EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000014561 (Gene tree)
Gene ID: 100561860
Gene Symbol: POLR2A
Alias: POLR2|POLRA|RPB1
Full Name: RNA polymerase II subunit A
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 28817 bases
Position: chrGL343660.1:94005-122821
Accession: 100561860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000014487	RNA_pol_Rpb1_5	PF04998.17	4.8e-101	1	1
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	1	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	2	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	3	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	4	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	5	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	6	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	7	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	8	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	9	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	10	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	11	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	12	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	13	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	14	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	15	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	16	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	17	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	18	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	19	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	20	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	21	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	22	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	23	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	24	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	25	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	26	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	27	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	28	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	29	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	30	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	31	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	32	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	33	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	34	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	35	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	36	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	37	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	38	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	39	40
ENSACAP00000014487	RNA_pol_Rpb1_R	PF05001.13	6.2e-27	40	40
ENSACAP00000014487	RNA_pol_Rpb1_4	PF05000.17	2.4e-38	1	1
ENSACAP00000014487	RNA_pol_Rpb1_2	PF00623.20	8.4e-75	1	1
ENSACAP00000014487	RNA_pol_Rpb1_3	PF04983.18	2.5e-50	1	1
ENSACAP00000014487	RNA_pol_Rpb1_1	PF04997.12	4e-110	1	1
ENSACAP00000014487	RNA_pol_Rpb1_7	PF04990.12	8.4e-55	1	1
