EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000015269 (Gene tree)
Gene ID: 100553455
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 45183 bases
Position: chrGL343246.1:1350881-1396063
Accession: 100553455
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000015067	DND1_DSRM	PF14709.7	9.7e-26	1	1
ENSACAP00000015067	RRM_1	PF00076.22	9.4e-40	1	3
ENSACAP00000015067	RRM_1	PF00076.22	9.4e-40	2	3
ENSACAP00000015067	RRM_1	PF00076.22	9.4e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000015371	A1CF-201	1871	XM_003224374	ENSACAP00000015067	581 (aa)	XP_003224422	H9GM66

Gene Model

Click here to download ENSACAG00000015269's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000015269's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000015269	A1CF	74	58.542	ENSACAG00000011833	RBM47	70	57.859
ENSACAG00000015269	A1CF	52	52.273	ENSACAG00000015234	SYNCRIP	53	51.623
ENSACAG00000015269	A1CF	86	71.333	ENSACAG00000015599	RBM46	83	71.333
ENSACAG00000015269	A1CF	50	53.925	ENSACAG00000017593	HNRNPR	65	42.959

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000015269	A1CF	100	83.646	ENSG00000148584	A1CF	100	91.045	Homo_sapiens
ENSACAG00000015269	A1CF	100	73.480	ENSAPOG00000008259	a1cf	100	73.649	Acanthochromis_polyacanthus
ENSACAG00000015269	A1CF	100	82.462	ENSAMEG00000000523	A1CF	100	83.137	Ailuropoda_melanoleuca
ENSACAG00000015269	A1CF	100	75.868	ENSACIG00000008632	a1cf	100	76.860	Amphilophus_citrinellus
ENSACAG00000015269	A1CF	100	74.167	ENSAOCG00000023744	a1cf	96	81.159	Amphiprion_ocellaris
ENSACAG00000015269	A1CF	100	73.191	ENSAPEG00000009537	a1cf	100	74.342	Amphiprion_percula
ENSACAG00000015269	A1CF	100	77.025	ENSATEG00000013720	a1cf	100	77.355	Anabas_testudineus
ENSACAG00000015269	A1CF	100	87.119	ENSAPLG00000002964	A1CF	100	87.119	Anas_platyrhynchos
ENSACAG00000015269	A1CF	100	84.157	ENSANAG00000019974	A1CF	100	84.157	Aotus_nancymaae
ENSACAG00000015269	A1CF	100	75.879	ENSACLG00000017428	a1cf	100	77.090	Astatotilapia_calliptera
ENSACAG00000015269	A1CF	100	71.240	ENSAMXG00000018180	a1cf	100	71.240	Astyanax_mexicanus
ENSACAG00000015269	A1CF	100	84.014	ENSBTAG00000021195	A1CF	100	85.714	Bos_taurus
ENSACAG00000015269	A1CF	100	83.361	ENSCJAG00000005045	A1CF	100	83.361	Callithrix_jacchus
ENSACAG00000015269	A1CF	100	82.939	ENSCAFG00000015581	A1CF	100	83.615	Canis_familiaris
ENSACAG00000015269	A1CF	100	82.939	ENSCAFG00020026421	A1CF	98	86.869	Canis_lupus_dingo
ENSACAG00000015269	A1CF	100	82.718	ENSCHIG00000020411	A1CF	100	83.054	Capra_hircus
ENSACAG00000015269	A1CF	94	84.783	ENSTSYG00000001755	A1CF	100	84.964	Carlito_syrichta
ENSACAG00000015269	A1CF	100	75.926	ENSCAPG00000017386	A1CF	100	75.962	Cavia_aperea
ENSACAG00000015269	A1CF	100	83.025	ENSCPOG00000009807	A1CF	100	83.025	Cavia_porcellus
ENSACAG00000015269	A1CF	100	83.838	ENSCCAG00000018168	A1CF	100	83.838	Cebus_capucinus
ENSACAG00000015269	A1CF	100	84.957	ENSCATG00000043715	A1CF	100	84.957	Cercocebus_atys
ENSACAG00000015269	A1CF	100	83.082	ENSCLAG00000010424	A1CF	100	83.585	Chinchilla_lanigera
