EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000012999 (Gene tree)
Gene ID: 100560261
Gene Symbol: PRDM5
Alias: PFM2
Full Name: PR/SET domain 5
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 96953 bases
Position: chr5:139479766-139576718
Accession: 100560261
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000012901	zf-C2H2	PF00096.26	1.9e-70	1	12
ENSACAP00000012901	zf-C2H2	PF00096.26	1.9e-70	2	12
ENSACAP00000012901	zf-C2H2	PF00096.26	1.9e-70	3	12
ENSACAP00000012901	zf-C2H2	PF00096.26	1.9e-70	4	12
ENSACAP00000012901	zf-C2H2	PF00096.26	1.9e-70	5	12
ENSACAP00000012901	zf-C2H2	PF00096.26	1.9e-70	6	12
ENSACAP00000012901	zf-C2H2	PF00096.26	1.9e-70	7	12
ENSACAP00000012901	zf-C2H2	PF00096.26	1.9e-70	8	12
ENSACAP00000012901	zf-C2H2	PF00096.26	1.9e-70	9	12
ENSACAP00000012901	zf-C2H2	PF00096.26	1.9e-70	10	12
ENSACAP00000012901	zf-C2H2	PF00096.26	1.9e-70	11	12
ENSACAP00000012901	zf-C2H2	PF00096.26	1.9e-70	12	12
ENSACAP00000012901	zf-met	PF12874.7	3.5e-30	1	5
ENSACAP00000012901	zf-met	PF12874.7	3.5e-30	2	5
ENSACAP00000012901	zf-met	PF12874.7	3.5e-30	3	5
ENSACAP00000012901	zf-met	PF12874.7	3.5e-30	4	5
ENSACAP00000012901	zf-met	PF12874.7	3.5e-30	5	5
ENSACAP00000012901	zf-C2H2_jaz	PF12171.8	1.3e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000013159	PRDM5-201	2116	XM_003221774	ENSACAP00000012901	630 (aa)	XP_003221822	G1KNA6

Gene Model

Click here to download ENSACAG00000012999's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000012999's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000012999	PRDM5	79	40.780	ENSACAG00000000082	-	99	39.159
ENSACAG00000012999	PRDM5	76	31.111	ENSACAG00000007108	-	100	31.111
ENSACAG00000012999	PRDM5	75	34.483	ENSACAG00000015141	-	96	33.945
ENSACAG00000012999	PRDM5	73	33.864	ENSACAG00000026810	-	99	33.864
ENSACAG00000012999	PRDM5	73	36.790	ENSACAG00000024956	-	78	36.790
ENSACAG00000012999	PRDM5	79	37.415	ENSACAG00000013623	-	100	37.415
ENSACAG00000012999	PRDM5	77	31.092	ENSACAG00000011023	ZNF628	60	37.175
ENSACAG00000012999	PRDM5	78	39.792	ENSACAG00000022421	-	100	40.840
ENSACAG00000012999	PRDM5	75	31.092	ENSACAG00000003465	ZNF574	72	31.662
ENSACAG00000012999	PRDM5	79	35.589	ENSACAG00000022789	-	89	35.795

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000012999	PRDM5	100	79.683	ENSG00000138738	PRDM5	100	79.683	Homo_sapiens
ENSACAG00000012999	PRDM5	100	77.021	ENSAPOG00000023220	prdm5	100	76.704	Acanthochromis_polyacanthus
ENSACAG00000012999	PRDM5	91	73.137	ENSAMEG00000003050	PRDM5	100	73.958	Ailuropoda_melanoleuca
