EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000012871 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 17484 bases
Position: chrGL343725.1:237232-254715
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000012682	PPR	PF01535.20	2.5e-17	1	2
ENSACAP00000012682	PPR	PF01535.20	2.5e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000012938	-	3689	-	ENSACAP00000012682	751 (aa)	-	H9GJE9

Gene Model

Click here to download ENSACAG00000012871's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000012871's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000012871	-	98	54.072	ENSG00000248919	ATP5MF-PTCD1	99	54.206	Homo_sapiens
ENSACAG00000012871	-	92	54.765	ENSG00000106246	PTCD1	99	54.908	Homo_sapiens
ENSACAG00000012871	-	76	46.141	ENSAPOG00000010679	ptcd1	88	46.141	Acanthochromis_polyacanthus
ENSACAG00000012871	-	97	56.225	ENSAMEG00000006224	-	97	56.225	Ailuropoda_melanoleuca
ENSACAG00000012871	-	83	48.265	ENSACIG00000017861	ptcd1	90	48.265	Amphilophus_citrinellus
ENSACAG00000012871	-	75	47.727	ENSAOCG00000022617	ptcd1	83	47.727	Amphiprion_ocellaris
ENSACAG00000012871	-	83	46.349	ENSAOCG00000020741	-	86	46.349	Amphiprion_ocellaris
ENSACAG00000012871	-	83	46.497	ENSAPEG00000022632	ptcd1	86	46.497	Amphiprion_percula
ENSACAG00000012871	-	83	47.702	ENSATEG00000007016	ptcd1	84	48.604	Anabas_testudineus
ENSACAG00000012871	-	81	63.547	ENSAPLG00000006862	-	96	63.533	Anas_platyrhynchos
ENSACAG00000012871	-	91	55.043	ENSANAG00000035790	-	99	55.043	Aotus_nancymaae
ENSACAG00000012871	-	78	50.083	ENSACLG00000002824	ptcd1	81	50.083	Astatotilapia_calliptera
ENSACAG00000012871	-	80	50.157	ENSAMXG00000037292	ptcd1	88	50.157	Astyanax_mexicanus
ENSACAG00000012871	-	99	53.333	ENSBTAG00000020440	-	94	53.333	Bos_taurus
ENSACAG00000012871	-	93	54.278	ENSCJAG00000015815	-	100	54.278	Callithrix_jacchus
ENSACAG00000012871	-	96	56.199	ENSCAFG00000015055	-	97	56.199	Canis_familiaris
ENSACAG00000012871	-	91	56.897	ENSCAFG00020014480	-	90	56.897	Canis_lupus_dingo
ENSACAG00000012871	-	93	55.263	ENSCHIG00000027000	-	99	55.494	Capra_hircus
ENSACAG00000012871	-	92	55.887	ENSTSYG00000029495	-	99	55.887	Carlito_syrichta
ENSACAG00000012871	-	86	56.402	ENSCAPG00000014660	-	97	56.402	Cavia_aperea
ENSACAG00000012871	-	92	54.789	ENSCPOG00000001780	-	98	54.789	Cavia_porcellus
ENSACAG00000012871	-	93	53.727	ENSCCAG00000034025	-	100	54.149	Cebus_capucinus
ENSACAG00000012871	-	92	54.922	ENSCATG00000040859	-	99	55.064	Cercocebus_atys
ENSACAG00000012871	-	92	55.807	ENSCLAG00000006354	-	100	55.292	Chinchilla_lanigera
ENSACAG00000012871	-	85	55.008	ENSCSAG00000017794	-	95	55.008	Chlorocebus_sabaeus
ENSACAG00000012871	-	86	62.963	ENSCPBG00000020866	-	91	62.963	Chrysemys_picta_bellii
ENSACAG00000012871	-	57	40.376	ENSCING00000007717	-	73	41.121	Ciona_intestinalis
ENSACAG00000012871	-	93	54.725	ENSCANG00000023441	-	99	54.725	Colobus_angolensis_palliatus
