EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000012240 (Gene tree)
Gene ID: 100553235
Gene Symbol: DDX39B
Alias: BAT1|D6S81E|UAP56
Full Name: DExD-box helicase 39B
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 10773 bases
Position: chr2:194066457-194077229
Accession: 100553235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000012097	ResIII	PF04851.15	1.3e-07	1	1
ENSACAP00000012097	DEAD	PF00270.29	5.2e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000012342	DDX39B-201	1513	XM_003217986	ENSACAP00000012097	429 (aa)	XP_003218034	G1KM58

Gene Model

Click here to download ENSACAG00000012240's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03013	RNA transport	KEGG
acs03015	mRNA surveillance pathway	KEGG
acs03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000012240's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000012240	DDX39B	72	33.439	ENSACAG00000005524	EIF4A1	90	33.439
ENSACAG00000012240	DDX39B	86	38.814	ENSACAG00000007682	EIF4A2	90	38.814
ENSACAG00000012240	DDX39B	100	89.977	ENSACAG00000010756	DDX39A	100	90.210
ENSACAG00000012240	DDX39B	85	37.705	ENSACAG00000014384	EIF4A3	85	37.466
ENSACAG00000012240	DDX39B	93	36.070	ENSACAG00000017134	DDX6	79	36.061
ENSACAG00000012240	DDX39B	87	36.364	ENSACAG00000006235	DDX20	50	36.364
ENSACAG00000012240	DDX39B	91	30.000	ENSACAG00000000173	DDX25	80	30.000
ENSACAG00000012240	DDX39B	88	32.804	ENSACAG00000010648	DDX47	84	32.804

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000012240	DDX39B	100	97.203	ENSG00000198563	DDX39B	100	97.203	Homo_sapiens
ENSACAG00000012240	DDX39B	100	96.970	ENSAMEG00000009508	DDX39B	99	96.970	Ailuropoda_melanoleuca
ENSACAG00000012240	DDX39B	99	92.991	ENSACIG00000004534	ddx39b	98	93.224	Amphilophus_citrinellus
ENSACAG00000012240	DDX39B	100	92.379	ENSATEG00000012366	ddx39b	100	92.379	Anabas_testudineus
ENSACAG00000012240	DDX39B	100	97.203	ENSANAG00000030372	DDX39B	100	97.203	Aotus_nancymaae
ENSACAG00000012240	DDX39B	99	90.575	ENSACLG00000018759	ddx39b	99	90.805	Astatotilapia_calliptera
ENSACAG00000012240	DDX39B	100	91.533	ENSAMXG00000017837	ddx39b	100	91.533	Astyanax_mexicanus
ENSACAG00000012240	DDX39B	100	97.436	ENSBTAG00000014490	DDX39B	100	97.436	Bos_taurus
ENSACAG00000012240	DDX39B	100	97.203	ENSCJAG00000003152	DDX39B	100	97.203	Callithrix_jacchus
ENSACAG00000012240	DDX39B	100	96.970	ENSCAFG00000000509	DDX39B	100	99.035	Canis_familiaris
ENSACAG00000012240	DDX39B	100	96.970	ENSCAFG00020020530	DDX39B	100	96.970	Canis_lupus_dingo
ENSACAG00000012240	DDX39B	100	97.436	ENSCHIG00000004579	DDX39B	100	97.436	Capra_hircus
ENSACAG00000012240	DDX39B	100	83.916	ENSTSYG00000029741	-	91	85.238	Carlito_syrichta
ENSACAG00000012240	DDX39B	100	97.203	ENSTSYG00000010226	-	100	97.203	Carlito_syrichta
