EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000015110 (Gene tree)
Gene ID: 100560160
Gene Symbol: PRPF4
Alias: HPRP4|HPRP4P|PRP4|Prp4p|SNRNP60
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 25138 bases
Position: chrGL344086.1:7614-32751
Accession: 100560160
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000014914	PRP4	PF08799.11	3.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000015217	PRPF4-201	2154	XM_008123929	ENSACAP00000014914	521 (aa)	XP_008122136	H9GM00

Gene Model

Click here to download ENSACAG00000015110's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000015110's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000015110	PRPF4	56	34.400	ENSACAG00000012119	-	64	34.400

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000015110	PRPF4	100	90.249	ENSG00000136875	PRPF4	100	90.249	Homo_sapiens
ENSACAG00000015110	PRPF4	97	76.701	ENSAPOG00000014132	prpf4	99	76.701	Acanthochromis_polyacanthus
ENSACAG00000015110	PRPF4	100	90.057	ENSAMEG00000013048	PRPF4	98	90.057	Ailuropoda_melanoleuca
ENSACAG00000015110	PRPF4	98	76.125	ENSACIG00000005579	prpf4	99	76.125	Amphilophus_citrinellus
ENSACAG00000015110	PRPF4	98	75.000	ENSAOCG00000005457	prpf4	99	75.000	Amphiprion_ocellaris
ENSACAG00000015110	PRPF4	98	74.805	ENSAPEG00000000776	prpf4	99	74.805	Amphiprion_percula
ENSACAG00000015110	PRPF4	97	76.125	ENSATEG00000023013	prpf4	99	76.125	Anabas_testudineus
ENSACAG00000015110	PRPF4	98	91.406	ENSAPLG00000006534	PRPF4	95	91.406	Anas_platyrhynchos
ENSACAG00000015110	PRPF4	100	90.057	ENSANAG00000022464	PRPF4	96	90.057	Aotus_nancymaae
ENSACAG00000015110	PRPF4	98	74.951	ENSACLG00000019031	prpf4	99	74.951	Astatotilapia_calliptera
ENSACAG00000015110	PRPF4	97	61.450	ENSAMXG00000006756	prpf4	99	73.031	Astyanax_mexicanus
ENSACAG00000015110	PRPF4	100	89.675	ENSBTAG00000004571	PRPF4	100	89.675	Bos_taurus
ENSACAG00000015110	PRPF4	84	46.591	WBGene00007972	prp-4	89	46.591	Caenorhabditis_elegans
ENSACAG00000015110	PRPF4	100	89.695	ENSCJAG00000017856	PRPF4	100	89.695	Callithrix_jacchus
ENSACAG00000015110	PRPF4	100	89.866	ENSCAFG00000003224	PRPF4	97	89.866	Canis_familiaris
ENSACAG00000015110	PRPF4	100	89.866	ENSCAFG00020022637	PRPF4	100	89.866	Canis_lupus_dingo
ENSACAG00000015110	PRPF4	100	89.504	ENSCHIG00000024648	-	100	89.504	Capra_hircus
ENSACAG00000015110	PRPF4	100	89.866	ENSTSYG00000010366	PRPF4	100	89.866	Carlito_syrichta
ENSACAG00000015110	PRPF4	80	82.898	ENSCAPG00000008935	PRPF4	97	82.898	Cavia_aperea
ENSACAG00000015110	PRPF4	100	89.675	ENSCPOG00000010747	-	100	89.675	Cavia_porcellus
ENSACAG00000015110	PRPF4	100	83.939	ENSCPOG00000014729	-	100	83.939	Cavia_porcellus
