EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSACAG00000014490 (Gene tree)
Gene ID
100556142
Gene Symbol
RPA1
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Anolis_carolinensis
Status
putative
Strand
Minus strand
Length
33035 bases
Position
chrGL343393.1:14226-47260
Accession
100556142
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSACAP00000014346tRNA_anti-codonPF01336.251.6e-1011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSACAT00000014639RPA1-2012624XM_008119451ENSACAP00000014346602 (aa)XP_008117658H9GLA5
Gene Model
Click here to download ENSACAG00000014490's gene model file
Pathways
Pathway IDPathway NameSource
acs03030DNA replicationKEGG
acs03420Nucleotide excision repairKEGG
acs03430Mismatch repairKEGG
acs03440Homologous recombinationKEGG
acs03460Fanconi anemia pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000014490's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSACAG00000014490RPA19857.711ENSAPOG00000011658rpa19957.118Acanthochromis_polyacanthus
ENSACAG00000014490RPA19260.731ENSAPOG00000019409RPA17960.502Acanthochromis_polyacanthus
ENSACAG00000014490RPA19962.439ENSAMEG00000007706RPA19961.626Ailuropoda_melanoleuca
ENSACAG00000014490RPA19552.470ENSACIG00000007277rpa19951.959Amphilophus_citrinellus
ENSACAG00000014490RPA19453.729ENSACIG00000012881RPA19954.068Amphilophus_citrinellus
ENSACAG00000014490RPA19857.591ENSAOCG00000023376rpa19957.168Amphiprion_ocellaris
ENSACAG00000014490RPA19951.534ENSAOCG00000009003RPA18858.913Amphiprion_ocellaris
ENSACAG00000014490RPA19759.783ENSAPEG00000019132RPA18659.565Amphiprion_percula
ENSACAG00000014490RPA19858.209ENSAPEG00000008634rpa19957.821Amphiprion_percula
ENSACAG00000014490RPA19459.337ENSATEG00000022024rpa19958.803Anabas_testudineus
ENSACAG00000014490RPA19950.306ENSATEG00000006443RPA18659.732Anabas_testudineus
ENSACAG00000014490RPA19755.718ENSAPLG00000012442RPA19071.464Anas_platyrhynchos
ENSACAG00000014490RPA19766.382ENSANAG00000023456RPA19966.382Aotus_nancymaae
ENSACAG00000014490RPA19952.174ENSACLG00000005223RPA19952.174Astatotilapia_calliptera
ENSACAG00000014490RPA19258.907ENSACLG00000006640rpa19958.377Astatotilapia_calliptera
ENSACAG00000014490RPA19956.322ENSAMXG00000008418rpa19957.192Astyanax_mexicanus
ENSACAG00000014490RPA19964.297ENSBTAG00000009711RPA19963.651Bos_taurus
ENSACAG00000014490RPA17932.025WBGene00017546rpa-16731.749Caenorhabditis_elegans
ENSACAG00000014490RPA19963.768ENSCJAG00000001848RPA19962.916Callithrix_jacchus
ENSACAG00000014490RPA19963.871ENSCAFG00000019249RPA19963.166Canis_familiaris
ENSACAG00000014490RPA19963.871ENSCAFG00020009847RPA19963.166Canis_lupus_dingo
ENSACAG00000014490RPA19964.943ENSCHIG00000026308RPA19964.136Capra_hircus
ENSACAG00000014490RPA19963.065ENSTSYG00000003482-9962.580Carlito_syrichta
ENSACAG00000014490RPA19962.258ENSCPOG00000000035RPA19961.066Cavia_porcellus
ENSACAG00000014490RPA19954.647ENSCCAG00000010981RPA19954.574Cebus_capucinus
ENSACAG00000014490RPA19959.451ENSCLAG00000015045-9958.805Chinchilla_lanigera
ENSACAG00000014490RPA19962.682ENSCLAG00000005185-9962.520Chinchilla_lanigera