ENSACAG00000012240	DDX39B	100	96.970	ENSCAPG00000010066	DDX39B	100	96.970	Cavia_aperea
ENSACAG00000012240	DDX39B	100	96.970	ENSCPOG00000002335	DDX39B	100	96.970	Cavia_porcellus
ENSACAG00000012240	DDX39B	100	97.203	ENSCCAG00000027897	DDX39B	100	97.203	Cebus_capucinus
ENSACAG00000012240	DDX39B	99	87.559	ENSCATG00000043709	DDX39B	99	87.559	Cercocebus_atys
ENSACAG00000012240	DDX39B	100	96.970	ENSCLAG00000014555	DDX39B	100	96.970	Chinchilla_lanigera
ENSACAG00000012240	DDX39B	99	96.948	ENSCSAG00000008517	DDX39B	100	96.948	Chlorocebus_sabaeus
ENSACAG00000012240	DDX39B	64	99.270	ENSCPBG00000014671	-	100	99.270	Chrysemys_picta_bellii
ENSACAG00000012240	DDX39B	100	97.203	ENSCANG00000041217	DDX39B	100	97.203	Colobus_angolensis_palliatus
ENSACAG00000012240	DDX39B	83	83.565	ENSCGRG00001021916	-	89	83.565	Cricetulus_griseus_chok1gshd
ENSACAG00000012240	DDX39B	57	95.510	ENSCGRG00001017315	-	95	94.660	Cricetulus_griseus_chok1gshd
ENSACAG00000012240	DDX39B	57	95.510	ENSCGRG00000012479	-	76	95.510	Cricetulus_griseus_crigri
ENSACAG00000012240	DDX39B	100	92.202	ENSDARG00000036069	ddx39b	100	92.431	Danio_rerio
ENSACAG00000012240	DDX39B	100	97.203	ENSDNOG00000010215	DDX39B	100	97.203	Dasypus_novemcinctus
ENSACAG00000012240	DDX39B	87	96.800	ENSDORG00000004985	Ddx39b	100	96.800	Dipodomys_ordii
ENSACAG00000012240	DDX39B	87	84.533	ENSETEG00000009649	DDX39B	87	84.533	Echinops_telfairi
ENSACAG00000012240	DDX39B	100	97.203	ENSEASG00005017156	DDX39B	100	97.203	Equus_asinus_asinus
ENSACAG00000012240	DDX39B	100	97.203	ENSECAG00000007750	DDX39B	100	97.203	Equus_caballus
ENSACAG00000012240	DDX39B	100	92.343	ENSELUG00000017904	ddx39b	100	92.343	Esox_lucius
ENSACAG00000012240	DDX39B	100	96.970	ENSFCAG00000004497	DDX39B	100	96.970	Felis_catus
ENSACAG00000012240	DDX39B	100	96.970	ENSFDAG00000011074	DDX39B	100	96.970	Fukomys_damarensis
ENSACAG00000012240	DDX39B	74	99.369	ENSGAGG00000001300	-	80	99.369	Gopherus_agassizii
ENSACAG00000012240	DDX39B	100	97.203	ENSGGOG00000005989	DDX39B	100	97.203	Gorilla_gorilla
ENSACAG00000012240	DDX39B	100	96.970	ENSHGLG00000019248	DDX39B	100	96.970	Heterocephalus_glaber_female
ENSACAG00000012240	DDX39B	100	96.970	ENSHGLG00100011850	DDX39B	100	96.970	Heterocephalus_glaber_male
ENSACAG00000012240	DDX39B	100	90.847	ENSIPUG00000015733	DDX39B	94	91.533	Ictalurus_punctatus
ENSACAG00000012240	DDX39B	100	96.737	ENSSTOG00000012838	DDX39B	100	96.737	Ictidomys_tridecemlineatus
ENSACAG00000012240	DDX39B	100	96.503	ENSJJAG00000005660	-	100	96.503	Jaculus_jaculus
ENSACAG00000012240	DDX39B	70	76.000	ENSLBEG00000017177	-	85	75.102	Labrus_bergylta
ENSACAG00000012240	DDX39B	99	78.066	ENSLBEG00000012254	ddx39b	99	78.066	Labrus_bergylta
