EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000014817 (Gene tree)
Gene ID: 100554682
Gene Symbol: RTCB
Alias: C22orf28|FAAP|HSPC117
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 15271 bases
Position: chr5:19880643-19895913
Accession: 100554682
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000014616	RtcB	PF01139.17	2.2e-145	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000014912	RTCB-201	5264	XM_003220927	ENSACAP00000014616	519 (aa)	XP_003220975	G1KQE8

Gene Model

Click here to download ENSACAG00000014817's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000014817's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000014817	RTCB	100	93.834	ENSG00000100220	RTCB	100	93.834	Homo_sapiens
ENSACAG00000014817	RTCB	100	91.329	ENSAPOG00000006040	rtcb	100	91.329	Acanthochromis_polyacanthus
ENSACAG00000014817	RTCB	100	93.642	ENSAMEG00000016152	RTCB	100	93.642	Ailuropoda_melanoleuca
ENSACAG00000014817	RTCB	100	86.898	ENSACIG00000009083	rtcb	100	86.898	Amphilophus_citrinellus
ENSACAG00000014817	RTCB	100	91.522	ENSAOCG00000005662	rtcb	100	94.783	Amphiprion_ocellaris
ENSACAG00000014817	RTCB	96	87.000	ENSAPEG00000024653	rtcb	100	87.000	Amphiprion_percula
ENSACAG00000014817	RTCB	100	91.522	ENSAPEG00000024701	rtcb	100	91.522	Amphiprion_percula
ENSACAG00000014817	RTCB	100	91.522	ENSATEG00000000618	rtcb	100	91.522	Anabas_testudineus
ENSACAG00000014817	RTCB	73	94.444	ENSANAG00000023724	-	100	58.846	Aotus_nancymaae
ENSACAG00000014817	RTCB	100	78.420	ENSANAG00000018191	-	91	78.420	Aotus_nancymaae
ENSACAG00000014817	RTCB	100	90.366	ENSACLG00000008367	rtcb	100	93.913	Astatotilapia_calliptera
ENSACAG00000014817	RTCB	100	91.329	ENSAMXG00000042320	rtcb	100	91.329	Astyanax_mexicanus
ENSACAG00000014817	RTCB	100	93.834	ENSBTAG00000011070	RTCB	100	93.834	Bos_taurus
ENSACAG00000014817	RTCB	100	72.254	WBGene00008877	rtcb-1	100	72.254	Caenorhabditis_elegans
ENSACAG00000014817	RTCB	100	93.449	ENSCJAG00000006128	RTCB	100	93.449	Callithrix_jacchus
ENSACAG00000014817	RTCB	100	93.642	ENSCAFG00000001785	RTCB	100	93.642	Canis_familiaris
ENSACAG00000014817	RTCB	100	89.595	ENSCAFG00000010789	-	100	89.595	Canis_familiaris
ENSACAG00000014817	RTCB	100	93.642	ENSCAFG00020004890	-	100	93.642	Canis_lupus_dingo
ENSACAG00000014817	RTCB	87	89.648	ENSCAFG00020018953	-	99	89.648	Canis_lupus_dingo
ENSACAG00000014817	RTCB	100	93.834	ENSCHIG00000027009	-	100	93.834	Capra_hircus
ENSACAG00000014817	RTCB	100	93.834	ENSTSYG00000012320	RTCB	100	93.834	Carlito_syrichta
ENSACAG00000014817	RTCB	92	96.849	ENSCAPG00000011647	RTCB	96	96.849	Cavia_aperea
ENSACAG00000014817	RTCB	100	93.449	ENSCCAG00000000618	RTCB	100	93.449	Cebus_capucinus
ENSACAG00000014817	RTCB	100	93.642	ENSCATG00000033424	RTCB	100	93.642	Cercocebus_atys
