EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000012141 (Gene tree)
Gene ID: 100557301
Gene Symbol: POLR1A
Alias: DKFZP586M0122|FLJ21915|RPA1|RPO1-4
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 38873 bases
Position: chr6:60729980-60768852
Accession: 100557301
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000012126	RNA_pol_Rpb1_5	PF04998.17	2.6e-101	1	1
ENSACAP00000012126	RNA_pol_Rpb1_4	PF05000.17	1.1e-22	1	1
ENSACAP00000012126	RNA_pol_Rpb1_2	PF00623.20	2.1e-70	1	1
ENSACAP00000012126	RNA_pol_Rpb1_3	PF04983.18	6.6e-38	1	1
ENSACAP00000012126	RNA_pol_Rpb1_1	PF04997.12	1.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000012371	POLR1A-201	5966	XM_003222344	ENSACAP00000012126	1704 (aa)	XP_003222392	G1KM74

Gene Model

Click here to download ENSACAG00000012141's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000012141's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000012141	POLR1A	99	69.469	ENSG00000068654	POLR1A	99	69.942	Homo_sapiens
ENSACAG00000012141	POLR1A	69	66.780	ENSAPOG00000017945	polr1a	98	67.119	Acanthochromis_polyacanthus
ENSACAG00000012141	POLR1A	99	68.906	ENSAMEG00000005807	POLR1A	99	72.569	Ailuropoda_melanoleuca
ENSACAG00000012141	POLR1A	96	66.158	ENSACIG00000022147	polr1a	99	66.736	Amphilophus_citrinellus
ENSACAG00000012141	POLR1A	99	65.046	ENSAOCG00000017336	polr1a	99	67.680	Amphiprion_ocellaris
ENSACAG00000012141	POLR1A	99	65.046	ENSAPEG00000016105	polr1a	97	70.213	Amphiprion_percula
ENSACAG00000012141	POLR1A	99	65.078	ENSATEG00000016773	polr1a	99	65.195	Anabas_testudineus
ENSACAG00000012141	POLR1A	85	72.046	ENSAPLG00000013871	POLR1A	99	73.265	Anas_platyrhynchos
ENSACAG00000012141	POLR1A	99	69.182	ENSANAG00000033927	POLR1A	99	70.092	Aotus_nancymaae
ENSACAG00000012141	POLR1A	99	61.435	ENSACLG00000020541	polr1a	99	61.561	Astatotilapia_calliptera
ENSACAG00000012141	POLR1A	99	68.848	ENSBTAG00000006481	POLR1A	99	68.964	Bos_taurus
ENSACAG00000012141	POLR1A	99	38.187	WBGene00012999	rpoa-1	98	38.357	Caenorhabditis_elegans
ENSACAG00000012141	POLR1A	99	68.797	ENSCJAG00000019547	POLR1A	99	69.844	Callithrix_jacchus
ENSACAG00000012141	POLR1A	99	69.422	ENSCAFG00000007613	POLR1A	99	69.769	Canis_familiaris
ENSACAG00000012141	POLR1A	99	69.422	ENSCAFG00020014752	POLR1A	99	69.769	Canis_lupus_dingo
ENSACAG00000012141	POLR1A	99	69.441	ENSCHIG00000018204	POLR1A	99	69.499	Capra_hircus
ENSACAG00000012141	POLR1A	99	68.382	ENSTSYG00000002761	POLR1A	99	69.191	Carlito_syrichta
ENSACAG00000012141	POLR1A	97	65.109	ENSCAPG00000010132	POLR1A	100	65.552	Cavia_aperea
ENSACAG00000012141	POLR1A	99	68.321	ENSCPOG00000012350	POLR1A	99	69.012	Cavia_porcellus
ENSACAG00000012141	POLR1A	99	68.797	ENSCCAG00000019839	POLR1A	99	69.844	Cebus_capucinus
