EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000011857 (Gene tree)
Gene ID: 100558185
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 42629 bases
Position: chrGL343883.1:63595-106223
Accession: 100558185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000011749	Ago_hook	PF10427.9	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000011992	TNRC6A-201	9937	XM_008123371	ENSACAP00000011749	1931 (aa)	XP_016854047	H9GIC8

Gene Model

Click here to download ENSACAG00000011857's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000011857's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000011857	TNRC6A	92	37.684	ENSACAG00000016198	TNRC6C	96	36.377

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000011857	TNRC6A	100	56.496	ENSG00000090905	TNRC6A	99	74.419	Homo_sapiens
ENSACAG00000011857	TNRC6A	97	56.238	ENSAMEG00000009333	TNRC6A	96	55.504	Ailuropoda_melanoleuca
ENSACAG00000011857	TNRC6A	97	59.373	ENSAPLG00000009978	TNRC6A	98	58.588	Anas_platyrhynchos
ENSACAG00000011857	TNRC6A	100	56.634	ENSANAG00000025252	TNRC6A	100	54.501	Aotus_nancymaae
ENSACAG00000011857	TNRC6A	90	45.889	ENSAMXG00000019919	tnrc6a	97	45.582	Astyanax_mexicanus
ENSACAG00000011857	TNRC6A	100	55.561	ENSBTAG00000017999	TNRC6A	100	53.525	Bos_taurus
ENSACAG00000011857	TNRC6A	100	56.332	ENSCJAG00000020677	TNRC6A	100	54.309	Callithrix_jacchus
ENSACAG00000011857	TNRC6A	99	56.704	ENSCAFG00000017531	TNRC6A	100	54.620	Canis_familiaris
ENSACAG00000011857	TNRC6A	97	55.522	ENSCAFG00020021160	TNRC6A	95	54.550	Canis_lupus_dingo
ENSACAG00000011857	TNRC6A	99	55.982	ENSCHIG00000019448	TNRC6A	99	68.966	Capra_hircus
ENSACAG00000011857	TNRC6A	100	56.220	ENSTSYG00000012711	TNRC6A	100	54.396	Carlito_syrichta
ENSACAG00000011857	TNRC6A	99	54.821	ENSCPOG00000036684	TNRC6A	99	53.084	Cavia_porcellus
ENSACAG00000011857	TNRC6A	100	56.433	ENSCCAG00000033664	TNRC6A	100	54.400	Cebus_capucinus
ENSACAG00000011857	TNRC6A	99	55.044	ENSCATG00000019284	TNRC6A	99	53.013	Cercocebus_atys
ENSACAG00000011857	TNRC6A	99	54.817	ENSCLAG00000010217	TNRC6A	99	53.467	Chinchilla_lanigera
ENSACAG00000011857	TNRC6A	100	56.649	ENSCSAG00000006561	TNRC6A	100	54.664	Chlorocebus_sabaeus
ENSACAG00000011857	TNRC6A	94	56.120	ENSCHOG00000009374	TNRC6A	88	54.194	Choloepus_hoffmanni
ENSACAG00000011857	TNRC6A	91	58.224	ENSCPBG00000001881	TNRC6A	99	56.786	Chrysemys_picta_bellii
ENSACAG00000011857	TNRC6A	100	56.655	ENSCANG00000041549	TNRC6A	100	54.669	Colobus_angolensis_palliatus
ENSACAG00000011857	TNRC6A	100	55.007	ENSCGRG00001015021	Tnrc6a	100	53.272	Cricetulus_griseus_chok1gshd
ENSACAG00000011857	TNRC6A	99	54.301	ENSCGRG00000013351	Tnrc6a	99	52.764	Cricetulus_griseus_crigri
ENSACAG00000011857	TNRC6A	90	46.843	ENSDARG00000079688	tnrc6a	96	46.738	Danio_rerio
ENSACAG00000011857	TNRC6A	97	55.869	ENSDNOG00000013989	TNRC6A	99	54.210	Dasypus_novemcinctus
ENSACAG00000011857	TNRC6A	100	56.592	ENSEASG00005017693	TNRC6A	100	68.966	Equus_asinus_asinus
ENSACAG00000011857	TNRC6A	97	65.413	ENSECAG00000025056	TNRC6A	100	68.966	Equus_caballus