ENSACAG00000012871	-	92	55.807	ENSCGRG00001023686	Ptcd1	99	55.807	Cricetulus_griseus_chok1gshd
ENSACAG00000012871	-	91	55.352	ENSCGRG00000015031	Ptcd1	98	55.352	Cricetulus_griseus_crigri
ENSACAG00000012871	-	83	44.599	ENSCSEG00000002378	ptcd1	86	45.062	Cynoglossus_semilaevis
ENSACAG00000012871	-	80	49.342	ENSCVAG00000003621	ptcd1	89	48.534	Cyprinodon_variegatus
ENSACAG00000012871	-	83	47.806	ENSCVAG00000015826	ptcd1	88	47.806	Cyprinodon_variegatus
ENSACAG00000012871	-	82	50.789	ENSDARG00000076176	ptcd1	90	50.789	Danio_rerio
ENSACAG00000012871	-	93	53.760	ENSDNOG00000009957	-	99	54.357	Dasypus_novemcinctus
ENSACAG00000012871	-	80	61.401	ENSDORG00000000740	Ptcd1	89	60.835	Dipodomys_ordii
ENSACAG00000012871	-	81	39.489	ENSEBUG00000014515	ptcd1	99	40.336	Eptatretus_burgeri
ENSACAG00000012871	-	93	55.402	ENSEASG00005002480	-	99	55.817	Equus_asinus_asinus
ENSACAG00000012871	-	93	55.216	ENSECAG00000016617	-	99	55.633	Equus_caballus
ENSACAG00000012871	-	81	43.634	ENSELUG00000016517	ptcd1	85	43.634	Esox_lucius
ENSACAG00000012871	-	93	55.292	ENSFCAG00000015069	-	100	55.494	Felis_catus
ENSACAG00000012871	-	81	62.381	ENSFALG00000013803	-	90	60.976	Ficedula_albicollis
ENSACAG00000012871	-	93	54.848	ENSFDAG00000006393	-	100	54.924	Fukomys_damarensis
ENSACAG00000012871	-	69	48.577	ENSFHEG00000012491	ptcd1	87	48.577	Fundulus_heteroclitus
ENSACAG00000012871	-	80	45.514	ENSGMOG00000007639	ptcd1	94	45.514	Gadus_morhua
ENSACAG00000012871	-	82	63.307	ENSGALG00000004711	-	89	63.199	Gallus_gallus
ENSACAG00000012871	-	78	48.000	ENSGAFG00000013175	ptcd1	83	48.000	Gambusia_affinis
ENSACAG00000012871	-	82	46.417	ENSGACG00000016607	ptcd1	93	46.948	Gasterosteus_aculeatus
ENSACAG00000012871	-	80	64.404	ENSGAGG00000021832	-	91	64.570	Gopherus_agassizii
ENSACAG00000012871	-	92	54.908	ENSGGOG00000015123	-	99	55.050	Gorilla_gorilla
ENSACAG00000012871	-	77	50.169	ENSHBUG00000018275	ptcd1	80	50.169	Haplochromis_burtoni
ENSACAG00000012871	-	93	55.494	ENSHGLG00000017621	-	100	55.633	Heterocephalus_glaber_female
ENSACAG00000012871	-	93	55.494	ENSHGLG00100007218	-	100	55.633	Heterocephalus_glaber_male
ENSACAG00000012871	-	85	44.136	ENSHCOG00000010784	ptcd1	89	43.692	Hippocampus_comes
ENSACAG00000012871	-	92	54.839	ENSSTOG00000001682	-	99	54.839	Ictidomys_tridecemlineatus
ENSACAG00000012871	-	92	56.143	ENSJJAG00000000319	Ptcd1	98	56.348	Jaculus_jaculus
ENSACAG00000012871	-	77	47.530	ENSKMAG00000008708	ptcd1	80	48.211	Kryptolebias_marmoratus
ENSACAG00000012871	-	79	48.033	ENSLBEG00000008061	ptcd1	83	48.689	Labrus_bergylta
ENSACAG00000012871	-	85	58.243	ENSLACG00000011172	ptcd1	91	58.398	Latimeria_chalumnae
ENSACAG00000012871	-	80	55.678	ENSLOCG00000004833	ptcd1	95	55.049	Lepisosteus_oculatus
ENSACAG00000012871	-	93	54.028	ENSLAFG00000002588	-	97	54.902	Loxodonta_africana