ENSACAG00000012240	DDX39B	100	88.736	ENSLACG00000002110	DDX39B	100	88.736	Latimeria_chalumnae
ENSACAG00000012240	DDX39B	100	96.970	ENSLAFG00000014202	DDX39B	100	96.970	Loxodonta_africana
ENSACAG00000012240	DDX39B	100	97.203	ENSMFAG00000034233	DDX39B	100	97.203	Macaca_fascicularis
ENSACAG00000012240	DDX39B	100	97.203	ENSMMUG00000008839	DDX39B	100	97.203	Macaca_mulatta
ENSACAG00000012240	DDX39B	100	97.203	ENSMNEG00000041059	DDX39B	100	97.203	Macaca_nemestrina
ENSACAG00000012240	DDX39B	100	97.203	ENSMLEG00000043791	DDX39B	100	97.203	Mandrillus_leucophaeus
ENSACAG00000012240	DDX39B	99	90.575	ENSMZEG00005017654	ddx39b	99	90.805	Maylandia_zebra
ENSACAG00000012240	DDX39B	100	96.737	ENSMAUG00000008059	Ddx39b	100	96.737	Mesocricetus_auratus
ENSACAG00000012240	DDX39B	100	97.203	ENSMICG00000017349	DDX39B	100	97.203	Microcebus_murinus
ENSACAG00000012240	DDX39B	100	96.970	ENSMOCG00000011169	Ddx39b	100	96.970	Microtus_ochrogaster
ENSACAG00000012240	DDX39B	88	96.817	ENSMODG00000015791	DDX39B	88	96.817	Monodelphis_domestica
ENSACAG00000012240	DDX39B	100	96.970	ENSMUSG00000019432	Ddx39b	100	99.324	Mus_musculus
ENSACAG00000012240	DDX39B	100	96.970	MGP_PahariEiJ_G0020513	Ddx39b	100	99.324	Mus_pahari
ENSACAG00000012240	DDX39B	100	96.970	MGP_SPRETEiJ_G0022424	Ddx39b	100	96.970	Mus_spretus
ENSACAG00000012240	DDX39B	100	96.970	ENSMPUG00000011407	DDX39B	100	96.970	Mustela_putorius_furo
ENSACAG00000012240	DDX39B	73	99.038	ENSMLUG00000001681	DDX39B	100	99.038	Myotis_lucifugus
ENSACAG00000012240	DDX39B	100	97.203	ENSNGAG00000022948	Ddx39b	100	97.203	Nannospalax_galili
ENSACAG00000012240	DDX39B	100	73.193	ENSNLEG00000006094	DDX39B	100	73.193	Nomascus_leucogenys
ENSACAG00000012240	DDX39B	86	99.103	ENSMEUG00000008264	DDX39B	86	99.103	Notamacropus_eugenii
ENSACAG00000012240	DDX39B	100	96.970	ENSOPRG00000011923	DDX39B	100	96.970	Ochotona_princeps
ENSACAG00000012240	DDX39B	100	97.203	ENSODEG00000018083	DDX39B	100	97.203	Octodon_degus
ENSACAG00000012240	DDX39B	100	91.917	ENSONIG00000004740	ddx39b	100	91.917	Oreochromis_niloticus
ENSACAG00000012240	DDX39B	55	94.937	ENSOANG00000008361	DDX39B	95	94.937	Ornithorhynchus_anatinus
ENSACAG00000012240	DDX39B	100	93.468	ENSOCUG00000024126	DDX39B	100	93.468	Oryctolagus_cuniculus
ENSACAG00000012240	DDX39B	100	95.814	ENSOGAG00000028850	-	100	95.814	Otolemur_garnettii
ENSACAG00000012240	DDX39B	84	90.933	ENSOGAG00000009067	-	100	97.538	Otolemur_garnettii
ENSACAG00000012240	DDX39B	100	97.436	ENSOARG00000008787	DDX39B	98	97.436	Ovis_aries
ENSACAG00000012240	DDX39B	100	97.203	ENSPPAG00000043072	DDX39B	100	97.203	Pan_paniscus
ENSACAG00000012240	DDX39B	100	96.970	ENSPPRG00000001913	DDX39B	100	96.970	Panthera_pardus
ENSACAG00000012240	DDX39B	100	96.037	ENSPTIG00000017669	DDX39B	100	96.037	Panthera_tigris_altaica