ENSACAG00000014490RPA19953.662ENSCSAG00000013833RPA19954.180Chlorocebus_sabaeus
ENSACAG00000014490RPA17368.552ENSCHOG00000009454-9967.421Choloepus_hoffmanni
ENSACAG00000014490RPA19561.083ENSCHOG00000013540-9960.575Choloepus_hoffmanni
ENSACAG00000014490RPA19967.903ENSCPBG00000020377RPA19967.097Chrysemys_picta_bellii
ENSACAG00000014490RPA19940.196ENSCING00000023482-9939.604Ciona_intestinalis
ENSACAG00000014490RPA19864.796ENSCANG00000030911RPA19964.796Colobus_angolensis_palliatus
ENSACAG00000014490RPA19962.279ENSCGRG00001008197Rpa19962.440Cricetulus_griseus_chok1gshd
ENSACAG00000014490RPA18363.327ENSCGRG00000000582Rpa18867.033Cricetulus_griseus_crigri
ENSACAG00000014490RPA19947.544ENSCSEG00000012726RPA19947.297Cynoglossus_semilaevis
ENSACAG00000014490RPA19956.093ENSCSEG00000013066rpa19956.414Cynoglossus_semilaevis
ENSACAG00000014490RPA19357.208ENSCVAG00000013446-8157.208Cyprinodon_variegatus
ENSACAG00000014490RPA19857.591ENSCVAG00000019431rpa19957.857Cyprinodon_variegatus
ENSACAG00000014490RPA19956.178ENSDARG00000003938rpa19955.628Danio_rerio
ENSACAG00000014490RPA19863.072ENSDNOG00000017218RPA19862.866Dasypus_novemcinctus
ENSACAG00000014490RPA19965.105ENSDORG00000006199Rpa19964.136Dipodomys_ordii
ENSACAG00000014490RPA19842.546FBgn0010173RpA-709842.881Drosophila_melanogaster
ENSACAG00000014490RPA18163.373ENSETEG00000017608RPA18262.927Echinops_telfairi
ENSACAG00000014490RPA19765.188ENSEASG00005009372RPA19964.846Equus_asinus_asinus
ENSACAG00000014490RPA19963.813ENSECAG00000023886RPA19963.023Equus_caballus
ENSACAG00000014490RPA17067.612ENSEEUG00000002186-6866.430Erinaceus_europaeus
ENSACAG00000014490RPA18755.323ENSELUG00000006136RPA19955.513Esox_lucius
ENSACAG00000014490RPA19957.810ENSELUG00000021071rpa19957.810Esox_lucius
ENSACAG00000014490RPA19962.419ENSFCAG00000006306RPA19962.058Felis_catus
ENSACAG00000014490RPA19966.452ENSFALG00000006575RPA19966.290Ficedula_albicollis
ENSACAG00000014490RPA19962.581ENSFDAG00000007720RPA110062.258Fukomys_damarensis
ENSACAG00000014490RPA19856.908ENSFHEG00000003580rpa19956.908Fundulus_heteroclitus
ENSACAG00000014490RPA19956.711ENSGMOG00000010382rpa19955.629Gadus_morhua
ENSACAG00000014490RPA19967.044ENSGALG00000003072RPA19966.288Gallus_gallus
ENSACAG00000014490RPA19857.450ENSGAFG00000012916rpa19957.285Gambusia_affinis
ENSACAG00000014490RPA19949.774ENSGAFG00000020953RPA18757.174Gambusia_affinis
ENSACAG00000014490RPA19956.928ENSGACG00000010856rpa19956.427Gasterosteus_aculeatus
ENSACAG00000014490RPA19967.581ENSGAGG00000013611RPA19966.774Gopherus_agassizii
ENSACAG00000014490RPA19965.442ENSGGOG00000014186RPA19965.442Gorilla_gorilla
ENSACAG00000014490RPA19859.008ENSHBUG00000017773rpa19958.113Haplochromis_burtoni
ENSACAG00000014490RPA19450.523ENSHBUG00000009348RPA19850.348Haplochromis_burtoni
ENSACAG00000014490RPA19961.760ENSHGLG00000008846RPA110062.036Heterocephalus_glaber_female
ENSACAG00000014490RPA19957.835ENSHGLG00100000799-9957.674Heterocephalus_glaber_male
ENSACAG00000014490RPA19961.760ENSHGLG00100017755-10062.036Heterocephalus_glaber_male