ENSACAG00000015110	PRPF4	100	90.249	ENSCCAG00000028990	PRPF4	100	90.249	Cebus_capucinus
ENSACAG00000015110	PRPF4	100	88.910	ENSCATG00000021552	PRPF4	100	89.866	Cercocebus_atys
ENSACAG00000015110	PRPF4	100	89.866	ENSCLAG00000013448	PRPF4	100	89.866	Chinchilla_lanigera
ENSACAG00000015110	PRPF4	87	90.929	ENSCHOG00000007233	PRPF4	100	90.929	Choloepus_hoffmanni
ENSACAG00000015110	PRPF4	98	91.211	ENSCPBG00000019136	PRPF4	73	91.211	Chrysemys_picta_bellii
ENSACAG00000015110	PRPF4	94	59.155	ENSCING00000001299	-	95	59.155	Ciona_intestinalis
ENSACAG00000015110	PRPF4	95	58.871	ENSCSAVG00000009178	-	99	59.785	Ciona_savignyi
ENSACAG00000015110	PRPF4	100	90.057	ENSCANG00000003246	PRPF4	100	90.057	Colobus_angolensis_palliatus
ENSACAG00000015110	PRPF4	100	89.675	ENSCGRG00001016992	Prpf4	100	89.675	Cricetulus_griseus_chok1gshd
ENSACAG00000015110	PRPF4	100	89.675	ENSCGRG00000017560	Prpf4	100	89.675	Cricetulus_griseus_crigri
ENSACAG00000015110	PRPF4	98	75.442	ENSCSEG00000020451	prpf4	99	75.442	Cynoglossus_semilaevis
ENSACAG00000015110	PRPF4	97	78.937	ENSDARG00000067639	prpf4	99	78.937	Danio_rerio
ENSACAG00000015110	PRPF4	100	89.695	ENSDNOG00000013203	PRPF4	100	89.695	Dasypus_novemcinctus
ENSACAG00000015110	PRPF4	100	90.440	ENSDORG00000026275	Prpf4	100	90.440	Dipodomys_ordii
ENSACAG00000015110	PRPF4	86	56.637	FBgn0036733	U4-U6-60K	97	50.560	Drosophila_melanogaster
ENSACAG00000015110	PRPF4	100	88.571	ENSETEG00000020389	PRPF4	100	88.571	Echinops_telfairi
ENSACAG00000015110	PRPF4	97	72.360	ENSEBUG00000015229	prpf4	88	72.809	Eptatretus_burgeri
ENSACAG00000015110	PRPF4	100	90.057	ENSEASG00005022678	PRPF4	100	90.057	Equus_asinus_asinus
ENSACAG00000015110	PRPF4	100	90.057	ENSECAG00000007072	PRPF4	100	90.057	Equus_caballus
ENSACAG00000015110	PRPF4	86	94.142	ENSEEUG00000007480	PRPF4	100	70.652	Erinaceus_europaeus
ENSACAG00000015110	PRPF4	97	80.118	ENSELUG00000007510	prpf4	99	80.118	Esox_lucius
ENSACAG00000015110	PRPF4	100	89.695	ENSFCAG00000005514	PRPF4	100	89.695	Felis_catus
ENSACAG00000015110	PRPF4	98	89.955	ENSFALG00000005423	PRPF4	88	88.816	Ficedula_albicollis
ENSACAG00000015110	PRPF4	100	89.675	ENSFDAG00000005839	PRPF4	100	89.675	Fukomys_damarensis
ENSACAG00000015110	PRPF4	98	74.755	ENSFHEG00000001300	prpf4	99	74.755	Fundulus_heteroclitus
ENSACAG00000015110	PRPF4	98	91.406	ENSGALG00000008857	PRPF4	95	91.406	Gallus_gallus
ENSACAG00000015110	PRPF4	63	70.359	ENSGAFG00000012164	prpf4	68	70.359	Gambusia_affinis
ENSACAG00000015110	PRPF4	98	69.066	ENSGACG00000015476	prpf4	99	69.066	Gasterosteus_aculeatus
ENSACAG00000015110	PRPF4	98	91.211	ENSGAGG00000025029	PRPF4	94	91.211	Gopherus_agassizii