ENSACAG00000014817	RTCB	100	94.027	ENSCLAG00000007997	RTCB	100	94.027	Chinchilla_lanigera
ENSACAG00000014817	RTCB	100	93.449	ENSCSAG00000008351	RTCB	100	93.449	Chlorocebus_sabaeus
ENSACAG00000014817	RTCB	100	79.961	ENSCHOG00000009123	RTCB	100	79.961	Choloepus_hoffmanni
ENSACAG00000014817	RTCB	100	94.220	ENSCPBG00000023184	RTCB	100	94.220	Chrysemys_picta_bellii
ENSACAG00000014817	RTCB	100	80.347	ENSCING00000003830	-	100	80.347	Ciona_intestinalis
ENSACAG00000014817	RTCB	100	80.732	ENSCSAVG00000008124	-	100	81.549	Ciona_savignyi
ENSACAG00000014817	RTCB	100	90.173	ENSCANG00000001891	RTCB	100	90.173	Colobus_angolensis_palliatus
ENSACAG00000014817	RTCB	100	93.642	ENSCGRG00001011173	Rtcb	100	93.642	Cricetulus_griseus_chok1gshd
ENSACAG00000014817	RTCB	91	96.603	ENSCGRG00000009587	-	96	96.603	Cricetulus_griseus_crigri
ENSACAG00000014817	RTCB	100	90.366	ENSCSEG00000003986	rtcb	100	90.366	Cynoglossus_semilaevis
ENSACAG00000014817	RTCB	80	93.269	ENSCVAG00000000569	rtcb	95	93.269	Cyprinodon_variegatus
ENSACAG00000014817	RTCB	100	91.329	ENSDARG00000101047	rtcb	100	91.329	Danio_rerio
ENSACAG00000014817	RTCB	81	90.261	ENSDNOG00000012425	RTCB	99	90.261	Dasypus_novemcinctus
ENSACAG00000014817	RTCB	100	94.220	ENSDORG00000010855	Rtcb	100	94.220	Dipodomys_ordii
ENSACAG00000014817	RTCB	99	83.366	FBgn0032781	RtcB	99	83.366	Drosophila_melanogaster
ENSACAG00000014817	RTCB	100	88.054	ENSETEG00000001988	RTCB	100	88.054	Echinops_telfairi
ENSACAG00000014817	RTCB	100	82.852	ENSEBUG00000014235	rtcb	100	82.852	Eptatretus_burgeri
ENSACAG00000014817	RTCB	100	94.027	ENSEASG00005019059	RTCB	100	94.027	Equus_asinus_asinus
ENSACAG00000014817	RTCB	100	94.027	ENSECAG00000023998	RTCB	100	94.027	Equus_caballus
ENSACAG00000014817	RTCB	86	88.117	ENSEEUG00000006251	RTCB	99	88.117	Erinaceus_europaeus
ENSACAG00000014817	RTCB	100	80.110	ENSELUG00000009275	rtcb	100	80.110	Esox_lucius
ENSACAG00000014817	RTCB	100	93.834	ENSFCAG00000026480	RTCB	100	93.834	Felis_catus
ENSACAG00000014817	RTCB	100	94.605	ENSFALG00000013334	RTCB	100	94.605	Ficedula_albicollis
ENSACAG00000014817	RTCB	100	93.642	ENSFDAG00000018150	RTCB	100	93.642	Fukomys_damarensis
ENSACAG00000014817	RTCB	100	91.137	ENSFHEG00000009595	rtcb	100	91.137	Fundulus_heteroclitus
ENSACAG00000014817	RTCB	100	88.825	ENSGMOG00000018882	rtcb	100	88.825	Gadus_morhua
ENSACAG00000014817	RTCB	100	94.798	ENSGALG00000012611	RTCB	100	94.798	Gallus_gallus
ENSACAG00000014817	RTCB	100	91.522	ENSGAFG00000004198	rtcb	100	91.522	Gambusia_affinis
ENSACAG00000014817	RTCB	100	89.981	ENSGACG00000000586	rtcb	100	89.981	Gasterosteus_aculeatus
ENSACAG00000014817	RTCB	93	92.769	ENSGAGG00000019133	RTCB	98	92.769	Gopherus_agassizii
ENSACAG00000014817	RTCB	100	93.834	ENSGGOG00000011402	RTCB	100	93.834	Gorilla_gorilla
ENSACAG00000014817	RTCB	100	90.366	ENSHBUG00000020571	rtcb	100	90.366	Haplochromis_burtoni
