EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000013653 (Gene tree)
Gene ID: 100552556
Gene Symbol: -
Alias: -
Full Name: SYF2 pre-mRNA splicing factor
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 3080 bases
Position: chrGL343703.1:105224-108303
Accession: 100552556
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000013415	SYF2	PF08231.12	8e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000013689	-	615	XM_003228700	ENSACAP00000013415	204 (aa)	XP_003228748	H9GK39

Gene Model

Click here to download ENSACAG00000013653's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000013653's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000013653	-	81	83.832	ENSACAG00000026777	-	100	83.832

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000013653	-	100	86.275	ENSG00000117614	SYF2	84	86.275	Homo_sapiens
ENSACAG00000013653	-	100	84.314	ENSAPOG00000001174	syf2	86	84.314	Acanthochromis_polyacanthus
ENSACAG00000013653	-	100	85.294	ENSAMEG00000010115	-	84	85.294	Ailuropoda_melanoleuca
ENSACAG00000013653	-	96	85.641	ENSAMEG00000010134	-	100	85.641	Ailuropoda_melanoleuca
ENSACAG00000013653	-	100	81.373	ENSACIG00000023688	syf2	82	81.373	Amphilophus_citrinellus
ENSACAG00000013653	-	92	83.422	ENSAOCG00000010912	syf2	58	83.422	Amphiprion_ocellaris
ENSACAG00000013653	-	100	84.804	ENSAOCG00000022046	syf2	87	84.804	Amphiprion_ocellaris
ENSACAG00000013653	-	100	84.804	ENSAPEG00000018858	syf2	79	84.804	Amphiprion_percula
ENSACAG00000013653	-	100	83.333	ENSATEG00000007745	syf2	86	83.333	Anabas_testudineus
ENSACAG00000013653	-	98	89.500	ENSAPLG00000016435	SYF2	99	89.500	Anas_platyrhynchos
ENSACAG00000013653	-	100	85.784	ENSANAG00000032473	SYF2	84	85.784	Aotus_nancymaae
ENSACAG00000013653	-	100	81.373	ENSACLG00000019916	syf2	86	81.373	Astatotilapia_calliptera
ENSACAG00000013653	-	100	80.882	ENSAMXG00000004051	syf2	86	80.882	Astyanax_mexicanus
ENSACAG00000013653	-	100	85.294	ENSBTAG00000001651	SYF2	86	85.294	Bos_taurus
ENSACAG00000013653	-	99	53.695	WBGene00019402	syf-2	87	53.202	Caenorhabditis_elegans
ENSACAG00000013653	-	100	85.784	ENSCJAG00000046570	SYF2	84	85.784	Callithrix_jacchus
ENSACAG00000013653	-	100	81.373	ENSCAFG00000030331	-	89	81.373	Canis_familiaris
ENSACAG00000013653	-	100	85.294	ENSCAFG00000012895	-	83	85.294	Canis_familiaris
ENSACAG00000013653	-	89	77.473	ENSCAFG00020021094	-	95	77.473	Canis_lupus_dingo
ENSACAG00000013653	-	100	85.294	ENSCAFG00020021091	-	83	85.294	Canis_lupus_dingo
ENSACAG00000013653	-	100	85.294	ENSCHIG00000020874	SYF2	85	85.294	Capra_hircus
ENSACAG00000013653	-	100	85.784	ENSTSYG00000005114	SYF2	84	85.784	Carlito_syrichta
ENSACAG00000013653	-	97	86.364	ENSCAPG00000010006	SYF2	100	86.364	Cavia_aperea
ENSACAG00000013653	-	100	84.804	ENSCPOG00000005326	SYF2	84	84.804	Cavia_porcellus