ENSACAP00000014487	RNA_pol_Rpb1_6	PF04992.14	1.1e-68	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000014782	POLR2A-201	7738	XM_003228507	ENSACAP00000014487	1969 (aa)	XP_003228555	H9GLG5

Gene Model

Click here to download ENSACAG00000014561's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000014561's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000014561	POLR2A	62	37.983	ENSACAG00000007985	POLR3A	90	38.377

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000014561	POLR2A	82	94.975	ENSAPOG00000006552	polr2a	91	94.969	Acanthochromis_polyacanthus
ENSACAG00000014561	POLR2A	100	98.226	ENSAMEG00000016265	-	100	98.226	Ailuropoda_melanoleuca
ENSACAG00000014561	POLR2A	82	92.804	ENSACIG00000015982	polr2a	81	92.795	Amphilophus_citrinellus
ENSACAG00000014561	POLR2A	97	92.866	ENSAOCG00000004255	polr2a	96	92.857	Amphiprion_ocellaris
ENSACAG00000014561	POLR2A	82	95.037	ENSAPEG00000012623	polr2a	82	95.031	Amphiprion_percula
ENSACAG00000014561	POLR2A	82	94.727	ENSATEG00000019644	polr2a	82	94.720	Anabas_testudineus
ENSACAG00000014561	POLR2A	100	98.426	ENSANAG00000020093	-	100	98.426	Aotus_nancymaae
ENSACAG00000014561	POLR2A	82	94.479	ENSACLG00000006735	polr2a	82	94.472	Astatotilapia_calliptera
ENSACAG00000014561	POLR2A	82	94.913	ENSAMXG00000020046	polr2a	82	94.907	Astyanax_mexicanus
ENSACAG00000014561	POLR2A	100	98.376	ENSBTAG00000046765	POLR2A	100	98.376	Bos_taurus
ENSACAG00000014561	POLR2A	94	70.332	WBGene00000123	ama-1	99	72.727	Caenorhabditis_elegans
ENSACAG00000014561	POLR2A	100	98.071	ENSCAFG00000016532	POLR2A	100	98.099	Canis_familiaris
ENSACAG00000014561	POLR2A	100	97.615	ENSCAFG00020007929	-	100	97.615	Canis_lupus_dingo
ENSACAG00000014561	POLR2A	100	98.376	ENSCHIG00000027173	-	100	98.376	Capra_hircus
ENSACAG00000014561	POLR2A	100	96.041	ENSTSYG00000012803	-	100	96.497	Carlito_syrichta
ENSACAG00000014561	POLR2A	98	94.219	ENSCAPG00000001882	-	98	96.960	Cavia_aperea
ENSACAG00000014561	POLR2A	100	94.098	ENSCPOG00000014812	-	98	96.770	Cavia_porcellus
ENSACAG00000014561	POLR2A	100	98.426	ENSCCAG00000020938	-	100	98.426	Cebus_capucinus
ENSACAG00000014561	POLR2A	100	98.376	ENSCATG00000013680	-	100	98.376	Cercocebus_atys
ENSACAG00000014561	POLR2A	100	98.274	ENSCLAG00000012196	-	100	98.274	Chinchilla_lanigera
ENSACAG00000014561	POLR2A	82	88.957	ENSCSAG00000011644	-	82	88.957	Chlorocebus_sabaeus
ENSACAG00000014561	POLR2A	100	94.413	ENSCPBG00000012697	POLR2A	100	94.413	Chrysemys_picta_bellii
ENSACAG00000014561	POLR2A	99	76.792	ENSCING00000007884	-	99	77.061	Ciona_intestinalis
ENSACAG00000014561	POLR2A	95	83.333	ENSCSAVG00000008334	-	99	83.871	Ciona_savignyi
ENSACAG00000014561	POLR2A	100	97.716	ENSCANG00000010622	-	100	97.716	Colobus_angolensis_palliatus
ENSACAG00000014561	POLR2A	82	91.641	ENSCGRG00001003538	Polr2a	84	90.239	Cricetulus_griseus_chok1gshd
ENSACAG00000014561	POLR2A	82	94.356	ENSCGRG00000012105	Polr2a	95	94.294	Cricetulus_griseus_crigri
ENSACAG00000014561	POLR2A	82	93.859	ENSCSEG00000002635	polr2a	82	93.851	Cynoglossus_semilaevis
ENSACAG00000014561	POLR2A	82	94.789	ENSCVAG00000005156	polr2a	82	94.783	Cyprinodon_variegatus