ENSACAG00000011857	TNRC6A	97	52.293	ENSEEUG00000004530	TNRC6A	99	50.396	Erinaceus_europaeus
ENSACAG00000011857	TNRC6A	100	57.094	ENSFCAG00000025236	TNRC6A	100	55.409	Felis_catus
ENSACAG00000011857	TNRC6A	99	58.648	ENSFALG00000003757	TNRC6A	99	57.185	Ficedula_albicollis
ENSACAG00000011857	TNRC6A	91	58.356	ENSGALG00000006068	TNRC6A	99	57.189	Gallus_gallus
ENSACAG00000011857	TNRC6A	91	57.935	ENSGAGG00000023209	TNRC6A	99	56.446	Gopherus_agassizii
ENSACAG00000011857	TNRC6A	99	56.281	ENSGGOG00000005137	TNRC6A	99	54.138	Gorilla_gorilla
ENSACAG00000011857	TNRC6A	94	45.261	ENSHGLG00000007368	-	99	42.886	Heterocephalus_glaber_female
ENSACAG00000011857	TNRC6A	99	54.197	ENSHGLG00000012474	-	100	52.102	Heterocephalus_glaber_female
ENSACAG00000011857	TNRC6A	99	54.658	ENSHGLG00100012496	-	99	52.606	Heterocephalus_glaber_male
ENSACAG00000011857	TNRC6A	99	56.759	ENSSTOG00000023394	TNRC6A	99	54.801	Ictidomys_tridecemlineatus
ENSACAG00000011857	TNRC6A	96	52.183	ENSLACG00000006277	TNRC6A	98	51.668	Latimeria_chalumnae
ENSACAG00000011857	TNRC6A	99	67.511	ENSLOCG00000005517	tnrc6a	92	64.449	Lepisosteus_oculatus
ENSACAG00000011857	TNRC6A	94	54.948	ENSLAFG00000004209	TNRC6A	99	52.395	Loxodonta_africana
ENSACAG00000011857	TNRC6A	94	56.816	ENSMFAG00000003824	TNRC6A	95	54.696	Macaca_fascicularis
ENSACAG00000011857	TNRC6A	100	56.621	ENSMMUG00000020428	TNRC6A	100	54.581	Macaca_mulatta
ENSACAG00000011857	TNRC6A	100	56.347	ENSMNEG00000034854	TNRC6A	100	54.327	Macaca_nemestrina
ENSACAG00000011857	TNRC6A	100	54.422	ENSMLEG00000042737	TNRC6A	97	52.947	Mandrillus_leucophaeus
ENSACAG00000011857	TNRC6A	99	58.030	ENSMGAG00000006455	TNRC6A	99	56.845	Meleagris_gallopavo
ENSACAG00000011857	TNRC6A	100	55.240	ENSMAUG00000012750	Tnrc6a	100	53.197	Mesocricetus_auratus
ENSACAG00000011857	TNRC6A	100	56.448	ENSMICG00000030685	TNRC6A	100	54.466	Microcebus_murinus
ENSACAG00000011857	TNRC6A	100	55.447	ENSMOCG00000000152	Tnrc6a	100	53.603	Microtus_ochrogaster
ENSACAG00000011857	TNRC6A	99	55.969	ENSMODG00000016348	TNRC6A	99	54.475	Monodelphis_domestica
ENSACAG00000011857	TNRC6A	99	55.666	MGP_CAROLIEiJ_G0030425	Tnrc6a	99	59.282	Mus_caroli
ENSACAG00000011857	TNRC6A	100	55.191	ENSMUSG00000052707	Tnrc6a	99	59.141	Mus_musculus
ENSACAG00000011857	TNRC6A	99	54.698	MGP_PahariEiJ_G0013635	Tnrc6a	99	58.740	Mus_pahari
ENSACAG00000011857	TNRC6A	100	56.409	MGP_SPRETEiJ_G0031539	Tnrc6a	99	58.939	Mus_spretus
ENSACAG00000011857	TNRC6A	97	51.465	ENSMPUG00000012324	TNRC6A	97	50.499	Mustela_putorius_furo
ENSACAG00000011857	TNRC6A	97	55.813	ENSMLUG00000002701	TNRC6A	97	55.008	Myotis_lucifugus
ENSACAG00000011857	TNRC6A	99	54.968	ENSNGAG00000020702	Tnrc6a	99	53.084	Nannospalax_galili
ENSACAG00000011857	TNRC6A	94	55.885	ENSNLEG00000011851	TNRC6A	95	53.719	Nomascus_leucogenys
ENSACAG00000011857	TNRC6A	75	67.519	ENSMEUG00000015959	-	71	66.071	Notamacropus_eugenii
ENSACAG00000011857	TNRC6A	95	63.423	ENSOPRG00000005819	TNRC6A	96	59.048	Ochotona_princeps
ENSACAG00000011857	TNRC6A	97	53.458	ENSODEG00000012802	TNRC6A	95	52.359	Octodon_degus
ENSACAG00000011857	TNRC6A	88	58.501	ENSOANG00000007672	TNRC6A	99	56.355	Ornithorhynchus_anatinus
