EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000015200 (Gene tree)
Gene ID: 100556882
Gene Symbol: MTREX
Alias: Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 44555 bases
Position: chr2:2528609-2573163
Accession: 100556882
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000015046	rRNA_proc-arch	PF13234.6	1.2e-88	1	1
ENSACAP00000015046	DEAD	PF00270.29	1.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000015350	MTREX-201	3475	XM_003216182	ENSACAP00000015046	1077 (aa)	XP_003216230	G1KQY4

Gene Model

Click here to download ENSACAG00000015200's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000015200's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000015200	MTREX	86	36.436	ENSACAG00000011746	SKIV2L	82	35.123

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000015200	MTREX	96	90.787	ENSG00000039123	MTREX	100	90.979	Homo_sapiens
ENSACAG00000015200	MTREX	96	83.732	ENSAPOG00000007814	mtrex	100	83.732	Acanthochromis_polyacanthus
ENSACAG00000015200	MTREX	96	90.796	ENSAMEG00000013856	MTREX	100	90.796	Ailuropoda_melanoleuca
ENSACAG00000015200	MTREX	96	82.646	ENSACIG00000015117	mtrex	100	82.646	Amphilophus_citrinellus
ENSACAG00000015200	MTREX	96	84.211	ENSAOCG00000011884	mtrex	100	84.211	Amphiprion_ocellaris
ENSACAG00000015200	MTREX	96	84.211	ENSAPEG00000019384	mtrex	100	84.211	Amphiprion_percula
ENSACAG00000015200	MTREX	96	84.674	ENSATEG00000015117	mtrex	100	84.674	Anabas_testudineus
ENSACAG00000015200	MTREX	90	95.253	ENSAPLG00000009694	MTREX	98	95.253	Anas_platyrhynchos
ENSACAG00000015200	MTREX	96	90.787	ENSANAG00000023095	MTREX	100	90.979	Aotus_nancymaae
ENSACAG00000015200	MTREX	96	83.062	ENSACLG00000001921	mtrex	100	83.158	Astatotilapia_calliptera
ENSACAG00000015200	MTREX	92	84.290	ENSAMXG00000018751	mtrex	99	84.523	Astyanax_mexicanus
ENSACAG00000015200	MTREX	96	91.058	ENSBTAG00000010518	MTREX	100	91.058	Bos_taurus
ENSACAG00000015200	MTREX	88	54.469	WBGene00012342	mtr-4	92	54.469	Caenorhabditis_elegans
ENSACAG00000015200	MTREX	96	90.076	ENSCJAG00000001773	MTREX	100	90.076	Callithrix_jacchus
ENSACAG00000015200	MTREX	96	90.691	ENSCAFG00000006818	MTREX	100	90.787	Canis_familiaris
ENSACAG00000015200	MTREX	96	90.691	ENSCAFG00020024352	MTREX	100	90.787	Canis_lupus_dingo
ENSACAG00000015200	MTREX	96	90.595	ENSCHIG00000024413	MTREX	100	90.691	Capra_hircus
ENSACAG00000015200	MTREX	90	93.357	ENSTSYG00000007389	MTREX	100	93.357	Carlito_syrichta
ENSACAG00000015200	MTREX	93	68.537	ENSCAPG00000008696	MTREX	100	68.537	Cavia_aperea
ENSACAG00000015200	MTREX	96	90.787	ENSCPOG00000009797	MTREX	100	90.979	Cavia_porcellus
ENSACAG00000015200	MTREX	96	90.787	ENSCCAG00000014177	MTREX	100	90.979	Cebus_capucinus