ENSACAG00000015269	A1CF	100	83.642	ENSCSAG00000007032	A1CF	100	83.642	Chlorocebus_sabaeus
ENSACAG00000015269	A1CF	98	81.304	ENSCHOG00000009089	A1CF	98	81.304	Choloepus_hoffmanni
ENSACAG00000015269	A1CF	100	86.610	ENSCPBG00000026464	A1CF	100	86.610	Chrysemys_picta_bellii
ENSACAG00000015269	A1CF	100	83.642	ENSCANG00000038032	A1CF	100	83.642	Colobus_angolensis_palliatus
ENSACAG00000015269	A1CF	100	83.221	ENSCGRG00001017413	A1cf	100	83.221	Cricetulus_griseus_chok1gshd
ENSACAG00000015269	A1CF	100	82.047	ENSCGRG00000017332	A1cf	100	82.886	Cricetulus_griseus_crigri
ENSACAG00000015269	A1CF	100	74.629	ENSCSEG00000002361	a1cf	100	74.465	Cynoglossus_semilaevis
ENSACAG00000015269	A1CF	100	76.529	ENSCVAG00000010520	a1cf	100	76.860	Cyprinodon_variegatus
ENSACAG00000015269	A1CF	100	78.475	ENSDARG00000002968	a1cf	100	78.268	Danio_rerio
ENSACAG00000015269	A1CF	100	82.215	ENSDNOG00000002829	A1CF	100	82.383	Dasypus_novemcinctus
ENSACAG00000015269	A1CF	82	87.143	ENSETEG00000012527	A1CF	82	87.143	Echinops_telfairi
ENSACAG00000015269	A1CF	100	82.943	ENSEASG00005012924	A1CF	100	83.278	Equus_asinus_asinus
ENSACAG00000015269	A1CF	100	82.609	ENSECAG00000010424	A1CF	100	82.943	Equus_caballus
ENSACAG00000015269	A1CF	78	75.388	ENSEEUG00000000013	A1CF	98	75.388	Erinaceus_europaeus
ENSACAG00000015269	A1CF	100	78.655	ENSELUG00000003159	a1cf	100	78.655	Esox_lucius
ENSACAG00000015269	A1CF	100	82.564	ENSFCAG00000011179	A1CF	100	83.590	Felis_catus
ENSACAG00000015269	A1CF	100	87.973	ENSFALG00000013183	A1CF	100	87.973	Ficedula_albicollis
ENSACAG00000015269	A1CF	100	83.503	ENSFDAG00000019371	A1CF	100	84.014	Fukomys_damarensis
ENSACAG00000015269	A1CF	100	70.909	ENSFHEG00000019652	a1cf	96	83.594	Fundulus_heteroclitus
ENSACAG00000015269	A1CF	100	68.874	ENSGMOG00000018943	a1cf	100	68.709	Gadus_morhua
ENSACAG00000015269	A1CF	94	87.814	ENSGALG00000003765	A1CF	96	87.814	Gallus_gallus
ENSACAG00000015269	A1CF	100	71.000	ENSGAFG00000014868	a1cf	100	71.595	Gambusia_affinis
ENSACAG00000015269	A1CF	100	72.533	ENSGACG00000010241	a1cf	100	73.026	Gasterosteus_aculeatus
ENSACAG00000015269	A1CF	94	87.433	ENSGAGG00000016508	A1CF	97	87.433	Gopherus_agassizii
ENSACAG00000015269	A1CF	100	82.689	ENSGGOG00000009670	A1CF	100	83.025	Gorilla_gorilla
ENSACAG00000015269	A1CF	100	75.537	ENSHBUG00000021959	a1cf	100	77.355	Haplochromis_burtoni
ENSACAG00000015269	A1CF	100	82.718	ENSHGLG00000008955	A1CF	100	82.718	Heterocephalus_glaber_female
ENSACAG00000015269	A1CF	100	82.047	ENSHGLG00100000518	A1CF	100	82.047	Heterocephalus_glaber_male
ENSACAG00000015269	A1CF	94	68.966	ENSHCOG00000017669	a1cf	92	71.454	Hippocampus_comes
ENSACAG00000015269	A1CF	90	79.888	ENSIPUG00000010367	a1cf	97	79.374	Ictalurus_punctatus
ENSACAG00000015269	A1CF	100	75.610	ENSKMAG00000006568	a1cf	100	76.260	Kryptolebias_marmoratus
ENSACAG00000015269	A1CF	99	75.123	ENSLBEG00000020994	a1cf	99	75.941	Labrus_bergylta
ENSACAG00000015269	A1CF	100	82.222	ENSLACG00000008061	A1CF	100	82.222	Latimeria_chalumnae
ENSACAG00000015269	A1CF	100	80.976	ENSLOCG00000006302	a1cf	100	80.976	Lepisosteus_oculatus