ENSACAG00000012871	-	92	55.064	ENSMFAG00000041324	-	99	55.064	Macaca_fascicularis
ENSACAG00000012871	-	98	54.485	ENSMMUG00000030408	-	99	55.207	Macaca_mulatta
ENSACAG00000012871	-	92	55.064	ENSMNEG00000043786	-	99	55.064	Macaca_nemestrina
ENSACAG00000012871	-	92	55.109	ENSMLEG00000031179	-	98	42.368	Mandrillus_leucophaeus
ENSACAG00000012871	-	78	49.172	ENSMAMG00000007623	ptcd1	81	49.172	Mastacembelus_armatus
ENSACAG00000012871	-	78	50.083	ENSMZEG00005012722	ptcd1	81	50.083	Maylandia_zebra
ENSACAG00000012871	-	99	56.827	ENSMGAG00000004211	-	99	56.827	Meleagris_gallopavo
ENSACAG00000012871	-	92	54.789	ENSMICG00000017428	-	98	55.070	Microcebus_murinus
ENSACAG00000012871	-	79	47.913	ENSMMOG00000020243	ptcd1	90	48.167	Mola_mola
ENSACAG00000012871	-	86	55.539	ENSMODG00000001350	-	90	55.539	Monodelphis_domestica
ENSACAG00000012871	-	77	49.493	ENSMALG00000018442	ptcd1	80	49.493	Monopterus_albus
ENSACAG00000012871	-	92	53.901	MGP_CAROLIEiJ_G0028011	Ptcd1	99	53.901	Mus_caroli
ENSACAG00000012871	-	92	54.119	ENSMUSG00000029624	Ptcd1	99	54.161	Mus_musculus
ENSACAG00000012871	-	92	54.830	MGP_PahariEiJ_G0024580	Ptcd1	99	54.830	Mus_pahari
ENSACAG00000012871	-	92	54.326	MGP_SPRETEiJ_G0029012	Ptcd1	99	54.326	Mus_spretus
ENSACAG00000012871	-	91	55.128	ENSMPUG00000016518	-	98	56.017	Mustela_putorius_furo
ENSACAG00000012871	-	99	55.150	ENSMLUG00000010994	-	100	54.910	Myotis_lucifugus
ENSACAG00000012871	-	78	49.416	ENSNBRG00000010079	ptcd1	84	49.416	Neolamprologus_brichardi
ENSACAG00000012871	-	72	59.963	ENSNLEG00000011060	-	91	59.963	Nomascus_leucogenys
ENSACAG00000012871	-	81	58.387	ENSMEUG00000006930	-	88	58.387	Notamacropus_eugenii
ENSACAG00000012871	-	92	56.573	ENSOPRG00000013647	-	88	56.573	Ochotona_princeps
ENSACAG00000012871	-	77	48.148	ENSONIG00000003168	ptcd1	94	48.148	Oreochromis_niloticus
ENSACAG00000012871	-	79	51.030	ENSOANG00000007728	-	84	49.924	Ornithorhynchus_anatinus
ENSACAG00000012871	-	81	58.738	ENSOCUG00000010584	-	90	57.011	Oryctolagus_cuniculus
ENSACAG00000012871	-	78	49.322	ENSORLG00000009275	ptcd1	84	49.322	Oryzias_latipes
ENSACAG00000012871	-	78	48.900	ENSORLG00020000988	ptcd1	84	48.900	Oryzias_latipes_hni
ENSACAG00000012871	-	78	48.644	ENSORLG00015010557	ptcd1	84	48.644	Oryzias_latipes_hsok
ENSACAG00000012871	-	79	48.505	ENSOMEG00000020627	ptcd1	87	48.505	Oryzias_melastigma
ENSACAG00000012871	-	92	54.852	ENSOGAG00000010877	-	99	54.993	Otolemur_garnettii
ENSACAG00000012871	-	93	52.786	ENSOARG00000018676	-	100	52.786	Ovis_aries
ENSACAG00000012871	-	92	54.196	ENSPPAG00000036024	-	99	54.481	Pan_paniscus
ENSACAG00000012871	-	93	55.587	ENSPPRG00000003478	-	100	55.587	Panthera_pardus
ENSACAG00000012871	-	92	54.054	ENSPTRG00000019452	-	99	54.339	Pan_troglodytes
ENSACAG00000012871	-	92	54.779	ENSPANG00000016730	-	99	54.922	Papio_anubis
ENSACAG00000012871	-	84	53.178	ENSPKIG00000014215	ptcd1	93	53.178	Paramormyrops_kingsleyae