ENSACAG00000012240	DDX39B	100	97.203	ENSPTRG00000032509	DDX39B	100	97.203	Pan_troglodytes
ENSACAG00000012240	DDX39B	100	97.203	ENSPANG00000018609	DDX39B	100	97.203	Papio_anubis
ENSACAG00000012240	DDX39B	100	90.183	ENSPKIG00000011324	ddx39b	100	91.096	Paramormyrops_kingsleyae
ENSACAG00000012240	DDX39B	100	96.737	ENSPEMG00000016905	Ddx39b	100	96.737	Peromyscus_maniculatus_bairdii
ENSACAG00000012240	DDX39B	100	97.203	ENSPCIG00000017572	DDX39B	100	97.203	Phascolarctos_cinereus
ENSACAG00000012240	DDX39B	100	97.203	ENSPPYG00000016433	DDX39B	100	97.203	Pongo_abelii
ENSACAG00000012240	DDX39B	66	98.947	ENSPCAG00000003484	DDX39B	100	98.947	Procavia_capensis
ENSACAG00000012240	DDX39B	100	97.203	ENSPCOG00000018656	DDX39B	100	97.203	Propithecus_coquereli
ENSACAG00000012240	DDX39B	100	96.970	ENSPVAG00000004653	DDX39B	100	96.970	Pteropus_vampyrus
ENSACAG00000012240	DDX39B	98	82.118	ENSPNYG00000010382	ddx39b	98	82.477	Pundamilia_nyererei
ENSACAG00000012240	DDX39B	100	91.762	ENSPNAG00000026926	ddx39b	100	91.762	Pygocentrus_nattereri
ENSACAG00000012240	DDX39B	100	96.970	ENSRNOG00000000841	Ddx39b	100	96.970	Rattus_norvegicus
ENSACAG00000012240	DDX39B	100	86.946	ENSRBIG00000031309	DDX39B	100	86.946	Rhinopithecus_bieti
ENSACAG00000012240	DDX39B	100	97.203	ENSRROG00000039517	DDX39B	100	97.203	Rhinopithecus_roxellana
ENSACAG00000012240	DDX39B	100	86.946	ENSSBOG00000035513	-	100	86.946	Saimiri_boliviensis_boliviensis
ENSACAG00000012240	DDX39B	100	97.203	ENSSHAG00000003209	DDX39B	100	97.203	Sarcophilus_harrisii
ENSACAG00000012240	DDX39B	100	90.639	ENSSFOG00015016107	ddx39b	100	91.096	Scleropages_formosus
ENSACAG00000012240	DDX39B	100	92.610	ENSSDUG00000011557	ddx39b	100	93.072	Seriola_dumerili
ENSACAG00000012240	DDX39B	100	92.379	ENSSLDG00000015763	ddx39b	100	92.841	Seriola_lalandi_dorsalis
ENSACAG00000012240	DDX39B	87	85.067	ENSSARG00000005245	DDX39B	100	85.067	Sorex_araneus
ENSACAG00000012240	DDX39B	100	98.834	ENSSPUG00000012805	DDX39B	100	98.834	Sphenodon_punctatus
ENSACAG00000012240	DDX39B	100	97.203	ENSSSCG00000001400	DDX39B	100	99.135	Sus_scrofa
ENSACAG00000012240	DDX39B	100	74.359	ENSTBEG00000003721	DDX39B	100	74.359	Tupaia_belangeri
ENSACAG00000012240	DDX39B	100	88.710	ENSTTRG00000014074	DDX39B	100	88.710	Tursiops_truncatus
ENSACAG00000012240	DDX39B	100	84.223	ENSUAMG00000027335	DDX39B	100	84.223	Ursus_americanus
ENSACAG00000012240	DDX39B	100	88.112	ENSUMAG00000015124	DDX39B	100	88.112	Ursus_maritimus
ENSACAG00000012240	DDX39B	62	92.035	ENSVPAG00000009167	-	74	92.035	Vicugna_pacos
ENSACAG00000012240	DDX39B	100	96.970	ENSVVUG00000019518	DDX39B	99	96.970	Vulpes_vulpes
ENSACAG00000012240	DDX39B	100	84.223	ENSXETG00000002498	ddx39b	99	84.223	Xenopus_tropicalis