EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000013667 (Gene tree)
Gene ID: 100561016
Gene Symbol: PNLDC1
Alias: FLJ40240|dJ195P10.2
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 32107 bases
Position: chr1:212140677-212172783
Accession: 100561016
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000013430	CAF1	PF04857.20	1.6e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000013704	PNLDC1-201	1790	XM_008123287	ENSACAP00000013430	527 (aa)	XP_008121494	G1KP33

Gene Model

Click here to download ENSACAG00000013667's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000013667's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000013667	PNLDC1	100	59.962	ENSG00000146453	PNLDC1	100	59.962	Homo_sapiens
ENSACAG00000013667	PNLDC1	98	58.846	ENSAMEG00000015371	PNLDC1	99	58.902	Ailuropoda_melanoleuca
ENSACAG00000013667	PNLDC1	95	59.566	ENSAPLG00000007014	PNLDC1	97	59.566	Anas_platyrhynchos
ENSACAG00000013667	PNLDC1	99	60.264	ENSANAG00000034713	PNLDC1	100	60.352	Aotus_nancymaae
ENSACAG00000013667	PNLDC1	95	58.974	ENSBTAG00000015166	PNLDC1	96	58.974	Bos_taurus
ENSACAG00000013667	PNLDC1	99	59.510	ENSCJAG00000011865	PNLDC1	99	59.510	Callithrix_jacchus
ENSACAG00000013667	PNLDC1	98	60.192	ENSCAFG00000000740	PNLDC1	99	60.227	Canis_familiaris
ENSACAG00000013667	PNLDC1	98	58.700	ENSCAFG00020017742	PNLDC1	99	58.757	Canis_lupus_dingo
ENSACAG00000013667	PNLDC1	99	58.769	ENSCHIG00000003141	PNLDC1	99	58.769	Capra_hircus
ENSACAG00000013667	PNLDC1	99	58.569	ENSTSYG00000005606	PNLDC1	99	58.569	Carlito_syrichta
ENSACAG00000013667	PNLDC1	99	43.152	ENSCAPG00000011893	PNLDC1	99	43.152	Cavia_aperea
ENSACAG00000013667	PNLDC1	99	54.135	ENSCPOG00000019565	PNLDC1	99	54.135	Cavia_porcellus
ENSACAG00000013667	PNLDC1	99	59.887	ENSCCAG00000026232	PNLDC1	99	59.887	Cebus_capucinus
ENSACAG00000013667	PNLDC1	99	60.452	ENSCATG00000033196	PNLDC1	99	60.452	Cercocebus_atys
ENSACAG00000013667	PNLDC1	99	58.757	ENSCLAG00000003228	PNLDC1	99	58.757	Chinchilla_lanigera
ENSACAG00000013667	PNLDC1	95	59.332	ENSCSAG00000012478	PNLDC1	97	59.332	Chlorocebus_sabaeus
ENSACAG00000013667	PNLDC1	96	66.339	ENSCPBG00000004050	PNLDC1	100	66.339	Chrysemys_picta_bellii
ENSACAG00000013667	PNLDC1	95	59.881	ENSCANG00000043076	PNLDC1	97	59.881	Colobus_angolensis_palliatus
ENSACAG00000013667	PNLDC1	99	57.250	ENSCGRG00001007470	-	99	57.250	Cricetulus_griseus_chok1gshd
ENSACAG00000013667	PNLDC1	99	47.547	ENSCGRG00001011981	-	99	47.547	Cricetulus_griseus_chok1gshd
ENSACAG00000013667	PNLDC1	99	57.250	ENSCGRG00000010221	-	99	57.250	Cricetulus_griseus_crigri
ENSACAG00000013667	PNLDC1	99	48.868	ENSCGRG00000003103	-	99	48.868	Cricetulus_griseus_crigri
ENSACAG00000013667	PNLDC1	99	58.868	ENSDNOG00000013709	PNLDC1	99	58.868	Dasypus_novemcinctus
ENSACAG00000013667	PNLDC1	99	56.238	ENSDORG00000011517	Pnldc1	99	61.218	Dipodomys_ordii
ENSACAG00000013667	PNLDC1	93	54.747	ENSETEG00000007587	PNLDC1	99	54.747	Echinops_telfairi
