040774	RBM47	100	86.167	Macaca_nemestrina
ENSACAG00000011833	RBM47	100	89.274	ENSMLEG00000041432	RBM47	100	89.274	Mandrillus_leucophaeus
ENSACAG00000011833	RBM47	100	75.530	ENSMAMG00000019143	rbm47	100	79.897	Mastacembelus_armatus
ENSACAG00000011833	RBM47	100	75.450	ENSMZEG00005023659	rbm47	100	75.614	Maylandia_zebra
ENSACAG00000011833	RBM47	100	89.850	ENSMGAG00000012226	RBM47	100	89.185	Meleagris_gallopavo
ENSACAG00000011833	RBM47	100	84.027	ENSMAUG00000006493	Rbm47	100	84.526	Mesocricetus_auratus
ENSACAG00000011833	RBM47	100	80.801	ENSMICG00000026417	RBM47	100	81.432	Microcebus_murinus
ENSACAG00000011833	RBM47	100	84.500	ENSMOCG00000021170	Rbm47	100	85.000	Microtus_ochrogaster
ENSACAG00000011833	RBM47	100	76.020	ENSMMOG00000007260	rbm47	100	75.163	Mola_mola
ENSACAG00000011833	RBM47	52	79.048	ENSMODG00000015426	-	98	79.048	Monodelphis_domestica
ENSACAG00000011833	RBM47	100	87.833	ENSMODG00000007003	RBM47	100	87.333	Monodelphis_domestica
ENSACAG00000011833	RBM47	100	78.130	ENSMODG00000020561	-	100	78.130	Monodelphis_domestica
ENSACAG00000011833	RBM47	100	74.834	ENSMALG00000005167	rbm47	100	78.663	Monopterus_albus
ENSACAG00000011833	RBM47	100	84.333	MGP_CAROLIEiJ_G0027258	Rbm47	100	84.500	Mus_caroli
ENSACAG00000011833	RBM47	100	84.667	ENSMUSG00000070780	Rbm47	100	84.833	Mus_musculus
ENSACAG00000011833	RBM47	100	84.500	MGP_PahariEiJ_G0017040	Rbm47	100	84.667	Mus_pahari
ENSACAG00000011833	RBM47	100	84.167	MGP_SPRETEiJ_G0028253	Rbm47	100	85.714	Mus_spretus
ENSACAG00000011833	RBM47	100	85.643	ENSMPUG00000006177	RBM47	94	86.144	Mustela_putorius_furo
ENSACAG00000011833	RBM47	100	85.358	ENSMLUG00000000889	RBM47	100	85.524	Myotis_lucifugus
ENSACAG00000011833	RBM47	100	85.358	ENSNGAG00000003325	Rbm47	100	85.857	Nannospalax_galili
ENSACAG00000011833	RBM47	100	75.654	ENSNBRG00000015092	rbm47	100	75.654	Neolamprologus_brichardi
ENSACAG00000011833	RBM47	100	85.500	ENSNLEG00000017151	RBM47	100	87.533	Nomascus_leucogenys
ENSACAG00000011833	RBM47	72	84.223	ENSMEUG00000009516	-	99	84.223	Notamacropus_eugenii
ENSACAG00000011833	RBM47	76	91.286	ENSOPRG00000016507	-	75	91.286	Ochotona_princeps
ENSACAG00000011833	RBM47	100	85.142	ENSODEG00000004873	RBM47	100	84.808	Octodon_degus
ENSACAG00000011833	RBM47	100	74.959	ENSONIG00000009061	rbm47	100	74.104	Oreochromis_niloticus
ENSACAG00000011833	RBM47	100	83.389	ENSOANG00000008978	RBM47	100	84.385	Ornithorhynchus_anatinus
ENSACAG00000011833	RBM47	100	85.309	ENSOCUG00000012034	RBM47	100	85.142	Oryctolagus_cuniculus
ENSACAG00000011833	RBM47	100	74.585	ENSORLG00000005847	rbm47	100	78.608	Oryzias_latipes
ENSACAG00000011833	RBM47	100	74.751	ENSORLG00020005154	rbm47	100	78.608	Oryzias_latipes_hni
ENSACAG00000011833	RBM47	100	74.751	ENSORLG00015000066	rbm47	100	78.608	Oryzias_latipes_hsok
ENSACAG00000011833	RBM47	100	75.788	ENSOMEG00000010730	rbm47	100	74.917	Oryzias_melastigma
ENSACAG00000011833	RBM47	100	85.643	ENSOGAG00000029367	-	100	86.144	Otolemur_garnettii
ENSACAG00000011833	RBM47	100	79.132	ENSOGAG00000025193	-	100	79.466	Otolemur_garnettii
ENSACAG00000011833	RBM47	100	78.167	ENSOARG00000012711	RBM47	100	78.607	Ovis_aries
ENSACAG00000011833	RBM47	100	85.500	ENSPPAG00000029763	RBM47	100	86.000	Pan_paniscus
ENSACAG00000011833	RBM47	100	83.139	ENSPPRG00000012873	RBM47	99	86.472	Panthera_pardus
ENSACAG00000011833	RBM47	85	84.646	ENSPTIG00000017046	RBM47	100	82.874	Panthera_tigris_altaica
ENSACAG00000011833	RBM47	100	85.667	ENSPTRG00000016006	RBM47	100	86.167	Pan_troglodytes
ENSACAG00000011833	RBM47	100	85.667	ENSPANG00000005980	RBM47	100	86.167	Papio_anubis
ENSACAG00000011833	RBM47	98	71.597	ENSPKIG00000013431	RBM47	98	80.311	Paramormyrops_kingsleyae
