EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000011931 (Gene tree)
Gene ID: 100563157
Gene Symbol: -
Alias: -
Full Name: RNA binding protein fox-1 homolog 1-like
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 22121 bases
Position: chr6:78796480-78818600
Accession: 100563157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000009830	Fox-1_C	PF12414.8	1.5e-33	1	1
ENSACAP00000020876	Fox-1_C	PF12414.8	2.6e-33	1	1
ENSACAP00000009830	RRM_1	PF00076.22	4.9e-18	1	1
ENSACAP00000020876	RRM_1	PF00076.22	8.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000010030	-	801	XM_008113558	ENSACAP00000009830	266 (aa)	XP_008111765	L7MZV0
ENSACAT00000025773	-	1431	-	ENSACAP00000020876	378 (aa)	-	G1KYG2

Gene Model

Click here to download ENSACAG00000011931's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000011931's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000011931	-	95	61.029	ENSACAG00000016093	RBFOX3	74	61.397
ENSACAG00000011931	-	97	53.943	ENSACAG00000004013	RBFOX1	75	59.677
ENSACAG00000011931	-	92	62.324	ENSACAG00000016535	RBFOX2	63	61.972

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000011931	-	83	73.932	ENSAPOG00000016304	rbfox1l	62	71.369	Acanthochromis_polyacanthus
ENSACAG00000011931	-	89	66.529	ENSACIG00000006441	rbfox1l	61	64.372	Amphilophus_citrinellus
ENSACAG00000011931	-	89	70.445	ENSAOCG00000020938	rbfox1l	72	68.924	Amphiprion_ocellaris
ENSACAG00000011931	-	89	73.790	ENSAPEG00000008232	rbfox1l	65	72.727	Amphiprion_percula
ENSACAG00000011931	-	89	71.721	ENSATEG00000022649	rbfox1l	63	70.683	Anabas_testudineus
ENSACAG00000011931	-	89	73.577	ENSACLG00000021394	rbfox1l	64	72.112	Astatotilapia_calliptera
ENSACAG00000011931	-	89	75.610	ENSAMXG00000010470	rbfox1l	64	72.908	Astyanax_mexicanus
ENSACAG00000011931	-	94	84.739	ENSCPBG00000010944	-	74	80.443	Chrysemys_picta_bellii
ENSACAG00000011931	-	91	75.100	ENSCSEG00000018898	rbfox1l	64	75.904	Cynoglossus_semilaevis
ENSACAG00000011931	-	97	70.000	ENSCVAG00000007986	rbfox1l	69	69.630	Cyprinodon_variegatus
ENSACAG00000011931	-	91	70.000	ENSDARG00000021184	rbfox1l	64	72.112	Danio_rerio
ENSACAG00000011931	-	89	68.605	ENSELUG00000015077	rbfox1l	69	66.543	Esox_lucius
ENSACAG00000011931	-	59	75.610	ENSFHEG00000016557	rbfox1l	51	75.610	Fundulus_heteroclitus
ENSACAG00000011931	-	91	73.518	ENSGMOG00000005040	rbfox1l	65	73.123	Gadus_morhua
ENSACAG00000011931	-	91	72.727	ENSGAFG00000013211	rbfox1l	68	72.332	Gambusia_affinis
ENSACAG00000011931	-	91	71.146	ENSGACG00000010757	rbfox1l	64	70.751	Gasterosteus_aculeatus
ENSACAG00000011931	-	97	85.328	ENSGAGG00000012440	-	92	85.328	Gopherus_agassizii
ENSACAG00000011931	-	89	73.577	ENSHBUG00000013406	rbfox1l	64	72.112	Haplochromis_burtoni