ENSACAG00000012999	PRDM5	100	76.387	ENSACIG00000000406	prdm5	100	76.070	Amphilophus_citrinellus
ENSACAG00000012999	PRDM5	100	78.130	ENSAOCG00000014806	prdm5	100	77.813	Amphiprion_ocellaris
ENSACAG00000012999	PRDM5	100	69.172	ENSAPEG00000016846	prdm5	100	70.092	Amphiprion_percula
ENSACAG00000012999	PRDM5	100	79.905	ENSATEG00000013829	prdm5	99	79.873	Anabas_testudineus
ENSACAG00000012999	PRDM5	95	89.535	ENSAPLG00000013828	PRDM5	100	89.535	Anas_platyrhynchos
ENSACAG00000012999	PRDM5	100	90.190	ENSANAG00000027411	PRDM5	100	90.190	Aotus_nancymaae
ENSACAG00000012999	PRDM5	100	77.655	ENSACLG00000017996	prdm5	100	77.338	Astatotilapia_calliptera
ENSACAG00000012999	PRDM5	84	83.083	ENSAMXG00000041864	prdm5	98	83.083	Astyanax_mexicanus
ENSACAG00000012999	PRDM5	100	78.730	ENSBTAG00000012111	PRDM5	100	78.730	Bos_taurus
ENSACAG00000012999	PRDM5	100	89.873	ENSCJAG00000003133	PRDM5	100	89.873	Callithrix_jacchus
ENSACAG00000012999	PRDM5	92	71.157	ENSCAFG00000004179	PRDM5	99	71.157	Canis_familiaris
ENSACAG00000012999	PRDM5	100	79.048	ENSCAFG00020017685	PRDM5	100	79.048	Canis_lupus_dingo
ENSACAG00000012999	PRDM5	100	78.571	ENSCHIG00000018772	PRDM5	100	78.571	Capra_hircus
ENSACAG00000012999	PRDM5	95	78.716	ENSTSYG00000009630	PRDM5	95	78.716	Carlito_syrichta
ENSACAG00000012999	PRDM5	95	72.712	ENSCAPG00000015217	PRDM5	93	89.333	Cavia_aperea
ENSACAG00000012999	PRDM5	95	89.557	ENSCPOG00000012883	PRDM5	100	89.557	Cavia_porcellus
ENSACAG00000012999	PRDM5	100	90.190	ENSCCAG00000023157	PRDM5	100	90.190	Cebus_capucinus
ENSACAG00000012999	PRDM5	100	90.190	ENSCATG00000042510	PRDM5	100	90.190	Cercocebus_atys
ENSACAG00000012999	PRDM5	95	89.241	ENSCLAG00000005392	PRDM5	100	89.241	Chinchilla_lanigera
ENSACAG00000012999	PRDM5	100	76.508	ENSCSAG00000003729	PRDM5	100	76.508	Chlorocebus_sabaeus
ENSACAG00000012999	PRDM5	99	79.371	ENSCHOG00000007801	PRDM5	91	79.371	Choloepus_hoffmanni
ENSACAG00000012999	PRDM5	100	89.515	ENSCPBG00000024735	PRDM5	100	89.515	Chrysemys_picta_bellii
ENSACAG00000012999	PRDM5	100	90.190	ENSCANG00000036807	PRDM5	100	90.190	Colobus_angolensis_palliatus
ENSACAG00000012999	PRDM5	100	90.667	ENSCGRG00001010581	Prdm5	100	90.667	Cricetulus_griseus_chok1gshd
ENSACAG00000012999	PRDM5	95	68.333	ENSCGRG00000010996	-	99	68.167	Cricetulus_griseus_crigri
ENSACAG00000012999	PRDM5	100	76.862	ENSCSEG00000019979	prdm5	100	77.179	Cynoglossus_semilaevis
ENSACAG00000012999	PRDM5	100	75.753	ENSCVAG00000013692	prdm5	100	75.753	Cyprinodon_variegatus