ENSACAG00000015200	MTREX	96	90.979	ENSCATG00000042153	MTREX	100	91.171	Cercocebus_atys
ENSACAG00000015200	MTREX	96	90.979	ENSCLAG00000006622	MTREX	100	91.075	Chinchilla_lanigera
ENSACAG00000015200	MTREX	96	86.699	ENSCSAG00000016445	MTREX	100	86.890	Chlorocebus_sabaeus
ENSACAG00000015200	MTREX	67	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
ENSACAG00000015200	MTREX	98	92.053	ENSCPBG00000026551	MTREX	94	93.846	Chrysemys_picta_bellii
ENSACAG00000015200	MTREX	96	67.785	ENSCING00000003239	-	99	67.785	Ciona_intestinalis
ENSACAG00000015200	MTREX	96	66.667	ENSCSAVG00000009304	-	100	71.290	Ciona_savignyi
ENSACAG00000015200	MTREX	96	90.979	ENSCANG00000035770	MTREX	100	90.979	Colobus_angolensis_palliatus
ENSACAG00000015200	MTREX	96	91.162	ENSCGRG00001024680	Mtrex	100	91.162	Cricetulus_griseus_chok1gshd
ENSACAG00000015200	MTREX	96	91.162	ENSCGRG00000000307	Mtrex	100	91.162	Cricetulus_griseus_crigri
ENSACAG00000015200	MTREX	97	82.983	ENSCSEG00000018621	mtrex	98	83.142	Cynoglossus_semilaevis
ENSACAG00000015200	MTREX	96	83.828	ENSCVAG00000004556	mtrex	100	84.100	Cyprinodon_variegatus
ENSACAG00000015200	MTREX	96	85.742	ENSDARG00000013457	mtrex	100	85.742	Danio_rerio
ENSACAG00000015200	MTREX	96	90.631	ENSDNOG00000015375	MTREX	100	90.631	Dasypus_novemcinctus
ENSACAG00000015200	MTREX	96	90.787	ENSDORG00000006782	Mtrex	100	90.883	Dipodomys_ordii
ENSACAG00000015200	MTREX	88	66.841	FBgn0001986	Mtr4	98	63.259	Drosophila_melanogaster
ENSACAG00000015200	MTREX	87	74.483	ENSETEG00000000727	MTREX	90	74.483	Echinops_telfairi
ENSACAG00000015200	MTREX	96	74.831	ENSEBUG00000012869	mtrex	99	74.831	Eptatretus_burgeri
ENSACAG00000015200	MTREX	96	90.979	ENSEASG00005013270	MTREX	100	91.171	Equus_asinus_asinus
ENSACAG00000015200	MTREX	96	91.075	ENSECAG00000023723	MTREX	100	96.759	Equus_caballus
ENSACAG00000015200	MTREX	95	82.927	ENSEEUG00000000527	MTREX	100	83.220	Erinaceus_europaeus
ENSACAG00000015200	MTREX	95	84.986	ENSELUG00000004898	mtrex	100	90.126	Esox_lucius
ENSACAG00000015200	MTREX	96	90.979	ENSFCAG00000010575	MTREX	100	90.979	Felis_catus
ENSACAG00000015200	MTREX	96	91.145	ENSFALG00000010850	MTREX	100	91.145	Ficedula_albicollis
ENSACAG00000015200	MTREX	96	90.865	ENSFDAG00000011199	MTREX	100	90.865	Fukomys_damarensis
ENSACAG00000015200	MTREX	96	84.115	ENSFHEG00000023014	mtrex	100	82.854	Fundulus_heteroclitus
ENSACAG00000015200	MTREX	96	80.802	ENSGMOG00000014702	mtrex	100	81.184	Gadus_morhua
ENSACAG00000015200	MTREX	97	92.219	ENSGALG00000014709	MTREX	86	92.212	Gallus_gallus
ENSACAG00000015200	MTREX	96	84.306	ENSGAFG00000012425	mtrex	100	84.306	Gambusia_affinis
ENSACAG00000015200	MTREX	96	80.268	ENSGACG00000016260	mtrex	96	86.087	Gasterosteus_aculeatus
ENSACAG00000015200	MTREX	96	93.365	ENSGAGG00000020036	MTREX	100	93.750	Gopherus_agassizii