ENSACAG00000014561	POLR2A	82	94.544	ENSDARG00000099966	polr2a	82	94.538	Danio_rerio
ENSACAG00000014561	POLR2A	100	95.736	ENSDNOG00000016482	-	100	95.736	Dasypus_novemcinctus
ENSACAG00000014561	POLR2A	100	98.426	ENSDORG00000008667	Polr2a	100	98.426	Dipodomys_ordii
ENSACAG00000014561	POLR2A	99	70.100	FBgn0003277	RpII215	99	75.016	Drosophila_melanogaster
ENSACAG00000014561	POLR2A	94	93.577	ENSETEG00000002540	-	87	94.768	Echinops_telfairi
ENSACAG00000014561	POLR2A	82	87.788	ENSEBUG00000013967	polr2a	82	87.197	Eptatretus_burgeri
ENSACAG00000014561	POLR2A	82	95.965	ENSEASG00005019114	-	83	95.965	Equus_asinus_asinus
ENSACAG00000014561	POLR2A	100	98.376	ENSECAG00000018485	POLR2A	100	98.376	Equus_caballus
ENSACAG00000014561	POLR2A	87	97.864	ENSEEUG00000001154	-	95	97.864	Erinaceus_europaeus
ENSACAG00000014561	POLR2A	89	90.450	ENSELUG00000014284	polr2a	84	90.988	Esox_lucius
ENSACAG00000014561	POLR2A	100	98.477	ENSFDAG00000008287	-	100	98.477	Fukomys_damarensis
ENSACAG00000014561	POLR2A	85	94.727	ENSFHEG00000001768	polr2a	97	94.720	Fundulus_heteroclitus
ENSACAG00000014561	POLR2A	99	90.597	ENSGMOG00000007725	polr2a	99	90.655	Gadus_morhua
ENSACAG00000014561	POLR2A	99	94.366	ENSGAFG00000005389	polr2a	99	92.484	Gambusia_affinis
ENSACAG00000014561	POLR2A	99	91.047	ENSGACG00000019366	polr2a	99	88.539	Gasterosteus_aculeatus
ENSACAG00000014561	POLR2A	100	96.606	ENSGGOG00000014800	-	100	96.606	Gorilla_gorilla
ENSACAG00000014561	POLR2A	85	94.479	ENSHBUG00000018937	polr2a	98	94.472	Haplochromis_burtoni
ENSACAG00000014561	POLR2A	100	98.477	ENSHGLG00000012381	POLR2A	100	98.477	Heterocephalus_glaber_female
ENSACAG00000014561	POLR2A	100	98.477	ENSHGLG00100014843	POLR2A	100	98.477	Heterocephalus_glaber_male
ENSACAG00000014561	POLR2A	82	94.479	ENSHCOG00000011874	polr2a	82	94.472	Hippocampus_comes
ENSACAG00000014561	POLR2A	82	94.293	ENSIPUG00000002613	Polr2a	82	94.286	Ictalurus_punctatus
ENSACAG00000014561	POLR2A	100	98.426	ENSSTOG00000001304	-	100	98.426	Ictidomys_tridecemlineatus
ENSACAG00000014561	POLR2A	100	98.426	ENSJJAG00000013049	Polr2a	100	98.426	Jaculus_jaculus
ENSACAG00000014561	POLR2A	80	85.346	ENSKMAG00000016343	polr2a	86	89.286	Kryptolebias_marmoratus
ENSACAG00000014561	POLR2A	82	94.603	ENSLBEG00000027652	polr2a	82	94.596	Labrus_bergylta
ENSACAG00000014561	POLR2A	80	87.540	ENSLACG00000012071	POLR2A	81	87.595	Latimeria_chalumnae
ENSACAG00000014561	POLR2A	91	95.277	ENSLOCG00000013863	polr2a	99	94.966	Lepisosteus_oculatus
ENSACAG00000014561	POLR2A	100	98.376	ENSLAFG00000008626	-	100	98.376	Loxodonta_africana
ENSACAG00000014561	POLR2A	50	96.221	ENSMFAG00000007042	-	99	96.221	Macaca_fascicularis
ENSACAG00000014561	POLR2A	100	98.376	ENSMMUG00000023620	-	100	98.376	Macaca_mulatta
ENSACAG00000014561	POLR2A	100	97.673	ENSMNEG00000040407	-	100	97.673	Macaca_nemestrina
ENSACAG00000014561	POLR2A	82	92.289	ENSMLEG00000030263	-	99	96.221	Mandrillus_leucophaeus
ENSACAG00000014561	POLR2A	82	94.851	ENSMAMG00000003351	polr2a	82	94.845	Mastacembelus_armatus
ENSACAG00000014561	POLR2A	82	94.479	ENSMZEG00005021429	polr2a	82	94.472	Maylandia_zebra