ENSACAG00000012999	PRDM5	100	76.899	ENSDARG00000006288	prdm5	100	76.899	Danio_rerio
ENSACAG00000012999	PRDM5	91	78.435	ENSDNOG00000002009	PRDM5	100	78.435	Dasypus_novemcinctus
ENSACAG00000012999	PRDM5	100	89.241	ENSDORG00000007739	Prdm5	100	89.241	Dipodomys_ordii
ENSACAG00000012999	PRDM5	92	58.503	ENSETEG00000020268	PRDM5	85	69.976	Echinops_telfairi
ENSACAG00000012999	PRDM5	99	68.203	ENSEBUG00000004301	prdm5	100	68.045	Eptatretus_burgeri
ENSACAG00000012999	PRDM5	100	90.667	ENSEASG00005018365	PRDM5	100	90.667	Equus_asinus_asinus
ENSACAG00000012999	PRDM5	100	68.519	ENSECAG00000024747	-	100	78.193	Equus_caballus
ENSACAG00000012999	PRDM5	99	77.022	ENSECAG00000011516	PRDM5	90	77.022	Equus_caballus
ENSACAG00000012999	PRDM5	99	72.569	ENSEEUG00000010306	PRDM5	100	72.569	Erinaceus_europaeus
ENSACAG00000012999	PRDM5	99	77.941	ENSELUG00000005894	prdm5	93	77.716	Esox_lucius
ENSACAG00000012999	PRDM5	100	78.889	ENSFCAG00000025656	PRDM5	100	78.889	Felis_catus
ENSACAG00000012999	PRDM5	95	79.128	ENSFALG00000008381	PRDM5	100	79.128	Ficedula_albicollis
ENSACAG00000012999	PRDM5	100	89.557	ENSFDAG00000021361	PRDM5	100	89.557	Fukomys_damarensis
ENSACAG00000012999	PRDM5	100	77.496	ENSFHEG00000013040	prdm5	100	77.338	Fundulus_heteroclitus
ENSACAG00000012999	PRDM5	100	76.316	ENSGMOG00000012038	prdm5	94	76.316	Gadus_morhua
ENSACAG00000012999	PRDM5	100	89.258	ENSGALG00000011963	PRDM5	100	89.258	Gallus_gallus
ENSACAG00000012999	PRDM5	99	78.085	ENSGAFG00000019233	prdm5	100	73.851	Gambusia_affinis
ENSACAG00000012999	PRDM5	99	86.015	ENSGAGG00000020362	PRDM5	99	84.674	Gopherus_agassizii
ENSACAG00000012999	PRDM5	100	90.190	ENSGGOG00000013562	PRDM5	100	90.190	Gorilla_gorilla
ENSACAG00000012999	PRDM5	100	77.338	ENSHBUG00000023375	prdm5	100	77.496	Haplochromis_burtoni
ENSACAG00000012999	PRDM5	100	76.423	ENSHGLG00000003010	PRDM5	100	81.329	Heterocephalus_glaber_female
ENSACAG00000012999	PRDM5	100	89.873	ENSHGLG00100003696	PRDM5	100	89.873	Heterocephalus_glaber_male
ENSACAG00000012999	PRDM5	100	78.956	ENSHCOG00000012131	prdm5	100	78.956	Hippocampus_comes
ENSACAG00000012999	PRDM5	100	79.114	ENSIPUG00000001248	prdm5	99	79.114	Ictalurus_punctatus
ENSACAG00000012999	PRDM5	95	87.658	ENSSTOG00000004741	PRDM5	100	87.658	Ictidomys_tridecemlineatus
ENSACAG00000012999	PRDM5	95	89.241	ENSJJAG00000011464	Prdm5	100	89.241	Jaculus_jaculus
ENSACAG00000012999	PRDM5	100	77.971	ENSKMAG00000013663	prdm5	100	77.338	Kryptolebias_marmoratus
ENSACAG00000012999	PRDM5	100	80.032	ENSLBEG00000022736	prdm5	100	80.032	Labrus_bergylta