ENSACAG00000013653	-	100	85.784	ENSCCAG00000022459	SYF2	84	85.784	Cebus_capucinus
ENSACAG00000013653	-	100	85.294	ENSCATG00000026917	SYF2	84	85.294	Cercocebus_atys
ENSACAG00000013653	-	100	85.784	ENSCLAG00000008474	SYF2	84	85.784	Chinchilla_lanigera
ENSACAG00000013653	-	100	85.294	ENSCSAG00000000948	SYF2	84	85.294	Chlorocebus_sabaeus
ENSACAG00000013653	-	63	79.070	ENSCHOG00000005273	-	79	79.070	Choloepus_hoffmanni
ENSACAG00000013653	-	100	92.157	ENSCPBG00000025073	SYF2	82	92.157	Chrysemys_picta_bellii
ENSACAG00000013653	-	98	53.960	ENSCING00000003017	-	84	54.455	Ciona_intestinalis
ENSACAG00000013653	-	98	52.475	ENSCSAVG00000006627	-	92	52.475	Ciona_savignyi
ENSACAG00000013653	-	100	73.529	ENSCANG00000037322	SYF2	81	73.529	Colobus_angolensis_palliatus
ENSACAG00000013653	-	100	83.333	ENSCGRG00001020733	Syf2	84	83.333	Cricetulus_griseus_chok1gshd
ENSACAG00000013653	-	96	85.204	ENSCGRG00000005095	Syf2	97	84.500	Cricetulus_griseus_crigri
ENSACAG00000013653	-	100	76.961	ENSCSEG00000000117	syf2	85	76.961	Cynoglossus_semilaevis
ENSACAG00000013653	-	100	82.353	ENSCVAG00000019543	syf2	85	82.353	Cyprinodon_variegatus
ENSACAG00000013653	-	100	80.882	ENSDARG00000004706	syf2	86	80.882	Danio_rerio
ENSACAG00000013653	-	100	85.294	ENSDNOG00000047605	SYF2	83	85.294	Dasypus_novemcinctus
ENSACAG00000013653	-	100	85.784	ENSDORG00000001274	Syf2	84	85.784	Dipodomys_ordii
ENSACAG00000013653	-	97	59.500	FBgn0033556	CG12343	88	59.500	Drosophila_melanogaster
ENSACAG00000013653	-	93	68.947	ENSETEG00000015729	SYF2	83	68.947	Echinops_telfairi
ENSACAG00000013653	-	97	60.914	ENSEBUG00000015402	syf2	95	60.914	Eptatretus_burgeri
ENSACAG00000013653	-	100	75.000	ENSEASG00005004232	-	84	75.000	Equus_asinus_asinus
ENSACAG00000013653	-	100	85.784	ENSEASG00005004224	-	83	85.784	Equus_asinus_asinus
ENSACAG00000013653	-	100	85.784	ENSECAG00000012023	-	83	85.784	Equus_caballus
ENSACAG00000013653	-	100	85.784	ENSECAG00000010440	-	85	85.784	Equus_caballus
ENSACAG00000013653	-	70	72.727	ENSEEUG00000015084	SYF2	78	72.727	Erinaceus_europaeus
ENSACAG00000013653	-	100	83.333	ENSELUG00000003465	syf2	86	83.333	Esox_lucius
ENSACAG00000013653	-	100	85.784	ENSFCAG00000043095	-	83	85.784	Felis_catus
ENSACAG00000013653	-	100	86.275	ENSFCAG00000010324	-	71	86.275	Felis_catus
ENSACAG00000013653	-	97	86.869	ENSFALG00000000460	SYF2	80	86.869	Ficedula_albicollis
ENSACAG00000013653	-	100	85.294	ENSFDAG00000008310	SYF2	84	85.294	Fukomys_damarensis
ENSACAG00000013653	-	100	66.829	ENSFHEG00000007238	syf2	91	66.829	Fundulus_heteroclitus
ENSACAG00000013653	-	100	80.882	ENSGMOG00000019138	syf2	91	80.882	Gadus_morhua
ENSACAG00000013653	-	100	87.745	ENSGALG00000013639	SYF2	81	87.745	Gallus_gallus
ENSACAG00000013653	-	100	80.882	ENSGAFG00000019435	syf2	86	80.882	Gambusia_affinis
ENSACAG00000013653	-	100	80.882	ENSGACG00000007305	syf2	85	80.882	Gasterosteus_aculeatus