ENSACAG00000014490RPA19953.548ENSHGLG00100002005-9952.666Heterocephalus_glaber_male
ENSACAG00000014490RPA19955.772ENSHCOG00000001401rpa19955.610Hippocampus_comes
ENSACAG00000014490RPA19943.927ENSHCOG00000000351RPA19943.023Hippocampus_comes
ENSACAG00000014490RPA19956.311ENSIPUG00000004400rpa19956.311Ictalurus_punctatus
ENSACAG00000014490RPA19859.446ENSSTOG00000022475RPA19858.564Ictidomys_tridecemlineatus
ENSACAG00000014490RPA19564.310ENSJJAG00000000876Rpa19863.912Jaculus_jaculus
ENSACAG00000014490RPA19953.485ENSKMAG00000000234RPA19953.181Kryptolebias_marmoratus
ENSACAG00000014490RPA19955.200ENSKMAG00000005605rpa19955.250Kryptolebias_marmoratus
ENSACAG00000014490RPA19960.407ENSLBEG00000002281RPA18460.407Labrus_bergylta
ENSACAG00000014490RPA19956.667ENSLBEG00000021604rpa19956.333Labrus_bergylta
ENSACAG00000014490RPA18259.312ENSLACG00000007210RPA19361.505Latimeria_chalumnae
ENSACAG00000014490RPA19958.361ENSLOCG00000006397rpa19958.525Lepisosteus_oculatus
ENSACAG00000014490RPA19962.898ENSLAFG00000015354RPA19962.420Loxodonta_africana
ENSACAG00000014490RPA18163.178ENSMFAG00000036138-9963.137Macaca_fascicularis
ENSACAG00000014490RPA19862.885ENSMMUG00000011604-9962.848Macaca_mulatta
ENSACAG00000014490RPA19957.492ENSMMUG00000002442-9957.050Macaca_mulatta
ENSACAG00000014490RPA19961.378ENSMNEG00000031632-9961.327Macaca_nemestrina
ENSACAG00000014490RPA19956.073ENSMNEG00000029837-9954.908Macaca_nemestrina
ENSACAG00000014490RPA19759.187ENSMLEG00000038768-9959.113Mandrillus_leucophaeus
ENSACAG00000014490RPA19859.447ENSMAMG00000020097RPA19057.391Mastacembelus_armatus
ENSACAG00000014490RPA19857.781ENSMAMG00000017993rpa19957.932Mastacembelus_armatus
ENSACAG00000014490RPA19859.008ENSMZEG00005007551rpa19958.113Maylandia_zebra
ENSACAG00000014490RPA19952.174ENSMZEG00005024731RPA19952.174Maylandia_zebra
ENSACAG00000014490RPA19966.019ENSMGAG00000005315RPA19965.696Meleagris_gallopavo
ENSACAG00000014490RPA19762.908ENSMAUG00000010474Rpa19963.097Mesocricetus_auratus
ENSACAG00000014490RPA19962.742ENSMICG00000012867RPA19962.359Microcebus_murinus
ENSACAG00000014490RPA19962.843ENSMOCG00000013019Rpa19962.158Microtus_ochrogaster
ENSACAG00000014490RPA19658.685ENSMMOG00000014292rpa19958.446Mola_mola
ENSACAG00000014490RPA19754.484ENSMMOG00000010868RPA19754.484Mola_mola
ENSACAG00000014490RPA19964.839ENSMODG00000010549RPA19964.839Monodelphis_domestica
ENSACAG00000014490RPA19858.209ENSMALG00000011453rpa19958.209Monopterus_albus
ENSACAG00000014490RPA19958.407ENSMALG00000001208RPA18358.186Monopterus_albus
ENSACAG00000014490RPA19961.836MGP_CAROLIEiJ_G0016734Rpa19961.836Mus_caroli
ENSACAG00000014490RPA19961.404ENSMUSG00000000751Rpa19961.085Mus_musculus
ENSACAG00000014490RPA19962.500MGP_PahariEiJ_G0017871Rpa19962.179Mus_pahari
ENSACAG00000014490RPA19961.306MGP_SPRETEiJ_G0017577Rpa19960.828Mus_spretus
ENSACAG00000014490RPA19962.641ENSMPUG00000013119RPA19962.480Mustela_putorius_furo
ENSACAG00000014490RPA19961.440ENSMLUG00000006113RPA19960.863Myotis_lucifugus
ENSACAG00000014490RPA19563.514ENSNGAG00000004522Rpa19463.514Nannospalax_galili