ENSACAG00000013667	PNLDC1	99	56.015	ENSEASG00005019029	PNLDC1	99	56.015	Equus_asinus_asinus
ENSACAG00000013667	PNLDC1	99	60.227	ENSECAG00000012898	PNLDC1	99	60.227	Equus_caballus
ENSACAG00000013667	PNLDC1	67	61.290	ENSEEUG00000005717	-	85	61.290	Erinaceus_europaeus
ENSACAG00000013667	PNLDC1	99	59.659	ENSFCAG00000002848	PNLDC1	99	59.659	Felis_catus
ENSACAG00000013667	PNLDC1	95	59.642	ENSFALG00000012081	PNLDC1	99	59.642	Ficedula_albicollis
ENSACAG00000013667	PNLDC1	99	59.134	ENSFDAG00000021334	PNLDC1	99	59.134	Fukomys_damarensis
ENSACAG00000013667	PNLDC1	79	59.472	ENSGALG00000011624	PNLDC1	82	59.472	Gallus_gallus
ENSACAG00000013667	PNLDC1	99	67.110	ENSGAGG00000015276	PNLDC1	100	67.500	Gopherus_agassizii
ENSACAG00000013667	PNLDC1	99	59.699	ENSGGOG00000014077	PNLDC1	99	59.699	Gorilla_gorilla
ENSACAG00000013667	PNLDC1	99	58.945	ENSHGLG00000006889	PNLDC1	99	58.945	Heterocephalus_glaber_female
ENSACAG00000013667	PNLDC1	99	58.945	ENSHGLG00100018275	PNLDC1	99	58.945	Heterocephalus_glaber_male
ENSACAG00000013667	PNLDC1	100	60.338	ENSSTOG00000005595	PNLDC1	100	60.338	Ictidomys_tridecemlineatus
ENSACAG00000013667	PNLDC1	100	54.135	ENSJJAG00000009937	Pnldc1	100	54.135	Jaculus_jaculus
ENSACAG00000013667	PNLDC1	59	61.076	ENSLAFG00000030189	PNLDC1	92	61.076	Loxodonta_africana
ENSACAG00000013667	PNLDC1	99	60.075	ENSMFAG00000041296	PNLDC1	99	60.075	Macaca_fascicularis
ENSACAG00000013667	PNLDC1	99	60.075	ENSMMUG00000004181	PNLDC1	99	60.075	Macaca_mulatta
ENSACAG00000013667	PNLDC1	99	60.075	ENSMNEG00000034271	PNLDC1	99	60.075	Macaca_nemestrina
ENSACAG00000013667	PNLDC1	99	57.815	ENSMLEG00000044059	PNLDC1	99	57.815	Mandrillus_leucophaeus
ENSACAG00000013667	PNLDC1	96	60.672	ENSMGAG00000012470	PNLDC1	97	60.672	Meleagris_gallopavo
ENSACAG00000013667	PNLDC1	99	51.229	ENSMAUG00000012298	Pnldc1	99	51.229	Mesocricetus_auratus
ENSACAG00000013667	PNLDC1	99	59.510	ENSMICG00000008021	PNLDC1	99	59.510	Microcebus_murinus
ENSACAG00000013667	PNLDC1	99	59.662	ENSMOCG00000014287	Pnldc1	99	59.662	Microtus_ochrogaster
ENSACAG00000013667	PNLDC1	100	60.714	ENSMODG00000007420	PNLDC1	99	60.714	Monodelphis_domestica
ENSACAG00000013667	PNLDC1	99	59.659	MGP_CAROLIEiJ_G0021045	Pnldc1	99	59.659	Mus_caroli
ENSACAG00000013667	PNLDC1	99	59.659	ENSMUSG00000073460	Pnldc1	99	62.540	Mus_musculus
ENSACAG00000013667	PNLDC1	99	59.811	MGP_PahariEiJ_G0023361	Pnldc1	99	59.811	Mus_pahari
ENSACAG00000013667	PNLDC1	99	60.038	MGP_SPRETEiJ_G0021975	Pnldc1	99	60.038	Mus_spretus
ENSACAG00000013667	PNLDC1	98	59.423	ENSMPUG00000004920	PNLDC1	99	59.470	Mustela_putorius_furo
ENSACAG00000013667	PNLDC1	99	60.417	ENSMLUG00000000747	PNLDC1	99	60.417	Myotis_lucifugus
ENSACAG00000013667	PNLDC1	99	60.075	ENSNGAG00000017714	Pnldc1	99	60.075	Nannospalax_galili
ENSACAG00000013667	PNLDC1	95	59.566	ENSNLEG00000011282	PNLDC1	97	59.566	Nomascus_leucogenys
