EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000014045 (Gene tree)
Gene ID: 100552246
Gene Symbol: RAB20
Alias: FLJ20429
Full Name: RAB20%2C member RAS oncogene family
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 8429 bases
Position: chr1:137422853-137431281
Accession: 100552246
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000013777	MMR_HSR1	PF01926.23	2.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000014058	RAB20-201	705	XM_003215350	ENSACAP00000013777	234 (aa)	XP_003215398	G1KPF0

Gene Model

Click here to download ENSACAG00000014045's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000014045's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000014045	RAB20	73	35.519	ENSACAG00000004554	RAB17	79	35.519
ENSACAG00000014045	RAB20	70	35.000	ENSACAG00000005380	RAB5B	83	35.000
ENSACAG00000014045	RAB20	53	36.923	ENSACAG00000028613	-	59	36.923
ENSACAG00000014045	RAB20	70	35.000	ENSACAG00000000017	RAB5A	83	35.000
ENSACAG00000014045	RAB20	73	30.114	ENSACAG00000001866	-	85	30.114
ENSACAG00000014045	RAB20	82	31.122	ENSACAG00000015304	-	73	31.122

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000014045	RAB20	99	57.422	ENSATEG00000011117	rab20	99	57.422	Anabas_testudineus
ENSACAG00000014045	RAB20	99	78.788	ENSAPLG00000011744	RAB20	99	78.788	Anas_platyrhynchos
ENSACAG00000014045	RAB20	99	59.259	ENSAMXG00000003504	rab20	99	58.943	Astyanax_mexicanus
ENSACAG00000014045	RAB20	99	79.310	ENSCPBG00000005866	RAB20	99	79.310	Chrysemys_picta_bellii
ENSACAG00000014045	RAB20	99	64.103	ENSCSEG00000011160	rab20	99	64.103	Cynoglossus_semilaevis
ENSACAG00000014045	RAB20	99	64.103	ENSDARG00000005049	rab20	96	64.103	Danio_rerio
ENSACAG00000014045	RAB20	99	58.824	ENSELUG00000004092	rab20	97	58.824	Esox_lucius
ENSACAG00000014045	RAB20	99	77.056	ENSFALG00000004409	RAB20	99	77.056	Ficedula_albicollis
ENSACAG00000014045	RAB20	99	63.136	ENSGACG00000003527	rab20	99	63.136	Gasterosteus_aculeatus
ENSACAG00000014045	RAB20	99	58.566	ENSHCOG00000013468	rab20	97	58.566	Hippocampus_comes
ENSACAG00000014045	RAB20	99	66.239	ENSIPUG00000000432	RAB20	96	66.667	Ictalurus_punctatus
ENSACAG00000014045	RAB20	99	66.239	ENSIPUG00000018288	RAB20	96	66.667	Ictalurus_punctatus
ENSACAG00000014045	RAB20	99	70.130	ENSLACG00000011001	RAB20	98	70.130	Latimeria_chalumnae
ENSACAG00000014045	RAB20	99	58.824	ENSMAMG00000015214	rab20	97	58.824	Mastacembelus_armatus
ENSACAG00000014045	RAB20	99	61.441	ENSMMOG00000020022	rab20	99	61.441	Mola_mola
ENSACAG00000014045	RAB20	99	70.130	ENSMEUG00000009442	RAB20	99	70.130	Notamacropus_eugenii
ENSACAG00000014045	RAB20	86	50.000	ENSPMAG00000004439	rab20	98	50.237	Petromyzon_marinus
ENSACAG00000014045	RAB20	99	62.605	ENSPNAG00000008867	rab20	99	62.605	Pygocentrus_nattereri
ENSACAG00000014045	RAB20	99	59.055	ENSSMAG00000018818	rab20	99	59.055	Scophthalmus_maximus
ENSACAG00000014045	RAB20	99	58.984	ENSSDUG00000005148	rab20	97	58.984	Seriola_dumerili
ENSACAG00000014045	RAB20	99	77.922	ENSTGUG00000008797	RAB20	99	77.922	Taeniopygia_guttata
ENSACAG00000014045	RAB20	99	58.431	ENSTRUG00000022951	rab20	97	58.431	Takifugu_rubripes
ENSACAG00000014045	RAB20	93	64.840	ENSTNIG00000013920	rab20	99	61.702	Tetraodon_nigroviridis