ENSACAG00000015269	A1CF	100	83.389	ENSLAFG00000015462	A1CF	100	83.389	Loxodonta_africana
ENSACAG00000015269	A1CF	100	84.957	ENSMFAG00000035948	A1CF	100	84.957	Macaca_fascicularis
ENSACAG00000015269	A1CF	100	84.957	ENSMMUG00000007077	A1CF	100	84.957	Macaca_mulatta
ENSACAG00000015269	A1CF	100	85.128	ENSMNEG00000031454	A1CF	100	85.128	Macaca_nemestrina
ENSACAG00000015269	A1CF	100	83.811	ENSMLEG00000037223	A1CF	100	83.811	Mandrillus_leucophaeus
ENSACAG00000015269	A1CF	100	73.964	ENSMAMG00000010402	a1cf	100	73.588	Mastacembelus_armatus
ENSACAG00000015269	A1CF	100	77.311	ENSMZEG00005013245	a1cf	100	77.311	Maylandia_zebra
ENSACAG00000015269	A1CF	100	86.971	ENSMGAG00000001507	A1CF	100	86.971	Meleagris_gallopavo
ENSACAG00000015269	A1CF	100	83.054	ENSMAUG00000007422	A1cf	100	83.054	Mesocricetus_auratus
ENSACAG00000015269	A1CF	100	83.418	ENSMICG00000003377	A1CF	100	83.926	Microcebus_murinus
ENSACAG00000015269	A1CF	100	82.718	ENSMOCG00000021536	A1cf	100	82.718	Microtus_ochrogaster
ENSACAG00000015269	A1CF	100	67.953	ENSMMOG00000009422	a1cf	100	68.624	Mola_mola
ENSACAG00000015269	A1CF	92	86.220	ENSMODG00000016478	A1CF	99	86.220	Monodelphis_domestica
ENSACAG00000015269	A1CF	100	73.208	ENSMALG00000012992	a1cf	100	73.208	Monopterus_albus
ENSACAG00000015269	A1CF	100	82.653	MGP_CAROLIEiJ_G0022873	A1cf	100	83.333	Mus_caroli
ENSACAG00000015269	A1CF	100	82.653	ENSMUSG00000052595	A1cf	99	86.614	Mus_musculus
ENSACAG00000015269	A1CF	100	82.823	MGP_PahariEiJ_G0014366	A1cf	100	82.823	Mus_pahari
ENSACAG00000015269	A1CF	100	82.624	MGP_SPRETEiJ_G0023792	A1cf	100	83.305	Mus_spretus
ENSACAG00000015269	A1CF	100	76.728	ENSMPUG00000016971	A1CF	100	77.572	Mustela_putorius_furo
ENSACAG00000015269	A1CF	100	82.047	ENSMLUG00000016071	A1CF	100	82.886	Myotis_lucifugus
ENSACAG00000015269	A1CF	100	82.047	ENSNGAG00000015136	A1cf	100	82.215	Nannospalax_galili
ENSACAG00000015269	A1CF	100	76.033	ENSNBRG00000001712	a1cf	100	77.851	Neolamprologus_brichardi
ENSACAG00000015269	A1CF	100	83.054	ENSNLEG00000012028	A1CF	100	83.221	Nomascus_leucogenys
ENSACAG00000015269	A1CF	94	86.727	ENSMEUG00000015909	A1CF	100	86.727	Notamacropus_eugenii
ENSACAG00000015269	A1CF	89	74.715	ENSOPRG00000010667	A1CF	98	73.978	Ochotona_princeps
ENSACAG00000015269	A1CF	100	76.198	ENSONIG00000019105	a1cf	100	77.025	Oreochromis_niloticus
ENSACAG00000015269	A1CF	79	84.532	ENSOANG00000007360	A1CF	99	84.532	Ornithorhynchus_anatinus
ENSACAG00000015269	A1CF	100	83.192	ENSOCUG00000011587	A1CF	100	83.192	Oryctolagus_cuniculus
ENSACAG00000015269	A1CF	100	75.041	ENSORLG00000013342	a1cf	100	74.135	Oryzias_latipes
ENSACAG00000015269	A1CF	100	73.977	ENSORLG00020000586	a1cf	100	74.468	Oryzias_latipes_hni
ENSACAG00000015269	A1CF	100	73.977	ENSORLG00015018569	a1cf	100	74.468	Oryzias_latipes_hsok
ENSACAG00000015269	A1CF	100	75.290	ENSOMEG00000013531	a1cf	100	75.290	Oryzias_melastigma
ENSACAG00000015269	A1CF	100	82.462	ENSOGAG00000012884	A1CF	100	82.968	Otolemur_garnettii
ENSACAG00000015269	A1CF	100	82.886	ENSOARG00000013695	A1CF	100	83.054	Ovis_aries