ENSACAG00000011857	TNRC6A	97	55.607	ENSOCUG00000004325	TNRC6A	98	54.763	Oryctolagus_cuniculus
ENSACAG00000011857	TNRC6A	99	56.114	ENSOGAG00000006666	TNRC6A	100	54.425	Otolemur_garnettii
ENSACAG00000011857	TNRC6A	99	56.173	ENSOARG00000017950	TNRC6A	99	54.173	Ovis_aries
ENSACAG00000011857	TNRC6A	99	56.393	ENSPPAG00000028379	TNRC6A	99	54.414	Pan_paniscus
ENSACAG00000011857	TNRC6A	100	56.836	ENSPPRG00000005861	TNRC6A	100	55.112	Panthera_pardus
ENSACAG00000011857	TNRC6A	99	56.308	ENSPTIG00000006346	TNRC6A	93	55.694	Panthera_tigris_altaica
ENSACAG00000011857	TNRC6A	94	57.329	ENSPTRG00000007898	TNRC6A	95	55.199	Pan_troglodytes
ENSACAG00000011857	TNRC6A	100	54.422	ENSPANG00000018523	TNRC6A	100	52.748	Papio_anubis
ENSACAG00000011857	TNRC6A	86	60.096	ENSPKIG00000012859	tnrc6a	99	44.163	Paramormyrops_kingsleyae
ENSACAG00000011857	TNRC6A	79	56.040	ENSPSIG00000003965	TNRC6A	99	55.041	Pelodiscus_sinensis
ENSACAG00000011857	TNRC6A	100	55.534	ENSPEMG00000016318	Tnrc6a	100	53.693	Peromyscus_maniculatus_bairdii
ENSACAG00000011857	TNRC6A	97	57.310	ENSPCIG00000012106	TNRC6A	98	56.433	Phascolarctos_cinereus
ENSACAG00000011857	TNRC6A	99	56.140	ENSPPYG00000007202	TNRC6A	99	54.247	Pongo_abelii
ENSACAG00000011857	TNRC6A	95	51.760	ENSPCAG00000008260	TNRC6A	89	50.271	Procavia_capensis
ENSACAG00000011857	TNRC6A	100	54.820	ENSPCOG00000010134	TNRC6A	100	52.850	Propithecus_coquereli
ENSACAG00000011857	TNRC6A	88	49.055	ENSPVAG00000012066	TNRC6A	99	48.443	Pteropus_vampyrus
ENSACAG00000011857	TNRC6A	100	54.572	ENSRNOG00000024737	Tnrc6a	100	52.654	Rattus_norvegicus
ENSACAG00000011857	TNRC6A	97	56.128	ENSRBIG00000014222	TNRC6A	99	54.181	Rhinopithecus_bieti
ENSACAG00000011857	TNRC6A	100	56.668	ENSRROG00000032360	TNRC6A	100	54.678	Rhinopithecus_roxellana
ENSACAG00000011857	TNRC6A	97	56.616	ENSSBOG00000036197	TNRC6A	99	55.301	Saimiri_boliviensis_boliviensis
ENSACAG00000011857	TNRC6A	91	55.783	ENSSHAG00000008811	TNRC6A	99	54.502	Sarcophilus_harrisii
ENSACAG00000011857	TNRC6A	90	47.981	ENSSFOG00015008920	tnrc6a	95	50.118	Scleropages_formosus
ENSACAG00000011857	TNRC6A	68	57.810	ENSSARG00000002479	TNRC6A	86	57.482	Sorex_araneus
ENSACAG00000011857	TNRC6A	90	58.534	ENSSPUG00000010525	TNRC6A	99	57.112	Sphenodon_punctatus
ENSACAG00000011857	TNRC6A	100	55.447	ENSSSCG00000038870	TNRC6A	99	55.408	Sus_scrofa
ENSACAG00000011857	TNRC6A	99	57.403	ENSTGUG00000006142	TNRC6A	100	55.615	Taeniopygia_guttata
ENSACAG00000011857	TNRC6A	97	53.915	ENSTBEG00000014965	TNRC6A	96	53.151	Tupaia_belangeri
ENSACAG00000011857	TNRC6A	91	68.114	ENSTTRG00000002008	TNRC6A	89	66.070	Tursiops_truncatus
ENSACAG00000011857	TNRC6A	77	51.470	ENSUAMG00000006656	-	89	51.011	Ursus_americanus
ENSACAG00000011857	TNRC6A	94	57.292	ENSUMAG00000008274	TNRC6A	99	54.699	Ursus_maritimus
ENSACAG00000011857	TNRC6A	55	61.919	ENSVPAG00000010764	-	54	60.682	Vicugna_pacos
ENSACAG00000011857	TNRC6A	99	56.420	ENSVVUG00000005380	TNRC6A	99	54.528	Vulpes_vulpes
ENSACAG00000011857	TNRC6A	94	50.234	ENSXETG00000030437	TNRC6A	97	49.137	Xenopus_tropicalis