ENSACAG00000012999	PRDM5	91	85.913	ENSLACG00000009187	PRDM5	99	85.913	Latimeria_chalumnae
ENSACAG00000012999	PRDM5	100	82.250	ENSLOCG00000009778	prdm5	99	82.063	Lepisosteus_oculatus
ENSACAG00000012999	PRDM5	100	76.349	ENSLAFG00000006532	PRDM5	99	84.494	Loxodonta_africana
ENSACAG00000012999	PRDM5	100	90.190	ENSMFAG00000045845	PRDM5	100	90.190	Macaca_fascicularis
ENSACAG00000012999	PRDM5	100	90.190	ENSMMUG00000003249	PRDM5	100	90.190	Macaca_mulatta
ENSACAG00000012999	PRDM5	100	90.190	ENSMNEG00000019018	PRDM5	100	90.190	Macaca_nemestrina
ENSACAG00000012999	PRDM5	99	76.874	ENSMLEG00000023145	PRDM5	100	79.466	Mandrillus_leucophaeus
ENSACAG00000012999	PRDM5	100	78.288	ENSMAMG00000013419	prdm5	100	78.130	Mastacembelus_armatus
ENSACAG00000012999	PRDM5	100	77.338	ENSMZEG00005020645	prdm5	100	77.496	Maylandia_zebra
ENSACAG00000012999	PRDM5	95	89.369	ENSMGAG00000010710	PRDM5	100	89.369	Meleagris_gallopavo
ENSACAG00000012999	PRDM5	100	90.667	ENSMAUG00000006768	Prdm5	100	90.667	Mesocricetus_auratus
ENSACAG00000012999	PRDM5	100	89.557	ENSMICG00000001459	PRDM5	100	89.557	Microcebus_murinus
ENSACAG00000012999	PRDM5	100	90.667	ENSMOCG00000016267	Prdm5	100	90.667	Microtus_ochrogaster
ENSACAG00000012999	PRDM5	100	77.021	ENSMMOG00000006035	prdm5	100	77.021	Mola_mola
ENSACAG00000012999	PRDM5	100	80.885	ENSMODG00000018942	PRDM5	100	80.727	Monodelphis_domestica
ENSACAG00000012999	PRDM5	100	73.851	ENSMALG00000013934	prdm5	100	74.643	Monopterus_albus
ENSACAG00000012999	PRDM5	100	90.000	MGP_CAROLIEiJ_G0028463	Prdm5	100	90.000	Mus_caroli
ENSACAG00000012999	PRDM5	100	90.000	ENSMUSG00000029913	Prdm5	100	90.000	Mus_musculus
ENSACAG00000012999	PRDM5	100	90.000	MGP_PahariEiJ_G0022203	Prdm5	100	90.000	Mus_pahari
ENSACAG00000012999	PRDM5	100	90.000	MGP_SPRETEiJ_G0029467	Prdm5	100	90.000	Mus_spretus
ENSACAG00000012999	PRDM5	100	78.571	ENSMPUG00000017415	PRDM5	100	78.571	Mustela_putorius_furo
ENSACAG00000012999	PRDM5	91	71.799	ENSMLUG00000006097	PRDM5	100	71.799	Myotis_lucifugus
ENSACAG00000012999	PRDM5	100	90.000	ENSNGAG00000018317	Prdm5	100	90.000	Nannospalax_galili
ENSACAG00000012999	PRDM5	100	68.906	ENSNBRG00000004976	prdm5	100	73.302	Neolamprologus_brichardi
ENSACAG00000012999	PRDM5	100	90.190	ENSNLEG00000009107	PRDM5	100	90.190	Nomascus_leucogenys
ENSACAG00000012999	PRDM5	84	83.051	ENSMEUG00000006576	-	71	83.051	Notamacropus_eugenii
ENSACAG00000012999	PRDM5	95	64.449	ENSOPRG00000011066	-	89	63.410	Ochotona_princeps
ENSACAG00000012999	PRDM5	99	89.557	ENSODEG00000009133	PRDM5	100	89.557	Octodon_degus