ENSACAG00000014817	RTCB	100	93.642	ENSHGLG00000004492	RTCB	100	93.642	Heterocephalus_glaber_female
ENSACAG00000014817	RTCB	91	68.432	ENSHGLG00000001066	-	99	68.432	Heterocephalus_glaber_female
ENSACAG00000014817	RTCB	100	93.642	ENSHGLG00100008965	RTCB	100	93.642	Heterocephalus_glaber_male
ENSACAG00000014817	RTCB	100	89.443	ENSHCOG00000006450	rtcb	100	89.443	Hippocampus_comes
ENSACAG00000014817	RTCB	100	91.522	ENSIPUG00000015443	rtcb	100	91.522	Ictalurus_punctatus
ENSACAG00000014817	RTCB	100	93.642	ENSSTOG00000003878	RTCB	100	93.642	Ictidomys_tridecemlineatus
ENSACAG00000014817	RTCB	100	93.642	ENSJJAG00000010667	Rtcb	100	93.642	Jaculus_jaculus
ENSACAG00000014817	RTCB	100	91.329	ENSKMAG00000013178	rtcb	100	91.329	Kryptolebias_marmoratus
ENSACAG00000014817	RTCB	100	90.751	ENSLBEG00000010566	RTCB	100	90.751	Labrus_bergylta
ENSACAG00000014817	RTCB	100	89.788	ENSLBEG00000000214	rtcb	100	89.788	Labrus_bergylta
ENSACAG00000014817	RTCB	100	92.678	ENSLACG00000013033	RTCB	100	92.678	Latimeria_chalumnae
ENSACAG00000014817	RTCB	100	91.329	ENSLOCG00000016515	rtcb	99	91.329	Lepisosteus_oculatus
ENSACAG00000014817	RTCB	100	93.256	ENSLAFG00000002082	RTCB	100	93.256	Loxodonta_africana
ENSACAG00000014817	RTCB	100	93.449	ENSMFAG00000034419	RTCB	100	93.449	Macaca_fascicularis
ENSACAG00000014817	RTCB	100	93.449	ENSMMUG00000006720	RTCB	100	93.449	Macaca_mulatta
ENSACAG00000014817	RTCB	100	93.449	ENSMNEG00000040669	RTCB	100	93.449	Macaca_nemestrina
ENSACAG00000014817	RTCB	100	93.642	ENSMLEG00000040505	RTCB	100	93.642	Mandrillus_leucophaeus
ENSACAG00000014817	RTCB	100	91.715	ENSMAMG00000020676	rtcb	100	91.715	Mastacembelus_armatus
ENSACAG00000014817	RTCB	100	90.366	ENSMZEG00005018942	rtcb	100	90.366	Maylandia_zebra
ENSACAG00000014817	RTCB	100	94.434	ENSMGAG00000012805	RTCB	100	94.434	Meleagris_gallopavo
ENSACAG00000014817	RTCB	58	98.230	ENSMAUG00000008301	Rtcb	100	98.230	Mesocricetus_auratus
ENSACAG00000014817	RTCB	100	93.642	ENSMICG00000013303	-	100	93.642	Microcebus_murinus
ENSACAG00000014817	RTCB	100	74.952	ENSMICG00000036677	-	100	74.952	Microcebus_murinus
ENSACAG00000014817	RTCB	100	93.642	ENSMOCG00000002440	Rtcb	100	93.642	Microtus_ochrogaster
ENSACAG00000014817	RTCB	100	90.944	ENSMMOG00000005987	rtcb	100	90.944	Mola_mola
ENSACAG00000014817	RTCB	100	94.605	ENSMODG00000001414	RTCB	100	94.605	Monodelphis_domestica
ENSACAG00000014817	RTCB	100	90.944	ENSMALG00000007603	rtcb	100	90.944	Monopterus_albus
ENSACAG00000014817	RTCB	100	93.642	MGP_CAROLIEiJ_G0015689	Rtcb	100	93.642	Mus_caroli
ENSACAG00000014817	RTCB	100	93.642	ENSMUSG00000001783	Rtcb	100	93.642	Mus_musculus
ENSACAG00000014817	RTCB	100	93.642	MGP_PahariEiJ_G0031396	Rtcb	100	93.642	Mus_pahari
ENSACAG00000014817	RTCB	100	93.642	MGP_SPRETEiJ_G0016507	Rtcb	100	93.642	Mus_spretus