ENSACAG00000014561	POLR2A	50	98.063	ENSMAUG00000021055	-	99	98.063	Mesocricetus_auratus
ENSACAG00000014561	POLR2A	100	98.376	ENSMICG00000013372	-	100	98.376	Microcebus_murinus
ENSACAG00000014561	POLR2A	100	93.415	ENSMOCG00000018279	Polr2a	100	93.379	Microtus_ochrogaster
ENSACAG00000014561	POLR2A	87	94.355	ENSMMOG00000012515	polr2a	95	94.348	Mola_mola
ENSACAG00000014561	POLR2A	100	98.426	ENSMODG00000007009	-	100	98.426	Monodelphis_domestica
ENSACAG00000014561	POLR2A	94	91.950	ENSMALG00000008716	polr2a	99	92.547	Monopterus_albus
ENSACAG00000014561	POLR2A	100	98.376	MGP_CAROLIEiJ_G0016587	Polr2a	100	98.376	Mus_caroli
ENSACAG00000014561	POLR2A	100	98.376	ENSMUSG00000005198	Polr2a	100	98.376	Mus_musculus
ENSACAG00000014561	POLR2A	100	96.611	MGP_PahariEiJ_G0017718	Polr2a	100	96.611	Mus_pahari
ENSACAG00000014561	POLR2A	100	98.376	MGP_SPRETEiJ_G0017423	Polr2a	100	98.376	Mus_spretus
ENSACAG00000014561	POLR2A	100	98.426	ENSMPUG00000009648	-	100	98.426	Mustela_putorius_furo
ENSACAG00000014561	POLR2A	100	97.921	ENSMLUG00000009088	-	100	97.921	Myotis_lucifugus
ENSACAG00000014561	POLR2A	100	98.426	ENSNGAG00000002543	Polr2a	100	98.426	Nannospalax_galili
ENSACAG00000014561	POLR2A	82	92.370	ENSNBRG00000002005	polr2a	81	92.360	Neolamprologus_brichardi
ENSACAG00000014561	POLR2A	100	97.214	ENSNLEG00000009460	-	100	97.214	Nomascus_leucogenys
ENSACAG00000014561	POLR2A	94	98.148	ENSMEUG00000008611	-	93	98.148	Notamacropus_eugenii
ENSACAG00000014561	POLR2A	80	97.915	ENSOPRG00000015116	-	99	97.915	Ochotona_princeps
ENSACAG00000014561	POLR2A	100	90.881	ENSODEG00000017674	-	100	93.807	Octodon_degus
ENSACAG00000014561	POLR2A	82	94.665	ENSONIG00000009231	polr2a	82	94.658	Oreochromis_niloticus
ENSACAG00000014561	POLR2A	100	95.840	ENSOCUG00000017929	-	100	97.952	Oryctolagus_cuniculus
ENSACAG00000014561	POLR2A	82	94.665	ENSORLG00000006431	polr2a	82	94.658	Oryzias_latipes
ENSACAG00000014561	POLR2A	82	94.665	ENSORLG00020010235	polr2a	82	94.658	Oryzias_latipes_hni
ENSACAG00000014561	POLR2A	82	94.665	ENSORLG00015007075	polr2a	82	94.658	Oryzias_latipes_hsok
ENSACAG00000014561	POLR2A	92	94.776	ENSOMEG00000010713	polr2a	100	94.776	Oryzias_melastigma
ENSACAG00000014561	POLR2A	100	98.426	ENSOGAG00000033608	-	100	98.426	Otolemur_garnettii
ENSACAG00000014561	POLR2A	98	98.148	ENSOARG00000013874	-	100	98.148	Ovis_aries
ENSACAG00000014561	POLR2A	93	95.253	ENSPPAG00000043734	-	100	95.888	Pan_paniscus
ENSACAG00000014561	POLR2A	100	97.214	ENSPTRG00000008691	POLR2A	100	97.214	Pan_troglodytes
ENSACAG00000014561	POLR2A	100	97.716	ENSPANG00000024099	-	100	97.716	Papio_anubis
ENSACAG00000014561	POLR2A	77	93.259	ENSPKIG00000005727	polr2a	85	84.663	Paramormyrops_kingsleyae
ENSACAG00000014561	POLR2A	98	97.145	ENSPSIG00000014006	POLR2A	100	97.145	Pelodiscus_sinensis
ENSACAG00000014561	POLR2A	100	94.465	ENSPMGG00000019734	polr2a	99	94.907	Periophthalmus_magnuspinnatus
ENSACAG00000014561	POLR2A	100	98.426	ENSPEMG00000012521	Polr2a	100	98.426	Peromyscus_maniculatus_bairdii
ENSACAG00000014561	POLR2A	96	86.156	ENSPCIG00000028851	-	96	86.156	Phascolarctos_cinereus