ENSACAG00000012141	POLR1A	99	68.714	ENSCATG00000029786	POLR1A	99	69.585	Cercocebus_atys
ENSACAG00000012141	POLR1A	99	67.876	ENSCLAG00000005187	POLR1A	99	68.696	Chinchilla_lanigera
ENSACAG00000012141	POLR1A	99	68.714	ENSCSAG00000016251	POLR1A	99	69.643	Chlorocebus_sabaeus
ENSACAG00000012141	POLR1A	99	74.898	ENSCPBG00000001115	POLR1A	99	74.898	Chrysemys_picta_bellii
ENSACAG00000012141	POLR1A	99	45.907	ENSCSAVG00000007184	-	91	54.172	Ciona_savignyi
ENSACAG00000012141	POLR1A	99	66.879	ENSCANG00000031785	POLR1A	99	66.936	Colobus_angolensis_palliatus
ENSACAG00000012141	POLR1A	96	69.841	ENSCGRG00001006651	Polr1a	99	69.841	Cricetulus_griseus_chok1gshd
ENSACAG00000012141	POLR1A	60	66.634	ENSCGRG00000010834	Polr1a	100	67.507	Cricetulus_griseus_crigri
ENSACAG00000012141	POLR1A	99	61.377	ENSCSEG00000020190	polr1a	99	61.435	Cynoglossus_semilaevis
ENSACAG00000012141	POLR1A	99	63.070	ENSCVAG00000020941	polr1a	99	63.668	Cyprinodon_variegatus
ENSACAG00000012141	POLR1A	99	64.918	ENSDARG00000098375	polr1a	99	64.959	Danio_rerio
ENSACAG00000012141	POLR1A	99	65.298	ENSDNOG00000010829	POLR1A	99	65.761	Dasypus_novemcinctus
ENSACAG00000012141	POLR1A	99	68.369	ENSDORG00000008298	Polr1a	99	68.369	Dipodomys_ordii
ENSACAG00000012141	POLR1A	79	44.876	FBgn0019938	RpI1	99	43.275	Drosophila_melanogaster
ENSACAG00000012141	POLR1A	72	93.750	ENSETEG00000000412	-	72	93.750	Echinops_telfairi
ENSACAG00000012141	POLR1A	86	51.740	ENSEBUG00000005667	-	99	46.357	Eptatretus_burgeri
ENSACAG00000012141	POLR1A	99	69.497	ENSEASG00005001625	POLR1A	99	69.382	Equus_asinus_asinus
ENSACAG00000012141	POLR1A	99	69.497	ENSECAG00000010092	POLR1A	99	72.211	Equus_caballus
ENSACAG00000012141	POLR1A	99	69.497	ENSECAG00000030510	-	99	72.211	Equus_caballus
ENSACAG00000012141	POLR1A	99	69.497	ENSECAG00000036306	-	99	72.211	Equus_caballus
ENSACAG00000012141	POLR1A	81	80.315	ENSEEUG00000000676	POLR1A	80	80.315	Erinaceus_europaeus
ENSACAG00000012141	POLR1A	99	65.505	ENSELUG00000012769	polr1a	99	66.044	Esox_lucius
ENSACAG00000012141	POLR1A	99	69.231	ENSFCAG00000008966	POLR1A	99	69.636	Felis_catus
ENSACAG00000012141	POLR1A	99	70.650	ENSFALG00000010082	POLR1A	99	71.697	Ficedula_albicollis
ENSACAG00000012141	POLR1A	99	67.550	ENSFDAG00000013726	POLR1A	99	68.235	Fukomys_damarensis
ENSACAG00000012141	POLR1A	99	61.163	ENSFHEG00000005996	polr1a	99	61.816	Fundulus_heteroclitus
ENSACAG00000012141	POLR1A	99	58.377	ENSGMOG00000002230	polr1a	99	58.979	Gadus_morhua
ENSACAG00000012141	POLR1A	90	69.543	ENSGALG00000038160	-	98	70.382	Gallus_gallus
ENSACAG00000012141	POLR1A	99	63.149	ENSGAFG00000015266	polr1a	99	63.599	Gambusia_affinis
ENSACAG00000012141	POLR1A	99	62.579	ENSGACG00000018791	polr1a	99	62.961	Gasterosteus_aculeatus