ENSACAG00000015200	MTREX	96	90.883	ENSGGOG00000001867	MTREX	100	91.075	Gorilla_gorilla
ENSACAG00000015200	MTREX	96	83.062	ENSHBUG00000006229	mtrex	100	83.158	Haplochromis_burtoni
ENSACAG00000015200	MTREX	96	90.805	ENSHGLG00000019445	SKIV2L2	100	91.154	Heterocephalus_glaber_female
ENSACAG00000015200	MTREX	96	90.805	ENSHGLG00100011833	SKIV2L2	100	91.154	Heterocephalus_glaber_male
ENSACAG00000015200	MTREX	88	84.959	ENSHCOG00000019995	mtrex	100	84.959	Hippocampus_comes
ENSACAG00000015200	MTREX	96	85.427	ENSIPUG00000024348	skiv2l2	100	85.714	Ictalurus_punctatus
ENSACAG00000015200	MTREX	96	90.883	ENSSTOG00000010802	MTREX	100	91.171	Ictidomys_tridecemlineatus
ENSACAG00000015200	MTREX	96	85.399	ENSJJAG00000020975	Mtrex	100	85.467	Jaculus_jaculus
ENSACAG00000015200	MTREX	96	83.333	ENSKMAG00000012642	mtrex	100	83.333	Kryptolebias_marmoratus
ENSACAG00000015200	MTREX	96	83.828	ENSLBEG00000019367	mtrex	99	85.788	Labrus_bergylta
ENSACAG00000015200	MTREX	96	89.337	ENSLACG00000009075	MTREX	100	89.337	Latimeria_chalumnae
ENSACAG00000015200	MTREX	96	87.320	ENSLOCG00000010186	mtrex	100	87.320	Lepisosteus_oculatus
ENSACAG00000015200	MTREX	96	88.292	ENSLAFG00000010497	MTREX	100	88.484	Loxodonta_africana
ENSACAG00000015200	MTREX	96	90.979	ENSMFAG00000031610	MTREX	100	91.171	Macaca_fascicularis
ENSACAG00000015200	MTREX	96	90.421	ENSMMUG00000010379	MTREX	100	90.517	Macaca_mulatta
ENSACAG00000015200	MTREX	96	90.979	ENSMNEG00000032746	MTREX	100	91.171	Macaca_nemestrina
ENSACAG00000015200	MTREX	96	90.979	ENSMLEG00000041051	MTREX	100	91.171	Mandrillus_leucophaeus
ENSACAG00000015200	MTREX	96	83.046	ENSMAMG00000016753	mtrex	98	86.673	Mastacembelus_armatus
ENSACAG00000015200	MTREX	96	83.062	ENSMZEG00005000414	mtrex	100	83.158	Maylandia_zebra
ENSACAG00000015200	MTREX	91	68.219	ENSMGAG00000003980	MTREX	99	68.219	Meleagris_gallopavo
ENSACAG00000015200	MTREX	96	91.162	ENSMAUG00000010727	Mtrex	100	91.162	Mesocricetus_auratus
ENSACAG00000015200	MTREX	96	91.075	ENSMICG00000012779	MTREX	100	91.267	Microcebus_murinus
ENSACAG00000015200	MTREX	96	91.171	ENSMOCG00000019886	Mtrex	100	91.171	Microtus_ochrogaster
ENSACAG00000015200	MTREX	96	81.914	ENSMMOG00000002476	mtrex	100	81.914	Mola_mola
ENSACAG00000015200	MTREX	96	91.049	ENSMODG00000019494	MTREX	100	91.434	Monodelphis_domestica
ENSACAG00000015200	MTREX	89	82.161	ENSMALG00000002917	mtrex	99	82.161	Monopterus_albus
ENSACAG00000015200	MTREX	96	91.250	MGP_CAROLIEiJ_G0018896	Mtrex	100	91.092	Mus_caroli
ENSACAG00000015200	MTREX	96	91.250	ENSMUSG00000016018	Mtrex	100	90.996	Mus_musculus
ENSACAG00000015200	MTREX	96	90.865	MGP_PahariEiJ_G0015967	Mtrex	100	90.709	Mus_pahari
ENSACAG00000015200	MTREX	96	91.250	MGP_SPRETEiJ_G0019775	Mtrex	100	90.996	Mus_spretus