ENSACAG00000015110	PRPF4	100	90.249	ENSGGOG00000006943	PRPF4	100	90.249	Gorilla_gorilla
ENSACAG00000015110	PRPF4	98	74.755	ENSHBUG00000000562	prpf4	99	74.755	Haplochromis_burtoni
ENSACAG00000015110	PRPF4	100	74.857	ENSHGLG00000016628	-	100	75.238	Heterocephalus_glaber_female
ENSACAG00000015110	PRPF4	100	89.675	ENSHGLG00000015191	PRPF4	100	89.675	Heterocephalus_glaber_female
ENSACAG00000015110	PRPF4	100	71.893	ENSHGLG00000003838	-	100	71.893	Heterocephalus_glaber_female
ENSACAG00000015110	PRPF4	100	71.893	ENSHGLG00100005571	-	100	71.893	Heterocephalus_glaber_male
ENSACAG00000015110	PRPF4	97	78.937	ENSIPUG00000017956	PRPF4	99	78.937	Ictalurus_punctatus
ENSACAG00000015110	PRPF4	100	90.057	ENSSTOG00000027833	PRPF4	100	90.057	Ictidomys_tridecemlineatus
ENSACAG00000015110	PRPF4	100	89.866	ENSJJAG00000008838	Prpf4	100	89.866	Jaculus_jaculus
ENSACAG00000015110	PRPF4	97	76.125	ENSKMAG00000013236	prpf4	99	76.125	Kryptolebias_marmoratus
ENSACAG00000015110	PRPF4	97	75.246	ENSLBEG00000020611	prpf4	99	75.246	Labrus_bergylta
ENSACAG00000015110	PRPF4	99	79.110	ENSLACG00000016317	PRPF4	98	79.110	Latimeria_chalumnae
ENSACAG00000015110	PRPF4	97	80.118	ENSLOCG00000000581	prpf4	99	80.118	Lepisosteus_oculatus
ENSACAG00000015110	PRPF4	100	89.504	ENSLAFG00000018225	PRPF4	100	89.504	Loxodonta_africana
ENSACAG00000015110	PRPF4	100	88.719	ENSMFAG00000039397	PRPF4	100	89.675	Macaca_fascicularis
ENSACAG00000015110	PRPF4	100	88.910	ENSMMUG00000005844	PRPF4	100	89.866	Macaca_mulatta
ENSACAG00000015110	PRPF4	100	79.159	ENSMNEG00000033737	PRPF4	100	80.115	Macaca_nemestrina
ENSACAG00000015110	PRPF4	100	88.910	ENSMLEG00000040284	PRPF4	100	89.866	Mandrillus_leucophaeus
ENSACAG00000015110	PRPF4	98	75.342	ENSMAMG00000020141	prpf4	99	75.342	Mastacembelus_armatus
ENSACAG00000015110	PRPF4	98	74.951	ENSMZEG00005023205	prpf4	99	74.951	Maylandia_zebra
ENSACAG00000015110	PRPF4	98	91.033	ENSMGAG00000001796	PRPF4	95	91.033	Meleagris_gallopavo
ENSACAG00000015110	PRPF4	98	90.234	ENSMAUG00000018022	Prpf4	100	89.484	Mesocricetus_auratus
ENSACAG00000015110	PRPF4	100	89.504	ENSMICG00000015022	PRPF4	100	89.504	Microcebus_murinus
ENSACAG00000015110	PRPF4	100	89.101	ENSMOCG00000018273	Prpf4	100	89.101	Microtus_ochrogaster
ENSACAG00000015110	PRPF4	98	74.853	ENSMMOG00000021177	prpf4	99	74.853	Mola_mola
ENSACAG00000015110	PRPF4	100	89.333	ENSMODG00000004444	-	100	89.333	Monodelphis_domestica
ENSACAG00000015110	PRPF4	100	88.190	ENSMODG00000025096	-	97	88.190	Monodelphis_domestica
ENSACAG00000015110	PRPF4	97	75.930	ENSMALG00000013624	prpf4	99	75.930	Monopterus_albus
ENSACAG00000015110	PRPF4	100	89.675	MGP_CAROLIEiJ_G0026078	Prpf4	100	89.675	Mus_caroli