ENSACAG00000014490RPA19753.199ENSNBRG00000009672RPA19652.862Neolamprologus_brichardi
ENSACAG00000014490RPA19358.566ENSNBRG00000020595rpa19958.042Neolamprologus_brichardi
ENSACAG00000014490RPA19962.720ENSNLEG00000017149RPA19962.843Nomascus_leucogenys
ENSACAG00000014490RPA19756.457ENSMEUG00000006714RPA19955.863Notamacropus_eugenii
ENSACAG00000014490RPA19562.126ENSODEG00000009038RPA19661.960Octodon_degus
ENSACAG00000014490RPA19857.861ENSONIG00000013135rpa19956.981Oreochromis_niloticus
ENSACAG00000014490RPA19863.902ENSOANG00000010880RPA19963.740Ornithorhynchus_anatinus
ENSACAG00000014490RPA19961.787ENSOCUG00000001504RPA19960.709Oryctolagus_cuniculus
ENSACAG00000014490RPA19948.632ENSORLG00000003368RPA18458.691Oryzias_latipes
ENSACAG00000014490RPA19957.921ENSORLG00000004856rpa19957.711Oryzias_latipes
ENSACAG00000014490RPA19955.172ENSORLG00020015284RPA18458.186Oryzias_latipes_hni
ENSACAG00000014490RPA19958.209ENSORLG00020008980rpa19958.000Oryzias_latipes_hni
ENSACAG00000014490RPA19958.209ENSORLG00015013982rpa19958.000Oryzias_latipes_hsok
ENSACAG00000014490RPA17158.178ENSORLG00015005867-9657.944Oryzias_latipes_hsok
ENSACAG00000014490RPA19950.000ENSORLG00015020383RPA19949.226Oryzias_latipes_hsok
ENSACAG00000014490RPA19452.797ENSOMEG00000011040RPA19952.622Oryzias_melastigma
ENSACAG00000014490RPA19956.954ENSOMEG00000004704rpa19956.572Oryzias_melastigma
ENSACAG00000014490RPA19964.516ENSOGAG00000005581-9964.355Otolemur_garnettii
ENSACAG00000014490RPA17463.934ENSOGAG00000029379-9763.793Otolemur_garnettii
ENSACAG00000014490RPA19964.943ENSOARG00000014479RPA19964.136Ovis_aries
ENSACAG00000014490RPA19963.446ENSPPAG00000039680RPA19963.328Pan_paniscus
ENSACAG00000014490RPA19962.742ENSPPRG00000011807RPA19962.219Panthera_pardus
ENSACAG00000014490RPA19962.742ENSPTIG00000007898RPA19962.219Panthera_tigris_altaica
ENSACAG00000014490RPA19963.446ENSPTRG00000008539RPA19963.328Pan_troglodytes
ENSACAG00000014490RPA19963.040ENSPANG00000024592RPA19963.005Papio_anubis
ENSACAG00000014490RPA19457.586ENSPKIG00000008053rpa19457.241Paramormyrops_kingsleyae
ENSACAG00000014490RPA19868.204ENSPSIG00000015617RPA19967.381Pelodiscus_sinensis
ENSACAG00000014490RPA19958.221ENSPMGG00000011589rpa19958.221Periophthalmus_magnuspinnatus
ENSACAG00000014490RPA19953.038ENSPMGG00000000543RPA19953.240Periophthalmus_magnuspinnatus
ENSACAG00000014490RPA19963.592ENSPEMG00000021061Rpa19963.387Peromyscus_maniculatus_bairdii
ENSACAG00000014490RPA19963.974ENSPCIG00000019049RPA19963.489Phascolarctos_cinereus
ENSACAG00000014490RPA19856.911ENSPFOG00000003987rpa19956.423Poecilia_formosa
ENSACAG00000014490RPA19450.080ENSPLAG00000008844-8458.392Poecilia_latipinna
ENSACAG00000014490RPA19857.781ENSPLAG00000004984rpa19956.260Poecilia_latipinna
ENSACAG00000014490RPA19450.720ENSPMEG00000003627-9749.280Poecilia_mexicana
ENSACAG00000014490RPA19856.911ENSPMEG00000020602rpa19956.918Poecilia_mexicana
ENSACAG00000014490RPA18463.200ENSPREG00000010174rpa19663.200Poecilia_reticulata
ENSACAG00000014490RPA19757.543ENSPREG00000010119RPA18458.102Poecilia_reticulata