ENSACAG00000013653	-	100	92.647	ENSGAGG00000010670	SYF2	82	92.647	Gopherus_agassizii
ENSACAG00000013653	-	100	85.784	ENSGGOG00000012796	SYF2	84	85.784	Gorilla_gorilla
ENSACAG00000013653	-	100	81.373	ENSHBUG00000020477	syf2	88	81.373	Haplochromis_burtoni
ENSACAG00000013653	-	100	85.784	ENSHGLG00000014393	SYF2	84	85.784	Heterocephalus_glaber_female
ENSACAG00000013653	-	100	73.529	ENSHGLG00000004304	-	84	74.020	Heterocephalus_glaber_female
ENSACAG00000013653	-	100	85.784	ENSHGLG00100014722	SYF2	84	85.784	Heterocephalus_glaber_male
ENSACAG00000013653	-	100	81.373	ENSHCOG00000012904	syf2	67	81.373	Hippocampus_comes
ENSACAG00000013653	-	100	79.902	ENSIPUG00000019859	syf2	86	79.902	Ictalurus_punctatus
ENSACAG00000013653	-	72	83.562	ENSSTOG00000023984	SYF2	100	83.562	Ictidomys_tridecemlineatus
ENSACAG00000013653	-	98	86.432	ENSJJAG00000013301	Syf2	94	86.432	Jaculus_jaculus
ENSACAG00000013653	-	100	83.333	ENSKMAG00000013856	syf2	86	83.333	Kryptolebias_marmoratus
ENSACAG00000013653	-	100	83.333	ENSLBEG00000014425	syf2	86	83.333	Labrus_bergylta
ENSACAG00000013653	-	100	84.314	ENSLACG00000012064	SYF2	86	84.314	Latimeria_chalumnae
ENSACAG00000013653	-	100	83.333	ENSLOCG00000002728	syf2	81	83.333	Lepisosteus_oculatus
ENSACAG00000013653	-	87	58.427	ENSLAFG00000030814	-	97	58.427	Loxodonta_africana
ENSACAG00000013653	-	100	85.294	ENSLAFG00000023150	-	83	85.294	Loxodonta_africana
ENSACAG00000013653	-	100	85.294	ENSMFAG00000041831	SYF2	84	85.294	Macaca_fascicularis
ENSACAG00000013653	-	100	85.294	ENSMMUG00000002968	SYF2	84	85.294	Macaca_mulatta
ENSACAG00000013653	-	100	85.294	ENSMNEG00000030180	SYF2	84	85.294	Macaca_nemestrina
ENSACAG00000013653	-	100	85.294	ENSMLEG00000030248	SYF2	84	85.294	Mandrillus_leucophaeus
ENSACAG00000013653	-	100	83.333	ENSMAMG00000010403	syf2	85	83.333	Mastacembelus_armatus
ENSACAG00000013653	-	100	81.373	ENSMZEG00005006429	syf2	86	81.373	Maylandia_zebra
ENSACAG00000013653	-	98	89.447	ENSMGAG00000002019	SYF2	100	89.447	Meleagris_gallopavo
ENSACAG00000013653	-	100	84.804	ENSMAUG00000018974	Syf2	84	84.804	Mesocricetus_auratus
ENSACAG00000013653	-	98	86.432	ENSMICG00000016191	SYF2	100	86.432	Microcebus_murinus
ENSACAG00000013653	-	100	84.314	ENSMOCG00000022938	Syf2	84	84.314	Microtus_ochrogaster
ENSACAG00000013653	-	100	82.843	ENSMMOG00000002396	syf2	85	82.843	Mola_mola
ENSACAG00000013653	-	100	82.524	ENSMODG00000013951	-	90	82.524	Monodelphis_domestica
ENSACAG00000013653	-	100	81.463	ENSMALG00000010706	syf2	85	81.951	Monopterus_albus
ENSACAG00000013653	-	100	84.804	MGP_CAROLIEiJ_G0026633	Syf2	84	84.804	Mus_caroli
ENSACAG00000013653	-	100	84.804	ENSMUSG00000028821	Syf2	84	84.804	Mus_musculus
ENSACAG00000013653	-	100	84.804	MGP_PahariEiJ_G0028966	Syf2	84	84.804	Mus_pahari
ENSACAG00000013653	-	100	84.804	MGP_SPRETEiJ_G0027613	Syf2	84	84.804	Mus_spretus