ENSACAG00000014561	POLR2A	85	94.727	ENSPFOG00000007890	polr2a	99	94.720	Poecilia_formosa
ENSACAG00000014561	POLR2A	85	94.727	ENSPLAG00000007399	polr2a	99	94.720	Poecilia_latipinna
ENSACAG00000014561	POLR2A	85	94.727	ENSPMEG00000002071	polr2a	99	94.720	Poecilia_mexicana
ENSACAG00000014561	POLR2A	82	94.665	ENSPREG00000013122	polr2a	82	94.658	Poecilia_reticulata
ENSACAG00000014561	POLR2A	100	95.233	ENSPPYG00000007924	-	100	97.363	Pongo_abelii
ENSACAG00000014561	POLR2A	92	98.000	ENSPCAG00000006951	-	92	98.000	Procavia_capensis
ENSACAG00000014561	POLR2A	100	97.280	ENSPCOG00000025260	-	100	97.280	Propithecus_coquereli
ENSACAG00000014561	POLR2A	100	98.223	ENSPVAG00000005069	-	100	98.223	Pteropus_vampyrus
ENSACAG00000014561	POLR2A	83	94.774	ENSPNYG00000022340	polr2a	82	94.534	Pundamilia_nyererei
ENSACAG00000014561	POLR2A	82	94.851	ENSPNAG00000011237	polr2a	82	94.845	Pygocentrus_nattereri
ENSACAG00000014561	POLR2A	100	98.426	ENSRNOG00000028834	Polr2a	100	98.426	Rattus_norvegicus
ENSACAG00000014561	POLR2A	82	97.641	ENSRBIG00000002471	-	100	95.025	Rhinopithecus_bieti
ENSACAG00000014561	POLR2A	100	98.020	ENSRROG00000029583	-	100	98.020	Rhinopithecus_roxellana
ENSACAG00000014561	POLR2A	82	88.000	YDL140C	RPO21	99	80.180	Saccharomyces_cerevisiae
ENSACAG00000014561	POLR2A	100	98.426	ENSSBOG00000000808	-	100	98.426	Saimiri_boliviensis_boliviensis
ENSACAG00000014561	POLR2A	92	98.076	ENSSHAG00000002858	-	100	95.939	Sarcophilus_harrisii
ENSACAG00000014561	POLR2A	82	94.975	ENSSFOG00015023275	polr2a	82	94.969	Scleropages_formosus
ENSACAG00000014561	POLR2A	82	94.231	ENSSMAG00000009137	polr2a	82	94.224	Scophthalmus_maximus
ENSACAG00000014561	POLR2A	82	95.037	ENSSDUG00000020466	polr2a	82	95.031	Seriola_dumerili
ENSACAG00000014561	POLR2A	82	95.037	ENSSLDG00000020613	polr2a	82	95.031	Seriola_lalandi_dorsalis
ENSACAG00000014561	POLR2A	97	93.421	ENSSARG00000005875	-	99	93.421	Sorex_araneus
ENSACAG00000014561	POLR2A	100	94.975	ENSSPAG00000016741	polr2a	94	94.969	Stegastes_partitus
ENSACAG00000014561	POLR2A	100	97.665	ENSSSCG00000028278	-	100	97.665	Sus_scrofa
ENSACAG00000014561	POLR2A	99	89.089	ENSTRUG00000012320	polr2a	81	89.075	Takifugu_rubripes
ENSACAG00000014561	POLR2A	99	93.424	ENSTNIG00000010136	polr2a	100	93.416	Tetraodon_nigroviridis
ENSACAG00000014561	POLR2A	74	98.980	ENSTBEG00000013294	-	58	98.980	Tupaia_belangeri
ENSACAG00000014561	POLR2A	100	96.954	ENSTTRG00000014273	-	100	96.954	Tursiops_truncatus
ENSACAG00000014561	POLR2A	96	95.170	ENSUAMG00000014866	-	100	97.771	Ursus_americanus
ENSACAG00000014561	POLR2A	99	96.292	ENSUMAG00000015732	-	100	96.292	Ursus_maritimus
ENSACAG00000014561	POLR2A	65	100.000	ENSVPAG00000008842	-	76	100.000	Vicugna_pacos
ENSACAG00000014561	POLR2A	100	95.134	ENSVVUG00000027878	-	100	97.056	Vulpes_vulpes
ENSACAG00000014561	POLR2A	99	97.382	ENSXETG00000012465	polr2a	100	97.382	Xenopus_tropicalis
ENSACAG00000014561	POLR2A	93	92.432	ENSXCOG00000001804	polr2a	94	92.422	Xiphophorus_couchianus
ENSACAG00000014561	POLR2A	82	94.665	ENSXMAG00000015687	polr2a	82	94.658	Xiphophorus_maculatus