ENSACAG00000011833	RBM47	96	75.559	ENSPKIG00000005037	rbm47	100	73.684	Paramormyrops_kingsleyae
ENSACAG00000011833	RBM47	89	89.869	ENSPSIG00000017516	RBM47	97	89.493	Pelodiscus_sinensis
ENSACAG00000011833	RBM47	96	76.562	ENSPMGG00000018540	rbm47	100	74.709	Periophthalmus_magnuspinnatus
ENSACAG00000011833	RBM47	100	84.193	ENSPEMG00000011088	Rbm47	100	85.025	Peromyscus_maniculatus_bairdii
ENSACAG00000011833	RBM47	97	78.522	ENSPFOG00000007997	rbm47	100	74.959	Poecilia_formosa
ENSACAG00000011833	RBM47	97	78.351	ENSPLAG00000002072	rbm47	100	81.432	Poecilia_latipinna
ENSACAG00000011833	RBM47	100	77.575	ENSPMEG00000017492	rbm47	100	79.028	Poecilia_mexicana
ENSACAG00000011833	RBM47	97	78.694	ENSPREG00000008456	rbm47	100	81.432	Poecilia_reticulata
ENSACAG00000011833	RBM47	98	74.329	ENSPPYG00000014688	RBM47	100	73.277	Pongo_abelii
ENSACAG00000011833	RBM47	81	86.318	ENSPCAG00000011879	RBM47	81	86.318	Procavia_capensis
ENSACAG00000011833	RBM47	100	82.304	ENSPCOG00000023451	RBM47	100	82.638	Propithecus_coquereli
ENSACAG00000011833	RBM47	100	85.691	ENSPVAG00000003812	RBM47	100	85.691	Pteropus_vampyrus
ENSACAG00000011833	RBM47	100	75.407	ENSPNYG00000022868	rbm47	100	75.570	Pundamilia_nyererei
ENSACAG00000011833	RBM47	96	77.740	ENSPNAG00000007940	rbm47	100	75.689	Pygocentrus_nattereri
ENSACAG00000011833	RBM47	100	85.000	ENSRNOG00000002408	Rbm47	100	85.167	Rattus_norvegicus
ENSACAG00000011833	RBM47	100	86.000	ENSRBIG00000039601	RBM47	100	86.167	Rhinopithecus_bieti
ENSACAG00000011833	RBM47	100	86.000	ENSRROG00000044696	RBM47	100	86.167	Rhinopithecus_roxellana
ENSACAG00000011833	RBM47	100	82.304	ENSSBOG00000028475	RBM47	100	87.037	Saimiri_boliviensis_boliviensis
ENSACAG00000011833	RBM47	100	87.333	ENSSHAG00000017576	RBM47	100	87.500	Sarcophilus_harrisii
ENSACAG00000011833	RBM47	99	72.667	ENSSFOG00015024101	RBM47	99	72.500	Scleropages_formosus
ENSACAG00000011833	RBM47	96	73.875	ENSSFOG00015012445	rbm47	100	70.820	Scleropages_formosus
ENSACAG00000011833	RBM47	100	73.290	ENSSMAG00000009744	rbm47	100	77.121	Scophthalmus_maximus
ENSACAG00000011833	RBM47	100	77.243	ENSSDUG00000022684	rbm47	100	76.539	Seriola_dumerili
ENSACAG00000011833	RBM47	100	77.741	ENSSLDG00000003109	rbm47	100	78.734	Seriola_lalandi_dorsalis
ENSACAG00000011833	RBM47	84	85.778	ENSSARG00000001735	RBM47	75	85.778	Sorex_araneus
ENSACAG00000011833	RBM47	100	89.000	ENSSPUG00000007515	RBM47	100	90.451	Sphenodon_punctatus
ENSACAG00000011833	RBM47	100	77.076	ENSSPAG00000001257	rbm47	100	78.517	Stegastes_partitus
ENSACAG00000011833	RBM47	100	86.500	ENSSSCG00000008796	RBM47	100	86.000	Sus_scrofa
ENSACAG00000011833	RBM47	100	88.833	ENSTGUG00000008705	RBM47	100	89.000	Taeniopygia_guttata
ENSACAG00000011833	RBM47	100	74.751	ENSTRUG00000014050	rbm47	100	74.043	Takifugu_rubripes
ENSACAG00000011833	RBM47	100	74.510	ENSTNIG00000006127	rbm47	100	74.673	Tetraodon_nigroviridis
ENSACAG00000011833	RBM47	77	80.723	ENSTBEG00000001607	RBM47	76	80.902	Tupaia_belangeri
ENSACAG00000011833	RBM47	100	85.333	ENSTTRG00000002839	RBM47	100	85.167	Tursiops_truncatus
ENSACAG00000011833	RBM47	100	86.477	ENSUAMG00000021346	RBM47	100	86.311	Ursus_americanus
ENSACAG00000011833	RBM47	57	84.103	ENSVPAG00000000641	-	57	83.590	Vicugna_pacos
ENSACAG00000011833	RBM47	100	84.474	ENSVVUG00000014774	RBM47	100	84.474	Vulpes_vulpes
ENSACAG00000011833	RBM47	100	84.080	ENSXETG00000012802	rbm47	100	84.245	Xenopus_tropicalis
ENSACAG00000011833	RBM47	88	80.902	ENSXCOG00000000780	rbm47	100	80.902	Xiphophorus_couchianus
ENSACAG00000011833	RBM47	100	76.578	ENSXMAG00000009874	rbm47	100	78.517	Xiphophorus_maculatus