ENSACAG00000013653	-	100	85.294	ENSMPUG00000015801	-	83	85.294	Mustela_putorius_furo
ENSACAG00000013653	-	100	85.294	ENSMPUG00000015802	-	83	85.294	Mustela_putorius_furo
ENSACAG00000013653	-	100	84.804	ENSMLUG00000001885	SYF2	84	84.804	Myotis_lucifugus
ENSACAG00000013653	-	100	85.294	ENSNGAG00000007912	Syf2	83	85.294	Nannospalax_galili
ENSACAG00000013653	-	100	71.635	ENSNBRG00000010720	syf2	87	71.635	Neolamprologus_brichardi
ENSACAG00000013653	-	100	85.784	ENSNLEG00000035185	SYF2	84	85.784	Nomascus_leucogenys
ENSACAG00000013653	-	100	84.314	ENSOPRG00000012870	SYF2	84	84.314	Ochotona_princeps
ENSACAG00000013653	-	100	75.490	ENSODEG00000014338	-	84	75.490	Octodon_degus
ENSACAG00000013653	-	100	84.804	ENSODEG00000017664	-	86	84.804	Octodon_degus
ENSACAG00000013653	-	100	80.882	ENSONIG00000008213	syf2	86	80.882	Oreochromis_niloticus
ENSACAG00000013653	-	98	88.500	ENSOANG00000009552	SYF2	99	88.500	Ornithorhynchus_anatinus
ENSACAG00000013653	-	100	85.784	ENSOCUG00000013050	SYF2	84	85.784	Oryctolagus_cuniculus
ENSACAG00000013653	-	100	83.333	ENSORLG00000028820	syf2	88	83.333	Oryzias_latipes
ENSACAG00000013653	-	100	83.333	ENSORLG00020018333	syf2	86	83.333	Oryzias_latipes_hni
ENSACAG00000013653	-	100	83.333	ENSORLG00015014665	syf2	86	83.333	Oryzias_latipes_hsok
ENSACAG00000013653	-	100	84.314	ENSOMEG00000013911	syf2	86	84.314	Oryzias_melastigma
ENSACAG00000013653	-	100	85.294	ENSOGAG00000009962	SYF2	84	85.294	Otolemur_garnettii
ENSACAG00000013653	-	96	63.077	ENSOARG00000006269	-	100	63.077	Ovis_aries
ENSACAG00000013653	-	100	84.466	ENSOARG00000006348	-	83	84.466	Ovis_aries
ENSACAG00000013653	-	100	85.784	ENSPPAG00000036579	SYF2	84	85.784	Pan_paniscus
ENSACAG00000013653	-	100	86.275	ENSPPRG00000001638	-	83	86.275	Panthera_pardus
ENSACAG00000013653	-	100	85.784	ENSPPRG00000001651	-	83	85.784	Panthera_pardus
ENSACAG00000013653	-	100	85.784	ENSPTIG00000007036	-	83	85.784	Panthera_tigris_altaica
ENSACAG00000013653	-	100	86.275	ENSPTIG00000005711	-	74	86.275	Panthera_tigris_altaica
ENSACAG00000013653	-	100	85.784	ENSPTRG00000000352	SYF2	84	85.784	Pan_troglodytes
ENSACAG00000013653	-	100	85.294	ENSPANG00000008139	SYF2	84	85.294	Papio_anubis
ENSACAG00000013653	-	100	83.824	ENSPKIG00000008130	syf2	87	83.824	Paramormyrops_kingsleyae
ENSACAG00000013653	-	100	90.196	ENSPSIG00000011816	SYF2	79	90.196	Pelodiscus_sinensis
ENSACAG00000013653	-	100	79.902	ENSPMGG00000008755	syf2	80	79.902	Periophthalmus_magnuspinnatus
ENSACAG00000013653	-	100	83.824	ENSPEMG00000008283	Syf2	84	83.824	Peromyscus_maniculatus_bairdii
ENSACAG00000013653	-	100	87.745	ENSPCIG00000014235	SYF2	82	87.745	Phascolarctos_cinereus
ENSACAG00000013653	-	100	81.863	ENSPFOG00000004116	syf2	84	81.863	Poecilia_formosa
ENSACAG00000013653	-	100	81.863	ENSPLAG00000006691	syf2	88	81.863	Poecilia_latipinna