ENSACAG00000015200	MTREX	96	90.883	ENSMPUG00000007619	MTREX	100	90.979	Mustela_putorius_furo
ENSACAG00000015200	MTREX	96	91.371	ENSMLUG00000001152	MTREX	100	91.371	Myotis_lucifugus
ENSACAG00000015200	MTREX	96	90.883	ENSNGAG00000011938	Mtrex	100	91.075	Nannospalax_galili
ENSACAG00000015200	MTREX	96	83.158	ENSNBRG00000011293	mtrex	100	83.254	Neolamprologus_brichardi
ENSACAG00000015200	MTREX	96	86.686	ENSNLEG00000001494	MTREX	100	86.877	Nomascus_leucogenys
ENSACAG00000015200	MTREX	80	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
ENSACAG00000015200	MTREX	96	76.945	ENSOPRG00000008009	MTREX	100	76.753	Ochotona_princeps
ENSACAG00000015200	MTREX	96	90.115	ENSODEG00000017234	MTREX	100	90.211	Octodon_degus
ENSACAG00000015200	MTREX	96	82.967	ENSONIG00000007587	mtrex	100	83.062	Oreochromis_niloticus
ENSACAG00000015200	MTREX	96	91.092	ENSOCUG00000004463	MTREX	100	91.538	Oryctolagus_cuniculus
ENSACAG00000015200	MTREX	96	83.572	ENSORLG00000005443	mtrex	100	83.572	Oryzias_latipes
ENSACAG00000015200	MTREX	96	83.572	ENSORLG00020006329	mtrex	100	83.572	Oryzias_latipes_hni
ENSACAG00000015200	MTREX	96	83.668	ENSORLG00015012924	mtrex	100	83.668	Oryzias_latipes_hsok
ENSACAG00000015200	MTREX	96	83.095	ENSOMEG00000008825	mtrex	100	83.095	Oryzias_melastigma
ENSACAG00000015200	MTREX	96	90.499	ENSOGAG00000002886	MTREX	100	90.691	Otolemur_garnettii
ENSACAG00000015200	MTREX	96	90.335	ENSOARG00000007764	MTREX	100	90.431	Ovis_aries
ENSACAG00000015200	MTREX	96	90.787	ENSPPAG00000039291	MTREX	100	90.979	Pan_paniscus
ENSACAG00000015200	MTREX	96	90.979	ENSPPRG00000019701	MTREX	100	90.979	Panthera_pardus
ENSACAG00000015200	MTREX	96	89.539	ENSPTIG00000009313	MTREX	100	89.539	Panthera_tigris_altaica
ENSACAG00000015200	MTREX	96	90.787	ENSPTRG00000016878	MTREX	100	90.979	Pan_troglodytes
ENSACAG00000015200	MTREX	96	90.883	ENSPANG00000009697	MTREX	100	91.075	Papio_anubis
ENSACAG00000015200	MTREX	96	87.261	ENSPKIG00000020833	mtrex	100	87.261	Paramormyrops_kingsleyae
ENSACAG00000015200	MTREX	96	92.905	ENSPSIG00000012150	MTREX	100	93.173	Pelodiscus_sinensis
ENSACAG00000015200	MTREX	96	81.262	ENSPMGG00000002582	mtrex	100	81.262	Periophthalmus_magnuspinnatus
ENSACAG00000015200	MTREX	92	66.365	ENSPMAG00000009668	mtrex	100	66.365	Petromyzon_marinus
ENSACAG00000015200	MTREX	88	95.776	ENSPCIG00000024730	MTREX	100	95.776	Phascolarctos_cinereus
ENSACAG00000015200	MTREX	73	88.213	ENSPFOG00000003141	mtrex	100	88.452	Poecilia_formosa
ENSACAG00000015200	MTREX	96	84.402	ENSPLAG00000021311	mtrex	100	84.483	Poecilia_latipinna
ENSACAG00000015200	MTREX	88	88.038	ENSPMEG00000010597	mtrex	99	88.353	Poecilia_mexicana
ENSACAG00000015200	MTREX	96	84.211	ENSPREG00000003089	mtrex	100	84.291	Poecilia_reticulata