ENSACAG00000014817	RTCB	100	93.642	ENSMPUG00000012285	RTCB	100	93.642	Mustela_putorius_furo
ENSACAG00000014817	RTCB	100	91.715	ENSMLUG00000007803	RTCB	100	91.715	Myotis_lucifugus
ENSACAG00000014817	RTCB	78	85.855	ENSNGAG00000005093	Rtcb	100	85.855	Nannospalax_galili
ENSACAG00000014817	RTCB	100	90.366	ENSNBRG00000017202	rtcb	100	90.366	Neolamprologus_brichardi
ENSACAG00000014817	RTCB	100	93.834	ENSNLEG00000004960	RTCB	100	93.834	Nomascus_leucogenys
ENSACAG00000014817	RTCB	100	69.557	ENSMEUG00000007809	-	100	69.557	Notamacropus_eugenii
ENSACAG00000014817	RTCB	74	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSACAG00000014817	RTCB	100	62.620	ENSODEG00000005042	-	100	62.620	Octodon_degus
ENSACAG00000014817	RTCB	80	98.113	ENSODEG00000013033	-	100	98.113	Octodon_degus
ENSACAG00000014817	RTCB	100	91.329	ENSONIG00000007474	rtcb	100	91.329	Oreochromis_niloticus
ENSACAG00000014817	RTCB	100	94.220	ENSOANG00000005524	RTCB	100	94.220	Ornithorhynchus_anatinus
ENSACAG00000014817	RTCB	93	93.388	ENSOCUG00000008270	RTCB	96	93.388	Oryctolagus_cuniculus
ENSACAG00000014817	RTCB	100	90.944	ENSORLG00000020093	rtcb	100	90.944	Oryzias_latipes
ENSACAG00000014817	RTCB	100	90.944	ENSORLG00020003706	rtcb	99	94.316	Oryzias_latipes_hni
ENSACAG00000014817	RTCB	100	91.137	ENSORLG00015002968	rtcb	100	91.137	Oryzias_latipes_hsok
ENSACAG00000014817	RTCB	100	90.751	ENSOMEG00000021278	rtcb	100	90.751	Oryzias_melastigma
ENSACAG00000014817	RTCB	100	93.064	ENSOGAG00000001425	RTCB	100	93.064	Otolemur_garnettii
ENSACAG00000014817	RTCB	100	93.834	ENSOARG00000018008	RTCB	100	93.834	Ovis_aries
ENSACAG00000014817	RTCB	100	93.834	ENSPPAG00000028667	RTCB	100	93.834	Pan_paniscus
ENSACAG00000014817	RTCB	100	93.834	ENSPPRG00000004038	RTCB	100	93.834	Panthera_pardus
ENSACAG00000014817	RTCB	92	92.211	ENSPTIG00000020499	RTCB	97	93.263	Panthera_tigris_altaica
ENSACAG00000014817	RTCB	100	93.834	ENSPTRG00000014287	RTCB	100	93.834	Pan_troglodytes
ENSACAG00000014817	RTCB	100	93.449	ENSPANG00000016035	RTCB	100	93.449	Papio_anubis
ENSACAG00000014817	RTCB	100	90.366	ENSPKIG00000001881	rtcb	100	90.366	Paramormyrops_kingsleyae
ENSACAG00000014817	RTCB	89	97.174	ENSPSIG00000011690	RTCB	100	97.174	Pelodiscus_sinensis
ENSACAG00000014817	RTCB	100	91.329	ENSPMGG00000016672	rtcb	100	91.329	Periophthalmus_magnuspinnatus
ENSACAG00000014817	RTCB	100	93.642	ENSPEMG00000019548	Rtcb	100	93.642	Peromyscus_maniculatus_bairdii
ENSACAG00000014817	RTCB	100	88.439	ENSPMAG00000005657	rtcb	100	88.439	Petromyzon_marinus
ENSACAG00000014817	RTCB	100	94.220	ENSPCIG00000009467	RTCB	100	94.220	Phascolarctos_cinereus
ENSACAG00000014817	RTCB	100	91.715	ENSPFOG00000003058	rtcb	100	91.715	Poecilia_formosa
ENSACAG00000014817	RTCB	100	91.715	ENSPLAG00000017663	rtcb	100	91.715	Poecilia_latipinna
ENSACAG00000014817	RTCB	100	91.715	ENSPMEG00000006227	rtcb	100	91.715	Poecilia_mexicana