ENSACAG00000013653	-	100	78.431	ENSPMEG00000011684	syf2	87	78.431	Poecilia_mexicana
ENSACAG00000013653	-	100	82.353	ENSPREG00000003009	syf2	86	82.353	Poecilia_reticulata
ENSACAG00000013653	-	100	85.784	ENSPPYG00000001713	SYF2	84	85.784	Pongo_abelii
ENSACAG00000013653	-	78	69.182	ENSPCOG00000027011	SYF2	75	69.182	Propithecus_coquereli
ENSACAG00000013653	-	100	74.510	ENSPVAG00000005841	SYF2	83	74.510	Pteropus_vampyrus
ENSACAG00000013653	-	100	81.373	ENSPNYG00000004979	syf2	86	81.373	Pundamilia_nyererei
ENSACAG00000013653	-	100	81.863	ENSPNAG00000015570	syf2	86	81.863	Pygocentrus_nattereri
ENSACAG00000013653	-	100	84.804	ENSRNOG00000060597	Syf2	84	84.804	Rattus_norvegicus
ENSACAG00000013653	-	100	83.333	ENSRBIG00000042970	SYF2	84	83.333	Rhinopithecus_bieti
ENSACAG00000013653	-	100	85.294	ENSRROG00000001347	SYF2	84	85.294	Rhinopithecus_roxellana
ENSACAG00000013653	-	100	85.784	ENSSBOG00000020184	SYF2	84	85.784	Saimiri_boliviensis_boliviensis
ENSACAG00000013653	-	98	88.945	ENSSHAG00000007152	-	97	88.945	Sarcophilus_harrisii
ENSACAG00000013653	-	100	86.275	ENSSHAG00000015630	-	82	86.275	Sarcophilus_harrisii
ENSACAG00000013653	-	100	83.333	ENSSFOG00015023647	syf2	86	83.333	Scleropages_formosus
ENSACAG00000013653	-	100	81.863	ENSSMAG00000009867	syf2	86	81.863	Scophthalmus_maximus
ENSACAG00000013653	-	100	82.843	ENSSDUG00000013072	syf2	86	82.843	Seriola_dumerili
ENSACAG00000013653	-	100	82.843	ENSSLDG00000012677	syf2	86	82.843	Seriola_lalandi_dorsalis
ENSACAG00000013653	-	77	82.803	ENSSARG00000012889	SYF2	64	82.803	Sorex_araneus
ENSACAG00000013653	-	100	90.686	ENSSPUG00000005251	SYF2	81	90.686	Sphenodon_punctatus
ENSACAG00000013653	-	100	83.824	ENSSPAG00000009626	syf2	86	83.824	Stegastes_partitus
ENSACAG00000013653	-	100	85.294	ENSSSCG00000037481	SYF2	83	85.294	Sus_scrofa
ENSACAG00000013653	-	65	62.963	ENSTGUG00000001126	SYF2	51	77.451	Taeniopygia_guttata
ENSACAG00000013653	-	100	81.373	ENSTRUG00000001499	syf2	82	81.373	Takifugu_rubripes
ENSACAG00000013653	-	100	78.922	ENSTNIG00000016912	syf2	91	78.922	Tetraodon_nigroviridis
ENSACAG00000013653	-	98	62.000	ENSTBEG00000017370	SYF2	81	61.765	Tupaia_belangeri
ENSACAG00000013653	-	100	85.294	ENSTTRG00000003550	SYF2	84	85.294	Tursiops_truncatus
ENSACAG00000013653	-	100	84.804	ENSUAMG00000002897	SYF2	83	84.804	Ursus_americanus
ENSACAG00000013653	-	100	84.804	ENSUMAG00000013108	SYF2	83	84.804	Ursus_maritimus
ENSACAG00000013653	-	100	84.804	ENSVPAG00000005705	SYF2	84	84.804	Vicugna_pacos
ENSACAG00000013653	-	100	85.294	ENSVVUG00000027175	-	83	85.294	Vulpes_vulpes
ENSACAG00000013653	-	100	84.314	ENSVVUG00000027181	-	82	84.314	Vulpes_vulpes
ENSACAG00000013653	-	100	81.863	ENSXETG00000022797	syf2	82	81.863	Xenopus_tropicalis
ENSACAG00000013653	-	100	82.353	ENSXMAG00000022698	syf2	86	82.353	Xiphophorus_maculatus