ENSACAG00000013667	PNLDC1	54	52.249	ENSMEUG00000014042	-	100	52.249	Notamacropus_eugenii
ENSACAG00000013667	PNLDC1	61	48.910	ENSMEUG00000011926	-	64	48.910	Notamacropus_eugenii
ENSACAG00000013667	PNLDC1	78	71.053	ENSOPRG00000003813	PNLDC1	78	71.053	Ochotona_princeps
ENSACAG00000013667	PNLDC1	99	58.679	ENSODEG00000008047	PNLDC1	99	58.679	Octodon_degus
ENSACAG00000013667	PNLDC1	99	48.491	ENSOANG00000012199	PNLDC1	99	50.566	Ornithorhynchus_anatinus
ENSACAG00000013667	PNLDC1	99	59.699	ENSOCUG00000013867	PNLDC1	99	59.699	Oryctolagus_cuniculus
ENSACAG00000013667	PNLDC1	99	60.000	ENSOGAG00000007331	PNLDC1	100	60.000	Otolemur_garnettii
ENSACAG00000013667	PNLDC1	99	59.510	ENSOARG00000004585	PNLDC1	99	59.510	Ovis_aries
ENSACAG00000013667	PNLDC1	99	59.510	ENSPPAG00000026651	PNLDC1	99	59.510	Pan_paniscus
ENSACAG00000013667	PNLDC1	99	59.848	ENSPPRG00000012854	PNLDC1	99	59.848	Panthera_pardus
ENSACAG00000013667	PNLDC1	98	56.952	ENSPTIG00000011501	PNLDC1	98	56.952	Panthera_tigris_altaica
ENSACAG00000013667	PNLDC1	99	59.510	ENSPTRG00000018762	PNLDC1	99	59.510	Pan_troglodytes
ENSACAG00000013667	PNLDC1	99	60.075	ENSPANG00000022009	PNLDC1	99	60.075	Papio_anubis
ENSACAG00000013667	PNLDC1	99	60.227	ENSPEMG00000016301	Pnldc1	99	60.227	Peromyscus_maniculatus_bairdii
ENSACAG00000013667	PNLDC1	81	61.574	ENSPCIG00000023412	PNLDC1	98	61.574	Phascolarctos_cinereus
ENSACAG00000013667	PNLDC1	99	55.926	ENSPPYG00000017148	PNLDC1	99	55.926	Pongo_abelii
ENSACAG00000013667	PNLDC1	100	55.075	ENSPCAG00000014169	PNLDC1	100	55.075	Procavia_capensis
ENSACAG00000013667	PNLDC1	99	59.887	ENSPCOG00000025722	PNLDC1	99	59.887	Propithecus_coquereli
ENSACAG00000013667	PNLDC1	72	62.078	ENSPVAG00000005325	PNLDC1	72	62.078	Pteropus_vampyrus
ENSACAG00000013667	PNLDC1	99	59.510	ENSRNOG00000023140	Pnldc1	99	59.510	Rattus_norvegicus
ENSACAG00000013667	PNLDC1	99	60.227	ENSRBIG00000033806	PNLDC1	99	60.227	Rhinopithecus_bieti
ENSACAG00000013667	PNLDC1	95	60.277	ENSRROG00000043919	PNLDC1	97	60.277	Rhinopithecus_roxellana
ENSACAG00000013667	PNLDC1	99	59.887	ENSSBOG00000019135	PNLDC1	99	59.887	Saimiri_boliviensis_boliviensis
ENSACAG00000013667	PNLDC1	96	61.328	ENSSHAG00000015192	PNLDC1	98	61.328	Sarcophilus_harrisii
ENSACAG00000013667	PNLDC1	53	71.277	ENSSPUG00000004627	PNLDC1	99	71.171	Sphenodon_punctatus
ENSACAG00000013667	PNLDC1	95	59.127	ENSSSCG00000004046	PNLDC1	98	59.127	Sus_scrofa
ENSACAG00000013667	PNLDC1	92	59.588	ENSTGUG00000011418	PNLDC1	100	59.588	Taeniopygia_guttata
ENSACAG00000013667	PNLDC1	95	50.099	ENSTBEG00000009131	PNLDC1	97	50.099	Tupaia_belangeri
ENSACAG00000013667	PNLDC1	72	59.162	ENSTTRG00000010409	PNLDC1	72	59.162	Tursiops_truncatus
ENSACAG00000013667	PNLDC1	98	50.954	ENSUAMG00000015783	PNLDC1	99	51.128	Ursus_americanus
ENSACAG00000013667	PNLDC1	93	55.422	ENSUMAG00000011903	PNLDC1	99	55.534	Ursus_maritimus
ENSACAG00000013667	PNLDC1	96	60.352	ENSVVUG00000006586	PNLDC1	98	60.124	Vulpes_vulpes