ENSACAG00000015110	PRPF4	100	89.675	ENSMUSG00000066148	Prpf4	100	89.675	Mus_musculus
ENSACAG00000015110	PRPF4	100	89.484	MGP_PahariEiJ_G0028413	Prpf4	100	89.484	Mus_pahari
ENSACAG00000015110	PRPF4	100	89.675	MGP_SPRETEiJ_G0027042	Prpf4	100	89.675	Mus_spretus
ENSACAG00000015110	PRPF4	100	90.057	ENSMPUG00000007883	PRPF4	100	90.057	Mustela_putorius_furo
ENSACAG00000015110	PRPF4	100	90.249	ENSMLUG00000015309	-	97	90.249	Myotis_lucifugus
ENSACAG00000015110	PRPF4	99	89.168	ENSMLUG00000008626	-	96	89.168	Myotis_lucifugus
ENSACAG00000015110	PRPF4	100	84.512	ENSNGAG00000000468	Prpf4	100	84.512	Nannospalax_galili
ENSACAG00000015110	PRPF4	98	75.147	ENSNBRG00000007972	prpf4	99	75.147	Neolamprologus_brichardi
ENSACAG00000015110	PRPF4	100	90.057	ENSNLEG00000016647	PRPF4	100	90.057	Nomascus_leucogenys
ENSACAG00000015110	PRPF4	98	89.824	ENSMEUG00000013256	PRPF4	99	89.824	Notamacropus_eugenii
ENSACAG00000015110	PRPF4	100	89.504	ENSOPRG00000005302	PRPF4	100	89.504	Ochotona_princeps
ENSACAG00000015110	PRPF4	100	90.057	ENSODEG00000018147	PRPF4	100	90.057	Octodon_degus
ENSACAG00000015110	PRPF4	98	74.951	ENSONIG00000012671	prpf4	99	74.951	Oreochromis_niloticus
ENSACAG00000015110	PRPF4	100	90.249	ENSOCUG00000005046	PRPF4	100	90.249	Oryctolagus_cuniculus
ENSACAG00000015110	PRPF4	97	74.460	ENSORLG00000019641	prpf4	99	74.460	Oryzias_latipes
ENSACAG00000015110	PRPF4	97	74.460	ENSORLG00020019438	prpf4	99	74.460	Oryzias_latipes_hni
ENSACAG00000015110	PRPF4	98	74.274	ENSOMEG00000020941	prpf4	99	74.274	Oryzias_melastigma
ENSACAG00000015110	PRPF4	100	86.616	ENSOGAG00000007802	PRPF4	98	86.616	Otolemur_garnettii
ENSACAG00000015110	PRPF4	100	89.866	ENSOARG00000006319	PRPF4	97	89.866	Ovis_aries
ENSACAG00000015110	PRPF4	100	90.249	ENSPPAG00000041797	PRPF4	100	90.249	Pan_paniscus
ENSACAG00000015110	PRPF4	100	90.057	ENSPPRG00000014360	PRPF4	100	90.057	Panthera_pardus
ENSACAG00000015110	PRPF4	100	90.057	ENSPTIG00000009574	PRPF4	100	90.057	Panthera_tigris_altaica
ENSACAG00000015110	PRPF4	100	90.249	ENSPTRG00000021274	PRPF4	100	89.885	Pan_troglodytes
ENSACAG00000015110	PRPF4	100	88.719	ENSPANG00000025776	PRPF4	96	89.675	Papio_anubis
ENSACAG00000015110	PRPF4	97	82.087	ENSPKIG00000017259	prpf4	99	82.087	Paramormyrops_kingsleyae
ENSACAG00000015110	PRPF4	100	89.866	ENSPSIG00000010713	PRPF4	92	89.866	Pelodiscus_sinensis
ENSACAG00000015110	PRPF4	98	58.349	ENSPMGG00000000997	prpf4	98	58.165	Periophthalmus_magnuspinnatus
ENSACAG00000015110	PRPF4	100	89.675	ENSPEMG00000024115	Prpf4	100	89.675	Peromyscus_maniculatus_bairdii
ENSACAG00000015110	PRPF4	98	89.824	ENSPCIG00000003821	PRPF4	99	89.824	Phascolarctos_cinereus
ENSACAG00000015110	PRPF4	98	68.726	ENSPFOG00000013524	prpf4	99	70.000	Poecilia_formosa