ENSACAG00000012141	POLR1A	90	75.736	ENSGAGG00000004984	-	95	80.382	Gopherus_agassizii
ENSACAG00000012141	POLR1A	99	69.005	ENSGGOG00000001788	POLR1A	99	70.000	Gorilla_gorilla
ENSACAG00000012141	POLR1A	90	63.730	ENSHBUG00000020021	polr1a	99	63.730	Haplochromis_burtoni
ENSACAG00000012141	POLR1A	99	68.696	ENSHGLG00000006334	POLR1A	99	68.837	Heterocephalus_glaber_female
ENSACAG00000012141	POLR1A	99	68.439	ENSHGLG00100006614	POLR1A	99	68.464	Heterocephalus_glaber_male
ENSACAG00000012141	POLR1A	99	61.877	ENSHCOG00000003345	polr1a	99	62.016	Hippocampus_comes
ENSACAG00000012141	POLR1A	99	64.706	ENSIPUG00000013174	polr1a	99	64.822	Ictalurus_punctatus
ENSACAG00000012141	POLR1A	99	68.957	ENSSTOG00000012580	POLR1A	99	68.928	Ictidomys_tridecemlineatus
ENSACAG00000012141	POLR1A	99	68.692	ENSJJAG00000013113	Polr1a	99	69.414	Jaculus_jaculus
ENSACAG00000012141	POLR1A	99	64.503	ENSKMAG00000007399	polr1a	99	64.503	Kryptolebias_marmoratus
ENSACAG00000012141	POLR1A	96	66.574	ENSLBEG00000015401	polr1a	99	66.920	Labrus_bergylta
ENSACAG00000012141	POLR1A	53	72.717	ENSLACG00000003218	polr1a	100	72.717	Latimeria_chalumnae
ENSACAG00000012141	POLR1A	99	66.609	ENSLOCG00000010881	polr1a	99	67.345	Lepisosteus_oculatus
ENSACAG00000012141	POLR1A	99	69.803	ENSLAFG00000014948	POLR1A	99	69.832	Loxodonta_africana
ENSACAG00000012141	POLR1A	99	68.772	ENSMFAG00000046097	POLR1A	99	69.700	Macaca_fascicularis
ENSACAG00000012141	POLR1A	99	68.714	ENSMMUG00000015815	POLR1A	99	69.643	Macaca_mulatta
ENSACAG00000012141	POLR1A	99	68.772	ENSMNEG00000043313	POLR1A	99	69.700	Macaca_nemestrina
ENSACAG00000012141	POLR1A	99	68.370	ENSMLEG00000042428	POLR1A	99	69.240	Mandrillus_leucophaeus
ENSACAG00000012141	POLR1A	99	64.195	ENSMAMG00000016565	polr1a	99	64.854	Mastacembelus_armatus
ENSACAG00000012141	POLR1A	99	64.921	ENSMZEG00005004915	polr1a	99	65.038	Maylandia_zebra
ENSACAG00000012141	POLR1A	99	68.609	ENSMGAG00000013111	POLR1A	99	69.467	Meleagris_gallopavo
ENSACAG00000012141	POLR1A	92	68.817	ENSMAUG00000008497	Polr1a	100	69.007	Mesocricetus_auratus
ENSACAG00000012141	POLR1A	99	69.009	ENSMICG00000000757	POLR1A	99	69.417	Microcebus_murinus
ENSACAG00000012141	POLR1A	99	69.204	ENSMOCG00000000122	Polr1a	99	69.432	Microtus_ochrogaster
ENSACAG00000012141	POLR1A	99	63.562	ENSMMOG00000010216	polr1a	99	63.972	Mola_mola
ENSACAG00000012141	POLR1A	99	65.462	ENSMODG00000009335	POLR1A	99	65.577	Monodelphis_domestica
ENSACAG00000012141	POLR1A	99	64.452	ENSMALG00000013363	polr1a	99	64.606	Monopterus_albus
ENSACAG00000012141	POLR1A	99	67.686	MGP_CAROLIEiJ_G0028494	Polr1a	99	68.522	Mus_caroli
ENSACAG00000012141	POLR1A	99	68.580	ENSMUSG00000049553	Polr1a	99	68.735	Mus_musculus
ENSACAG00000012141	POLR1A	99	68.384	MGP_PahariEiJ_G0022230	Polr1a	99	69.043	Mus_pahari