ENSACAG00000014490RPA19963.328ENSPCOG00000001799RPA19962.520Propithecus_coquereli
ENSACAG00000014490RPA19963.328ENSPVAG00000002149RPA19962.540Pteropus_vampyrus
ENSACAG00000014490RPA19858.843ENSPNYG00000016316rpa19958.348Pundamilia_nyererei
ENSACAG00000014490RPA19951.863ENSPNYG00000024165RPA19951.863Pundamilia_nyererei
ENSACAG00000014490RPA19852.087ENSPNAG00000008599rpa19949.111Pygocentrus_nattereri
ENSACAG00000014490RPA19964.078ENSRNOG00000003123Rpa19963.548Rattus_norvegicus
ENSACAG00000014490RPA19962.682ENSRBIG00000036587RPA19962.520Rhinopithecus_bieti
ENSACAG00000014490RPA19958.158ENSRROG00000043278RPA19957.997Rhinopithecus_roxellana
ENSACAG00000014490RPA19931.100YAR007CRFA17235.683Saccharomyces_cerevisiae
ENSACAG00000014490RPA19063.428ENSSBOG00000030233RPA19762.326Saimiri_boliviensis_boliviensis
ENSACAG00000014490RPA19864.169ENSSHAG00000007969RPA19862.981Sarcophilus_harrisii
ENSACAG00000014490RPA19957.903ENSSFOG00015005362rpa19256.444Scleropages_formosus
ENSACAG00000014490RPA19561.050ENSSMAG00000019746RPA18561.050Scophthalmus_maximus
ENSACAG00000014490RPA19859.867ENSSDUG00000011949rpa19959.370Seriola_dumerili
ENSACAG00000014490RPA19261.521ENSSDUG00000016358RPA18360.265Seriola_dumerili
ENSACAG00000014490RPA19859.536ENSSLDG00000011806rpa19958.872Seriola_lalandi_dorsalis
ENSACAG00000014490RPA19261.609ENSSLDG00000020784RPA18561.312Seriola_lalandi_dorsalis
ENSACAG00000014490RPA19853.048ENSSARG00000007506RPA19952.389Sorex_araneus
ENSACAG00000014490RPA19866.998ENSSPUG00000007223RPA19966.667Sphenodon_punctatus
ENSACAG00000014490RPA19858.043ENSSPAG00000009903rpa19957.546Stegastes_partitus
ENSACAG00000014490RPA19855.236ENSSPAG00000011165RPA19854.822Stegastes_partitus
ENSACAG00000014490RPA19966.945ENSSSCG00000017822RPA19966.611Sus_scrofa
ENSACAG00000014490RPA19966.343ENSTGUG00000005775RPA19966.343Taeniopygia_guttata
ENSACAG00000014490RPA19857.877ENSTRUG00000003616rpa19957.521Takifugu_rubripes
ENSACAG00000014490RPA19559.081ENSTRUG00000000405RPA18059.389Takifugu_rubripes
ENSACAG00000014490RPA19957.212ENSTNIG00000016199rpa19957.938Tetraodon_nigroviridis
ENSACAG00000014490RPA18169.144ENSTBEG00000002709RPA18168.919Tupaia_belangeri
ENSACAG00000014490RPA19963.328ENSTTRG00000001169RPA110063.023Tursiops_truncatus
ENSACAG00000014490RPA18782.692ENSUAMG00000015676RPA19782.692Ursus_americanus
ENSACAG00000014490RPA19965.275ENSUMAG00000009328RPA19964.942Ursus_maritimus
ENSACAG00000014490RPA19862.520ENSVPAG00000009443RPA19961.538Vicugna_pacos
ENSACAG00000014490RPA19963.548ENSVVUG00000021715RPA19962.843Vulpes_vulpes
ENSACAG00000014490RPA19963.399ENSXETG00000013538rpa19963.399Xenopus_tropicalis
ENSACAG00000014490RPA19357.522ENSXCOG00000010068rpa19456.250Xiphophorus_couchianus
ENSACAG00000014490RPA19552.715ENSXCOG00000009899-10052.539Xiphophorus_couchianus
ENSACAG00000014490RPA19757.112ENSXMAG00000010333RPA18157.174Xiphophorus_maculatus
ENSACAG00000014490RPA19857.355ENSXMAG00000004102rpa19956.250Xiphophorus_maculatus

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