ENSACAG00000015110	PRPF4	82	69.231	ENSPLAG00000011620	prpf4	97	69.231	Poecilia_latipinna
ENSACAG00000015110	PRPF4	95	70.882	ENSPMEG00000006813	prpf4	99	70.882	Poecilia_mexicana
ENSACAG00000015110	PRPF4	98	90.607	ENSPCAG00000002561	PRPF4	99	90.607	Procavia_capensis
ENSACAG00000015110	PRPF4	98	91.211	ENSPCOG00000011975	PRPF4	100	90.440	Propithecus_coquereli
ENSACAG00000015110	PRPF4	100	86.260	ENSPVAG00000004708	PRPF4	100	86.260	Pteropus_vampyrus
ENSACAG00000015110	PRPF4	98	74.951	ENSPNYG00000008013	prpf4	99	74.951	Pundamilia_nyererei
ENSACAG00000015110	PRPF4	97	80.118	ENSPNAG00000000697	prpf4	99	80.118	Pygocentrus_nattereri
ENSACAG00000015110	PRPF4	100	89.484	ENSRNOG00000014777	Prpf4	100	89.484	Rattus_norvegicus
ENSACAG00000015110	PRPF4	100	90.057	ENSRBIG00000040221	PRPF4	100	90.057	Rhinopithecus_bieti
ENSACAG00000015110	PRPF4	100	90.057	ENSRROG00000040240	PRPF4	100	90.057	Rhinopithecus_roxellana
ENSACAG00000015110	PRPF4	100	89.143	ENSSHAG00000017658	PRPF4	100	89.143	Sarcophilus_harrisii
ENSACAG00000015110	PRPF4	97	82.283	ENSSFOG00015008963	prpf4	99	82.283	Scleropages_formosus
ENSACAG00000015110	PRPF4	97	75.342	ENSSMAG00000008889	prpf4	99	75.342	Scophthalmus_maximus
ENSACAG00000015110	PRPF4	97	75.413	ENSSDUG00000022083	prpf4	94	75.826	Seriola_dumerili
ENSACAG00000015110	PRPF4	97	75.620	ENSSLDG00000008115	prpf4	94	76.033	Seriola_lalandi_dorsalis
ENSACAG00000015110	PRPF4	100	91.954	ENSSPUG00000015582	PRPF4	100	91.954	Sphenodon_punctatus
ENSACAG00000015110	PRPF4	97	71.262	ENSSPAG00000011286	prpf4	99	71.262	Stegastes_partitus
ENSACAG00000015110	PRPF4	100	90.057	ENSSSCG00000024648	PRPF4	100	90.057	Sus_scrofa
ENSACAG00000015110	PRPF4	98	89.844	ENSTGUG00000002623	PRPF4	100	91.853	Taeniopygia_guttata
ENSACAG00000015110	PRPF4	98	75.686	ENSTRUG00000008853	prpf4	99	75.686	Takifugu_rubripes
ENSACAG00000015110	PRPF4	98	75.639	ENSTNIG00000013250	prpf4	99	75.639	Tetraodon_nigroviridis
ENSACAG00000015110	PRPF4	100	81.679	ENSTBEG00000000821	PRPF4	100	81.679	Tupaia_belangeri
ENSACAG00000015110	PRPF4	82	93.023	ENSTTRG00000003246	PRPF4	85	93.023	Tursiops_truncatus
ENSACAG00000015110	PRPF4	64	85.119	ENSUAMG00000018288	PRPF4	88	88.350	Ursus_americanus
ENSACAG00000015110	PRPF4	100	89.484	ENSUMAG00000019375	PRPF4	100	89.484	Ursus_maritimus
ENSACAG00000015110	PRPF4	100	89.885	ENSVPAG00000005281	PRPF4	100	89.885	Vicugna_pacos
ENSACAG00000015110	PRPF4	100	88.805	ENSVVUG00000002476	PRPF4	99	90.335	Vulpes_vulpes
ENSACAG00000015110	PRPF4	69	57.500	ENSXCOG00000006101	prpf4	93	59.012	Xiphophorus_couchianus
ENSACAG00000015110	PRPF4	88	62.716	ENSXMAG00000002750	prpf4	99	63.851	Xiphophorus_maculatus