ENSACAG00000011931	-	89	74.089	ENSHCOG00000020771	rbfox1l	66	73.413	Hippocampus_comes
ENSACAG00000011931	-	97	71.269	ENSIPUG00000000065	rbfox1l	74	70.896	Ictalurus_punctatus
ENSACAG00000011931	-	89	73.200	ENSKMAG00000005146	rbfox1l	64	72.441	Kryptolebias_marmoratus
ENSACAG00000011931	-	91	73.123	ENSLBEG00000017089	rbfox1l	64	73.518	Labrus_bergylta
ENSACAG00000011931	-	89	73.387	ENSMAMG00000019480	rbfox1l	64	72.332	Mastacembelus_armatus
ENSACAG00000011931	-	89	73.577	ENSMZEG00005016374	rbfox1l	64	72.112	Maylandia_zebra
ENSACAG00000011931	-	91	71.371	ENSMMOG00000016530	rbfox1l	64	71.774	Mola_mola
ENSACAG00000011931	-	91	73.896	ENSMALG00000009384	rbfox1l	66	73.494	Monopterus_albus
ENSACAG00000011931	-	89	74.486	ENSNBRG00000003346	rbfox1l	64	72.984	Neolamprologus_brichardi
ENSACAG00000011931	-	89	73.984	ENSONIG00000012754	rbfox1l	64	72.510	Oreochromis_niloticus
ENSACAG00000011931	-	89	75.403	ENSORLG00000011269	rbfox1l	65	74.308	Oryzias_latipes
ENSACAG00000011931	-	89	75.000	ENSORLG00020000162	rbfox1l	67	73.913	Oryzias_latipes_hni
ENSACAG00000011931	-	89	75.403	ENSORLG00015013464	rbfox1l	65	74.308	Oryzias_latipes_hsok
ENSACAG00000011931	-	89	74.194	ENSOMEG00000010584	rbfox1l	65	73.123	Oryzias_melastigma
ENSACAG00000011931	-	91	73.600	ENSPKIG00000012029	rbfox1l	64	73.600	Paramormyrops_kingsleyae
ENSACAG00000011931	-	89	69.959	ENSPMGG00000012082	rbfox1l	63	68.952	Periophthalmus_magnuspinnatus
ENSACAG00000011931	-	91	72.332	ENSPFOG00000009338	rbfox1l	65	71.937	Poecilia_formosa
ENSACAG00000011931	-	86	63.333	ENSPLAG00000012816	rbfox1l	72	62.500	Poecilia_latipinna
ENSACAG00000011931	-	91	68.651	ENSPMEG00000017597	rbfox1l	63	68.526	Poecilia_mexicana
ENSACAG00000011931	-	91	68.651	ENSPREG00000007940	rbfox1l	63	68.526	Poecilia_reticulata
ENSACAG00000011931	-	89	73.171	ENSPNYG00000002098	rbfox1l	64	71.713	Pundamilia_nyererei
ENSACAG00000011931	-	88	76.639	ENSPNAG00000001620	rbfox1l	64	73.705	Pygocentrus_nattereri
ENSACAG00000011931	-	89	75.918	ENSSFOG00015000675	rbfox1l	66	74.800	Scleropages_formosus
ENSACAG00000011931	-	91	72.727	ENSSMAG00000013090	rbfox1l	66	72.332	Scophthalmus_maximus
ENSACAG00000011931	-	89	69.880	ENSSDUG00000008705	rbfox1l	64	71.260	Seriola_dumerili
ENSACAG00000011931	-	89	69.600	ENSSLDG00000022256	rbfox1l	64	70.980	Seriola_lalandi_dorsalis
ENSACAG00000011931	-	89	73.790	ENSSPAG00000016620	rbfox1l	65	72.727	Stegastes_partitus
ENSACAG00000011931	-	85	74.678	ENSTRUG00000015905	rbfox1l	62	74.249	Takifugu_rubripes
ENSACAG00000011931	-	91	71.429	ENSTNIG00000008088	rbfox1l	99	71.429	Tetraodon_nigroviridis
ENSACAG00000011931	-	91	72.332	ENSXMAG00000023471	rbfox1l	65	71.937	Xiphophorus_maculatus