ENSACAG00000012999	PRDM5	100	79.905	ENSONIG00000003111	prdm5	99	79.556	Oreochromis_niloticus
ENSACAG00000012999	PRDM5	69	98.889	ENSOANG00000006197	-	100	98.889	Ornithorhynchus_anatinus
ENSACAG00000012999	PRDM5	99	74.053	ENSOANG00000015109	PRDM5	97	74.855	Ornithorhynchus_anatinus
ENSACAG00000012999	PRDM5	93	71.891	ENSOCUG00000013454	PRDM5	100	73.083	Oryctolagus_cuniculus
ENSACAG00000012999	PRDM5	100	77.179	ENSORLG00000016247	prdm5	100	76.862	Oryzias_latipes
ENSACAG00000012999	PRDM5	100	76.704	ENSORLG00020018051	prdm5	100	76.704	Oryzias_latipes_hni
ENSACAG00000012999	PRDM5	100	77.179	ENSORLG00015013760	prdm5	100	76.862	Oryzias_latipes_hsok
ENSACAG00000012999	PRDM5	100	76.582	ENSOMEG00000005143	prdm5	100	77.057	Oryzias_melastigma
ENSACAG00000012999	PRDM5	84	76.271	ENSOGAG00000009996	PRDM5	98	76.030	Otolemur_garnettii
ENSACAG00000012999	PRDM5	95	77.231	ENSOARG00000015473	PRDM5	100	75.274	Ovis_aries
ENSACAG00000012999	PRDM5	99	76.874	ENSPPAG00000043045	PRDM5	100	79.046	Pan_paniscus
ENSACAG00000012999	PRDM5	100	79.048	ENSPPRG00000001020	PRDM5	100	79.048	Panthera_pardus
ENSACAG00000012999	PRDM5	95	78.464	ENSPTIG00000010807	PRDM5	95	78.464	Panthera_tigris_altaica
ENSACAG00000012999	PRDM5	100	90.190	ENSPTRG00000016403	PRDM5	100	90.190	Pan_troglodytes
ENSACAG00000012999	PRDM5	100	90.190	ENSPANG00000023612	PRDM5	100	90.190	Papio_anubis
ENSACAG00000012999	PRDM5	99	51.510	ENSPKIG00000015492	prdm5	100	57.120	Paramormyrops_kingsleyae
ENSACAG00000012999	PRDM5	100	89.889	ENSPSIG00000013505	PRDM5	100	89.889	Pelodiscus_sinensis
ENSACAG00000012999	PRDM5	100	75.119	ENSPMGG00000012622	prdm5	100	75.119	Periophthalmus_magnuspinnatus
ENSACAG00000012999	PRDM5	73	75.728	ENSPMAG00000005248	prdm5	100	76.942	Petromyzon_marinus
ENSACAG00000012999	PRDM5	99	66.995	ENSPFOG00000018630	prdm5	99	66.420	Poecilia_formosa
ENSACAG00000012999	PRDM5	100	79.715	ENSPLAG00000014148	prdm5	100	79.398	Poecilia_latipinna
ENSACAG00000012999	PRDM5	100	77.971	ENSPMEG00000018002	prdm5	100	77.655	Poecilia_mexicana
ENSACAG00000012999	PRDM5	100	77.971	ENSPREG00000018366	prdm5	100	77.655	Poecilia_reticulata
ENSACAG00000012999	PRDM5	100	79.683	ENSPPYG00000015031	PRDM5	100	79.683	Pongo_abelii
ENSACAG00000012999	PRDM5	95	73.456	ENSPCAG00000011671	PRDM5	100	73.456	Procavia_capensis
ENSACAG00000012999	PRDM5	100	89.557	ENSPCOG00000022828	PRDM5	100	89.557	Propithecus_coquereli
ENSACAG00000012999	PRDM5	95	74.457	ENSPVAG00000012309	PRDM5	100	74.457	Pteropus_vampyrus