ENSACAG00000012871	-	78	64.636	ENSPSIG00000011184	-	99	64.805	Pelodiscus_sinensis
ENSACAG00000012871	-	68	38.095	ENSPMAG00000009667	ptcd1	100	38.095	Petromyzon_marinus
ENSACAG00000012871	-	82	57.165	ENSPCIG00000024778	-	90	55.952	Phascolarctos_cinereus
ENSACAG00000012871	-	80	46.569	ENSPFOG00000004458	ptcd1	87	45.800	Poecilia_formosa
ENSACAG00000012871	-	80	46.569	ENSPLAG00000011051	ptcd1	85	46.515	Poecilia_latipinna
ENSACAG00000012871	-	80	46.732	ENSPMEG00000020547	ptcd1	87	45.899	Poecilia_mexicana
ENSACAG00000012871	-	77	48.217	ENSPREG00000000059	ptcd1	82	48.217	Poecilia_reticulata
ENSACAG00000012871	-	87	56.561	ENSPPYG00000017377	-	99	56.561	Pongo_abelii
ENSACAG00000012871	-	73	59.864	ENSPCAG00000001852	-	86	59.864	Procavia_capensis
ENSACAG00000012871	-	92	54.213	ENSPCOG00000018596	-	99	55.446	Propithecus_coquereli
ENSACAG00000012871	-	63	73.000	ENSPVAG00000007529	-	73	73.000	Pteropus_vampyrus
ENSACAG00000012871	-	77	50.339	ENSPNYG00000019993	ptcd1	80	50.339	Pundamilia_nyererei
ENSACAG00000012871	-	81	51.768	ENSPNAG00000014931	ptcd1	90	51.929	Pygocentrus_nattereri
ENSACAG00000012871	-	91	54.899	ENSRNOG00000000987	Ptcd1	97	54.899	Rattus_norvegicus
ENSACAG00000012871	-	92	55.777	ENSRBIG00000043393	-	99	55.777	Rhinopithecus_bieti
ENSACAG00000012871	-	92	55.635	ENSRROG00000036420	-	99	55.635	Rhinopithecus_roxellana
ENSACAG00000012871	-	93	54.916	ENSSBOG00000024114	-	100	54.916	Saimiri_boliviensis_boliviensis
ENSACAG00000012871	-	89	53.286	ENSSHAG00000011376	-	96	56.698	Sarcophilus_harrisii
ENSACAG00000012871	-	80	55.183	ENSSFOG00015007909	ptcd1	83	55.821	Scleropages_formosus
ENSACAG00000012871	-	78	48.990	ENSSMAG00000000218	ptcd1	91	49.327	Scophthalmus_maximus
ENSACAG00000012871	-	83	47.799	ENSSDUG00000015671	ptcd1	89	47.799	Seriola_dumerili
ENSACAG00000012871	-	80	48.377	ENSSLDG00000014261	ptcd1	86	48.377	Seriola_lalandi_dorsalis
ENSACAG00000012871	-	88	60.545	ENSSPUG00000003540	-	92	61.836	Sphenodon_punctatus
ENSACAG00000012871	-	80	48.558	ENSSPAG00000011049	ptcd1	84	48.558	Stegastes_partitus
ENSACAG00000012871	-	86	56.904	ENSSSCG00000007622	-	99	56.716	Sus_scrofa
ENSACAG00000012871	-	81	63.072	ENSTGUG00000007563	-	99	63.235	Taeniopygia_guttata
ENSACAG00000012871	-	79	46.353	ENSTRUG00000013471	ptcd1	82	46.353	Takifugu_rubripes
ENSACAG00000012871	-	80	47.525	ENSTNIG00000008271	ptcd1	85	47.525	Tetraodon_nigroviridis
ENSACAG00000012871	-	86	57.903	ENSTBEG00000011021	-	92	57.903	Tupaia_belangeri
ENSACAG00000012871	-	93	53.771	ENSTTRG00000003006	-	100	53.771	Tursiops_truncatus
ENSACAG00000012871	-	92	54.789	ENSUAMG00000008049	-	99	55.493	Ursus_americanus
ENSACAG00000012871	-	91	56.250	ENSVVUG00000008836	-	99	56.250	Vulpes_vulpes
ENSACAG00000012871	-	81	54.864	ENSXETG00000009891	ptcd1	90	54.834	Xenopus_tropicalis
ENSACAG00000012871	-	78	48.054	ENSXMAG00000015540	ptcd1	82	48.054	Xiphophorus_maculatus