ENSACAG00000012141	POLR1A	99	67.084	MGP_SPRETEiJ_G0029499	Polr1a	99	67.827	Mus_spretus
ENSACAG00000012141	POLR1A	99	68.934	ENSMPUG00000009135	POLR1A	99	69.618	Mustela_putorius_furo
ENSACAG00000012141	POLR1A	99	68.573	ENSMLUG00000015723	POLR1A	99	69.151	Myotis_lucifugus
ENSACAG00000012141	POLR1A	99	68.696	ENSNGAG00000017907	Polr1a	99	68.812	Nannospalax_galili
ENSACAG00000012141	POLR1A	99	64.980	ENSNBRG00000000519	polr1a	99	65.096	Neolamprologus_brichardi
ENSACAG00000012141	POLR1A	99	67.202	ENSNLEG00000002264	POLR1A	99	68.067	Nomascus_leucogenys
ENSACAG00000012141	POLR1A	75	81.890	ENSMEUG00000011665	-	75	81.890	Notamacropus_eugenii
ENSACAG00000012141	POLR1A	99	63.429	ENSOPRG00000008269	POLR1A	99	63.920	Ochotona_princeps
ENSACAG00000012141	POLR1A	99	67.977	ENSODEG00000003542	POLR1A	99	68.699	Octodon_degus
ENSACAG00000012141	POLR1A	99	64.662	ENSONIG00000015895	polr1a	99	64.743	Oreochromis_niloticus
ENSACAG00000012141	POLR1A	99	68.894	ENSOCUG00000010138	POLR1A	99	69.930	Oryctolagus_cuniculus
ENSACAG00000012141	POLR1A	99	64.028	ENSORLG00000008753	polr1a	99	64.028	Oryzias_latipes
ENSACAG00000012141	POLR1A	99	61.977	ENSORLG00020020726	polr1a	99	62.093	Oryzias_latipes_hni
ENSACAG00000012141	POLR1A	99	59.860	ENSORLG00015016071	polr1a	99	59.860	Oryzias_latipes_hsok
ENSACAG00000012141	POLR1A	99	69.382	ENSOGAG00000004031	POLR1A	99	69.440	Otolemur_garnettii
ENSACAG00000012141	POLR1A	99	68.876	ENSOARG00000020601	POLR1A	99	69.129	Ovis_aries
ENSACAG00000012141	POLR1A	99	69.120	ENSPPAG00000042450	POLR1A	99	70.116	Pan_paniscus
ENSACAG00000012141	POLR1A	99	69.053	ENSPPRG00000006702	POLR1A	99	69.693	Panthera_pardus
ENSACAG00000012141	POLR1A	99	68.642	ENSPTIG00000018783	POLR1A	99	69.280	Panthera_tigris_altaica
ENSACAG00000012141	POLR1A	99	69.538	ENSPTRG00000012147	POLR1A	99	69.884	Pan_troglodytes
ENSACAG00000012141	POLR1A	99	68.657	ENSPANG00000025908	POLR1A	99	69.528	Papio_anubis
ENSACAG00000012141	POLR1A	94	71.329	ENSPKIG00000005468	polr1a	98	71.329	Paramormyrops_kingsleyae
ENSACAG00000012141	POLR1A	63	73.277	ENSPSIG00000009321	-	99	73.371	Pelodiscus_sinensis
ENSACAG00000012141	POLR1A	55	66.952	ENSPMGG00000009718	polr1a	95	66.952	Periophthalmus_magnuspinnatus
ENSACAG00000012141	POLR1A	99	69.164	ENSPEMG00000022224	Polr1a	99	69.351	Peromyscus_maniculatus_bairdii
ENSACAG00000012141	POLR1A	95	68.598	ENSPCIG00000004222	POLR1A	99	68.800	Phascolarctos_cinereus
ENSACAG00000012141	POLR1A	99	64.207	ENSPFOG00000005025	polr1a	99	64.555	Poecilia_formosa
ENSACAG00000012141	POLR1A	99	64.261	ENSPLAG00000021389	polr1a	99	64.631	Poecilia_latipinna
ENSACAG00000012141	POLR1A	99	62.514	ENSPMEG00000006463	polr1a	99	63.146	Poecilia_mexicana
ENSACAG00000012141	POLR1A	99	64.053	ENSPREG00000002389	polr1a	99	64.344	Poecilia_reticulata