ENSACAG00000015200	MTREX	95	90.732	ENSPPYG00000015469	MTREX	98	90.927	Pongo_abelii
ENSACAG00000015200	MTREX	91	80.000	ENSPCAG00000013120	MTREX	94	80.000	Procavia_capensis
ENSACAG00000015200	MTREX	95	84.890	ENSPCOG00000018092	MTREX	100	85.353	Propithecus_coquereli
ENSACAG00000015200	MTREX	96	90.787	ENSPVAG00000002445	MTREX	100	90.979	Pteropus_vampyrus
ENSACAG00000015200	MTREX	96	82.967	ENSPNYG00000006164	mtrex	100	83.062	Pundamilia_nyererei
ENSACAG00000015200	MTREX	96	85.920	ENSPNAG00000008794	mtrex	100	86.303	Pygocentrus_nattereri
ENSACAG00000015200	MTREX	95	90.223	ENSRNOG00000010125	Mtrex	97	90.416	Rattus_norvegicus
ENSACAG00000015200	MTREX	96	89.155	ENSRBIG00000034930	MTREX	100	89.347	Rhinopithecus_bieti
ENSACAG00000015200	MTREX	96	90.883	ENSRROG00000039895	MTREX	100	91.075	Rhinopithecus_roxellana
ENSACAG00000015200	MTREX	86	56.080	YJL050W	MTR4	89	56.080	Saccharomyces_cerevisiae
ENSACAG00000015200	MTREX	96	90.787	ENSSBOG00000026693	MTREX	100	90.979	Saimiri_boliviensis_boliviensis
ENSACAG00000015200	MTREX	93	92.778	ENSSHAG00000004600	MTREX	100	92.778	Sarcophilus_harrisii
ENSACAG00000015200	MTREX	96	87.344	ENSSFOG00015014355	skiv2l2	100	87.344	Scleropages_formosus
ENSACAG00000015200	MTREX	96	84.115	ENSSMAG00000007572	mtrex	100	84.019	Scophthalmus_maximus
ENSACAG00000015200	MTREX	96	84.226	ENSSDUG00000023789	mtrex	100	84.226	Seriola_dumerili
ENSACAG00000015200	MTREX	96	84.130	ENSSLDG00000006301	mtrex	100	84.130	Seriola_lalandi_dorsalis
ENSACAG00000015200	MTREX	96	89.347	ENSSARG00000008387	MTREX	100	89.293	Sorex_araneus
ENSACAG00000015200	MTREX	96	80.481	ENSSPUG00000007071	MTREX	100	81.058	Sphenodon_punctatus
ENSACAG00000015200	MTREX	96	82.002	ENSSPAG00000011319	mtrex	100	82.483	Stegastes_partitus
ENSACAG00000015200	MTREX	96	90.787	ENSSSCG00000016911	MTREX	100	90.979	Sus_scrofa
ENSACAG00000015200	MTREX	96	90.279	ENSTGUG00000002480	MTREX	100	90.279	Taeniopygia_guttata
ENSACAG00000015200	MTREX	96	82.887	ENSTRUG00000014571	mtrex	100	82.887	Takifugu_rubripes
ENSACAG00000015200	MTREX	96	75.240	ENSTBEG00000007769	MTREX	100	75.432	Tupaia_belangeri
ENSACAG00000015200	MTREX	96	90.865	ENSTTRG00000008678	MTREX	100	90.865	Tursiops_truncatus
ENSACAG00000015200	MTREX	96	90.691	ENSUAMG00000023061	MTREX	100	90.787	Ursus_americanus
ENSACAG00000015200	MTREX	96	90.134	ENSUMAG00000009373	MTREX	99	96.667	Ursus_maritimus
ENSACAG00000015200	MTREX	96	80.998	ENSVPAG00000011174	MTREX	100	80.998	Vicugna_pacos
ENSACAG00000015200	MTREX	96	90.787	ENSVVUG00000021337	MTREX	100	90.883	Vulpes_vulpes
ENSACAG00000015200	MTREX	96	89.423	ENSXETG00000032798	MTREX	100	89.423	Xenopus_tropicalis
ENSACAG00000015200	MTREX	96	84.034	ENSXMAG00000004799	mtrex	100	83.923	Xiphophorus_maculatus