ENSACAG00000014817	RTCB	100	91.522	ENSPREG00000018467	rtcb	100	91.522	Poecilia_reticulata
ENSACAG00000014817	RTCB	100	93.834	ENSPPYG00000011752	RTCB	100	93.834	Pongo_abelii
ENSACAG00000014817	RTCB	93	76.543	ENSPCAG00000013641	RTCB	100	76.543	Procavia_capensis
ENSACAG00000014817	RTCB	100	93.642	ENSPCOG00000017243	RTCB	100	93.642	Propithecus_coquereli
ENSACAG00000014817	RTCB	93	92.769	ENSPVAG00000002380	RTCB	100	92.769	Pteropus_vampyrus
ENSACAG00000014817	RTCB	100	90.366	ENSPNYG00000022760	rtcb	100	90.366	Pundamilia_nyererei
ENSACAG00000014817	RTCB	100	91.329	ENSPNAG00000009209	rtcb	100	91.329	Pygocentrus_nattereri
ENSACAG00000014817	RTCB	100	93.642	ENSRNOG00000004813	Rtcb	100	93.642	Rattus_norvegicus
ENSACAG00000014817	RTCB	100	85.192	ENSRBIG00000042090	RTCB	100	85.192	Rhinopithecus_bieti
ENSACAG00000014817	RTCB	100	89.017	ENSSBOG00000020085	-	100	89.017	Saimiri_boliviensis_boliviensis
ENSACAG00000014817	RTCB	91	97.468	ENSSHAG00000016277	RTCB	100	97.468	Sarcophilus_harrisii
ENSACAG00000014817	RTCB	100	89.981	ENSSFOG00015000763	rtcb	100	89.981	Scleropages_formosus
ENSACAG00000014817	RTCB	100	90.751	ENSSFOG00015011572	RTCB	100	90.751	Scleropages_formosus
ENSACAG00000014817	RTCB	100	88.054	ENSSMAG00000005096	rtcb	100	88.054	Scophthalmus_maximus
ENSACAG00000014817	RTCB	100	90.751	ENSSDUG00000012605	rtcb	100	90.751	Seriola_dumerili
ENSACAG00000014817	RTCB	100	90.751	ENSSLDG00000019458	rtcb	100	90.751	Seriola_lalandi_dorsalis
ENSACAG00000014817	RTCB	64	97.143	ENSSARG00000004799	-	70	97.143	Sorex_araneus
ENSACAG00000014817	RTCB	100	94.220	ENSSPUG00000012814	RTCB	100	94.220	Sphenodon_punctatus
ENSACAG00000014817	RTCB	100	91.522	ENSSPAG00000004623	rtcb	100	91.522	Stegastes_partitus
ENSACAG00000014817	RTCB	100	93.834	ENSSSCG00000000158	RTCB	100	93.834	Sus_scrofa
ENSACAG00000014817	RTCB	100	94.605	ENSTGUG00000010947	RTCB	99	94.605	Taeniopygia_guttata
ENSACAG00000014817	RTCB	89	94.348	ENSTRUG00000009880	rtcb	100	94.348	Takifugu_rubripes
ENSACAG00000014817	RTCB	100	89.981	ENSTNIG00000002484	rtcb	100	89.981	Tetraodon_nigroviridis
ENSACAG00000014817	RTCB	100	81.503	ENSTBEG00000004418	RTCB	100	81.503	Tupaia_belangeri
ENSACAG00000014817	RTCB	93	92.975	ENSTTRG00000006417	RTCB	100	92.975	Tursiops_truncatus
ENSACAG00000014817	RTCB	100	93.642	ENSUAMG00000022792	RTCB	100	93.642	Ursus_americanus
ENSACAG00000014817	RTCB	100	93.642	ENSUMAG00000017225	RTCB	100	93.642	Ursus_maritimus
ENSACAG00000014817	RTCB	100	93.642	ENSVPAG00000005375	RTCB	100	93.642	Vicugna_pacos
ENSACAG00000014817	RTCB	100	93.642	ENSVVUG00000023408	RTCB	100	97.052	Vulpes_vulpes
ENSACAG00000014817	RTCB	100	91.715	ENSXETG00000011523	rtcb	100	91.715	Xenopus_tropicalis
ENSACAG00000014817	RTCB	100	91.329	ENSXMAG00000002855	rtcb	100	91.329	Xiphophorus_maculatus