ENSACAG00000012141	POLR1A	99	68.145	ENSPPYG00000012217	POLR1A	99	69.191	Pongo_abelii
ENSACAG00000012141	POLR1A	87	68.000	ENSPCAG00000011582	POLR1A	87	68.000	Procavia_capensis
ENSACAG00000012141	POLR1A	99	68.527	ENSPCOG00000026987	POLR1A	99	69.533	Propithecus_coquereli
ENSACAG00000012141	POLR1A	95	68.429	ENSPVAG00000012674	POLR1A	95	69.236	Pteropus_vampyrus
ENSACAG00000012141	POLR1A	99	64.863	ENSPNYG00000000026	polr1a	99	64.980	Pundamilia_nyererei
ENSACAG00000012141	POLR1A	99	65.425	ENSPNAG00000019223	polr1a	99	67.334	Pygocentrus_nattereri
ENSACAG00000012141	POLR1A	99	69.200	ENSRNOG00000009545	Polr1a	99	69.472	Rattus_norvegicus
ENSACAG00000012141	POLR1A	99	68.606	ENSRBIG00000028335	POLR1A	99	69.538	Rhinopithecus_bieti
ENSACAG00000012141	POLR1A	99	68.548	ENSRROG00000031473	POLR1A	100	68.902	Rhinopithecus_roxellana
ENSACAG00000012141	POLR1A	99	37.663	YOR341W	RPA190	99	37.734	Saccharomyces_cerevisiae
ENSACAG00000012141	POLR1A	99	69.023	ENSSBOG00000030262	POLR1A	99	69.902	Saimiri_boliviensis_boliviensis
ENSACAG00000012141	POLR1A	99	62.665	ENSSHAG00000014739	POLR1A	99	63.182	Sarcophilus_harrisii
ENSACAG00000012141	POLR1A	99	66.511	ENSSFOG00015019716	polr1a	99	66.706	Scleropages_formosus
ENSACAG00000012141	POLR1A	99	64.514	ENSSMAG00000014342	polr1a	99	64.689	Scophthalmus_maximus
ENSACAG00000012141	POLR1A	99	65.467	ENSSDUG00000014631	polr1a	99	66.047	Seriola_dumerili
ENSACAG00000012141	POLR1A	99	63.769	ENSSLDG00000024095	polr1a	99	64.119	Seriola_lalandi_dorsalis
ENSACAG00000012141	POLR1A	67	92.683	ENSSARG00000003136	-	71	92.683	Sorex_araneus
ENSACAG00000012141	POLR1A	93	79.487	ENSSPUG00000004215	POLR1A	99	79.487	Sphenodon_punctatus
ENSACAG00000012141	POLR1A	63	71.676	ENSSPAG00000016341	polr1a	93	71.676	Stegastes_partitus
ENSACAG00000012141	POLR1A	84	70.871	ENSSSCG00000008226	POLR1A	99	70.871	Sus_scrofa
ENSACAG00000012141	POLR1A	99	70.456	ENSTGUG00000010704	POLR1A	100	70.456	Taeniopygia_guttata
ENSACAG00000012141	POLR1A	99	62.427	ENSTRUG00000002210	polr1a	99	62.777	Takifugu_rubripes
ENSACAG00000012141	POLR1A	99	58.300	ENSTNIG00000010116	polr1a	99	58.381	Tetraodon_nigroviridis
ENSACAG00000012141	POLR1A	70	86.726	ENSTBEG00000008646	POLR1A	70	86.726	Tupaia_belangeri
ENSACAG00000012141	POLR1A	99	66.010	ENSTTRG00000008597	POLR1A	99	66.358	Tursiops_truncatus
ENSACAG00000012141	POLR1A	69	69.379	ENSUAMG00000012158	-	94	70.752	Ursus_americanus
ENSACAG00000012141	POLR1A	99	67.857	ENSUMAG00000006700	POLR1A	97	72.093	Ursus_maritimus
ENSACAG00000012141	POLR1A	99	69.422	ENSVVUG00000001245	POLR1A	99	69.809	Vulpes_vulpes
ENSACAG00000012141	POLR1A	99	64.183	ENSXETG00000001952	polr1a	99	64.380	Xenopus_tropicalis
ENSACAG00000012141	POLR1A	99	64.074	ENSXMAG00000004032	polr1a	99	64.327	Xiphophorus_maculatus