ENSACAG00000012999	PRDM5	100	77.496	ENSPNYG00000012194	prdm5	100	77.179	Pundamilia_nyererei
ENSACAG00000012999	PRDM5	100	77.179	ENSPNAG00000026181	prdm5	100	77.179	Pygocentrus_nattereri
ENSACAG00000012999	PRDM5	93	74.873	ENSPNAG00000023191	-	100	74.873	Pygocentrus_nattereri
ENSACAG00000012999	PRDM5	99	71.939	ENSRNOG00000023679	Prdm5	99	71.939	Rattus_norvegicus
ENSACAG00000012999	PRDM5	100	90.190	ENSRBIG00000041307	PRDM5	100	90.190	Rhinopithecus_bieti
ENSACAG00000012999	PRDM5	95	62.527	ENSRROG00000035343	PRDM5	100	71.452	Rhinopithecus_roxellana
ENSACAG00000012999	PRDM5	100	90.190	ENSSBOG00000022100	PRDM5	100	90.190	Saimiri_boliviensis_boliviensis
ENSACAG00000012999	PRDM5	91	78.074	ENSSHAG00000003250	PRDM5	100	77.664	Sarcophilus_harrisii
ENSACAG00000012999	PRDM5	100	75.911	ENSSFOG00015020478	prdm5	100	75.753	Scleropages_formosus
ENSACAG00000012999	PRDM5	100	80.507	ENSSMAG00000018844	prdm5	99	80.190	Scophthalmus_maximus
ENSACAG00000012999	PRDM5	100	77.971	ENSSDUG00000020397	prdm5	100	77.971	Seriola_dumerili
ENSACAG00000012999	PRDM5	99	79.066	ENSSLDG00000013353	prdm5	100	77.971	Seriola_lalandi_dorsalis
ENSACAG00000012999	PRDM5	95	90.598	ENSSARG00000014129	-	65	90.598	Sorex_araneus
ENSACAG00000012999	PRDM5	100	98.101	ENSSPUG00000009941	PRDM5	100	98.101	Sphenodon_punctatus
ENSACAG00000012999	PRDM5	100	80.190	ENSSPAG00000013866	prdm5	100	80.190	Stegastes_partitus
ENSACAG00000012999	PRDM5	100	79.206	ENSSSCG00000009101	PRDM5	100	79.206	Sus_scrofa
ENSACAG00000012999	PRDM5	95	88.982	ENSTGUG00000001920	PRDM5	100	88.982	Taeniopygia_guttata
ENSACAG00000012999	PRDM5	100	76.862	ENSTRUG00000013850	prdm5	100	77.215	Takifugu_rubripes
ENSACAG00000012999	PRDM5	100	64.613	ENSTNIG00000005901	prdm5	100	64.082	Tetraodon_nigroviridis
ENSACAG00000012999	PRDM5	95	70.411	ENSTBEG00000015386	PRDM5	86	70.411	Tupaia_belangeri
ENSACAG00000012999	PRDM5	100	78.095	ENSTTRG00000010996	PRDM5	100	78.095	Tursiops_truncatus
ENSACAG00000012999	PRDM5	95	89.316	ENSUAMG00000009994	PRDM5	77	89.316	Ursus_americanus
ENSACAG00000012999	PRDM5	95	90.506	ENSUMAG00000003733	PRDM5	99	90.506	Ursus_maritimus
ENSACAG00000012999	PRDM5	97	69.281	ENSVPAG00000007435	PRDM5	100	69.281	Vicugna_pacos
ENSACAG00000012999	PRDM5	93	78.365	ENSVVUG00000013192	PRDM5	100	78.365	Vulpes_vulpes
ENSACAG00000012999	PRDM5	100	80.222	ENSXETG00000002101	prdm5	100	79.873	Xenopus_tropicalis
ENSACAG00000012999	PRDM5	100	77.971	ENSXCOG00000008567	prdm5	100	77.971	Xiphophorus_couchianus
ENSACAG00000012999	PRDM5	100	77.971	ENSXMAG00000013825	prdm5	100	77.971	Xiphophorus_maculatus