EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000014733 (Gene tree)
Gene ID: 100560136
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 15009 bases
Position: chrGL343273.1:747733-762741
Accession: 100560136
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000014468	MBD	PF01429.19	6.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000014763	MBD4-201	3977	XM_008116993	ENSACAP00000014468	553 (aa)	XP_008115200	H9GLF6

Gene Model

Click here to download ENSACAG00000014733's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000014733's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000014733	MBD4	70	78.857	ENSCLAG00000008974	MBD4	70	78.857	Chinchilla_lanigera
ENSACAG00000014733	MBD4	92	50.272	ENSCPBG00000014704	MBD4	92	50.272	Chrysemys_picta_bellii
ENSACAG00000014733	MBD4	89	44.902	ENSDNOG00000049619	MBD4	87	44.902	Dasypus_novemcinctus
ENSACAG00000014733	MBD4	84	45.773	ENSFALG00000013663	MBD4	100	45.709	Ficedula_albicollis
ENSACAG00000014733	MBD4	92	51.532	ENSGAGG00000018644	MBD4	92	51.532	Gopherus_agassizii
ENSACAG00000014733	MBD4	69	79.769	ENSHGLG00000009034	MBD4	69	79.769	Heterocephalus_glaber_female
ENSACAG00000014733	MBD4	69	79.769	ENSHGLG00100000135	MBD4	69	79.769	Heterocephalus_glaber_male
ENSACAG00000014733	MBD4	90	45.000	ENSSTOG00000020663	MBD4	88	45.000	Ictidomys_tridecemlineatus
ENSACAG00000014733	MBD4	59	70.879	ENSLBEG00000005669	MBD4	62	70.879	Labrus_bergylta
ENSACAG00000014733	MBD4	90	42.286	MGP_SPRETEiJ_G0029788	Mbd4	89	42.286	Mus_spretus
ENSACAG00000014733	MBD4	89	46.065	ENSMPUG00000017195	MBD4	86	46.065	Mustela_putorius_furo
ENSACAG00000014733	MBD4	89	44.190	ENSMLUG00000014766	MBD4	91	44.190	Myotis_lucifugus
ENSACAG00000014733	MBD4	89	41.811	ENSOPRG00000000473	MBD4	87	41.811	Ochotona_princeps
ENSACAG00000014733	MBD4	58	78.363	ENSONIG00000017212	mbd4	72	78.363	Oreochromis_niloticus
ENSACAG00000014733	MBD4	69	37.500	ENSOANG00000004589	-	89	37.500	Ornithorhynchus_anatinus
ENSACAG00000014733	MBD4	88	40.840	ENSOCUG00000013006	MBD4	86	40.840	Oryctolagus_cuniculus
ENSACAG00000014733	MBD4	54	79.290	ENSOMEG00000008819	mbd4	65	79.290	Oryzias_melastigma
ENSACAG00000014733	MBD4	56	76.374	ENSOGAG00000010236	MBD4	58	76.374	Otolemur_garnettii
ENSACAG00000014733	MBD4	98	47.157	ENSPSIG00000007892	MBD4	97	47.157	Pelodiscus_sinensis
ENSACAG00000014733	MBD4	56	76.364	ENSPCAG00000012915	MBD4	85	43.164	Procavia_capensis
ENSACAG00000014733	MBD4	55	78.107	ENSSMAG00000013958	-	68	41.717	Scophthalmus_maximus
ENSACAG00000014733	MBD4	93	48.282	ENSSPUG00000017344	MBD4	96	48.282	Sphenodon_punctatus
ENSACAG00000014733	MBD4	88	45.142	ENSXETG00000026622	mbd4	90	45.142	Xenopus_tropicalis