ENSACAG00000015269	A1CF	97	81.802	ENSPPAG00000028115	A1CF	99	86.235	Pan_paniscus
ENSACAG00000015269	A1CF	100	81.619	ENSPPRG00000012180	A1CF	100	82.631	Panthera_pardus
ENSACAG00000015269	A1CF	100	81.619	ENSPTIG00000021223	A1CF	100	82.631	Panthera_tigris_altaica
ENSACAG00000015269	A1CF	100	83.986	ENSPTRG00000002508	A1CF	100	84.327	Pan_troglodytes
ENSACAG00000015269	A1CF	100	84.957	ENSPANG00000021988	A1CF	100	84.957	Papio_anubis
ENSACAG00000015269	A1CF	100	78.224	ENSPKIG00000025176	a1cf	100	78.224	Paramormyrops_kingsleyae
ENSACAG00000015269	A1CF	100	87.973	ENSPSIG00000010318	A1CF	100	87.973	Pelodiscus_sinensis
ENSACAG00000015269	A1CF	98	67.304	ENSPMGG00000013359	a1cf	92	70.412	Periophthalmus_magnuspinnatus
ENSACAG00000015269	A1CF	100	83.221	ENSPEMG00000015021	A1cf	100	83.221	Peromyscus_maniculatus_bairdii
ENSACAG00000015269	A1CF	100	85.763	ENSPCIG00000002175	A1CF	100	85.763	Phascolarctos_cinereus
ENSACAG00000015269	A1CF	100	75.407	ENSPFOG00000007437	-	100	75.896	Poecilia_formosa
ENSACAG00000015269	A1CF	100	75.570	ENSPFOG00000006683	a1cf	100	76.059	Poecilia_formosa
ENSACAG00000015269	A1CF	100	76.403	ENSPLAG00000000026	a1cf	100	76.898	Poecilia_latipinna
ENSACAG00000015269	A1CF	100	76.403	ENSPLAG00000001210	-	100	76.898	Poecilia_latipinna
ENSACAG00000015269	A1CF	100	69.536	ENSPMEG00000000921	a1cf	100	70.033	Poecilia_mexicana
ENSACAG00000015269	A1CF	100	68.627	ENSPMEG00000015529	-	100	69.118	Poecilia_mexicana
ENSACAG00000015269	A1CF	100	75.407	ENSPREG00000016298	a1cf	100	76.059	Poecilia_reticulata
ENSACAG00000015269	A1CF	100	84.184	ENSPPYG00000002819	A1CF	100	84.354	Pongo_abelii
ENSACAG00000015269	A1CF	79	66.667	ENSPCAG00000006463	A1CF	62	75.549	Procavia_capensis
ENSACAG00000015269	A1CF	100	82.412	ENSPCOG00000024172	A1CF	100	82.747	Propithecus_coquereli
ENSACAG00000015269	A1CF	100	74.878	ENSPNYG00000017944	a1cf	100	76.672	Pundamilia_nyererei
ENSACAG00000015269	A1CF	100	78.859	ENSPNAG00000007704	a1cf	100	78.859	Pygocentrus_nattereri
ENSACAG00000015269	A1CF	100	83.673	ENSRNOG00000033195	A1cf	100	83.333	Rattus_norvegicus
ENSACAG00000015269	A1CF	100	77.311	ENSRBIG00000042892	A1CF	100	83.234	Rhinopithecus_bieti
ENSACAG00000015269	A1CF	100	83.811	ENSRROG00000041398	A1CF	99	85.507	Rhinopithecus_roxellana
ENSACAG00000015269	A1CF	100	83.697	ENSSBOG00000021930	A1CF	100	84.294	Saimiri_boliviensis_boliviensis
ENSACAG00000015269	A1CF	100	85.983	ENSSHAG00000005096	A1CF	100	85.983	Sarcophilus_harrisii
ENSACAG00000015269	A1CF	100	78.992	ENSSFOG00015011774	a1cf	100	79.496	Scleropages_formosus
ENSACAG00000015269	A1CF	100	75.081	ENSSMAG00000013271	a1cf	100	75.407	Scophthalmus_maximus
ENSACAG00000015269	A1CF	100	75.954	ENSSDUG00000013930	a1cf	100	75.954	Seriola_dumerili
ENSACAG00000015269	A1CF	100	70.903	ENSSLDG00000004290	a1cf	100	70.569	Seriola_lalandi_dorsalis
ENSACAG00000015269	A1CF	95	74.910	ENSSARG00000005940	A1CF	95	75.806	Sorex_araneus
ENSACAG00000015269	A1CF	97	85.614	ENSSPUG00000006797	A1CF	96	85.614	Sphenodon_punctatus
ENSACAG00000015269	A1CF	100	83.221	ENSSSCG00000010431	A1CF	100	83.557	Sus_scrofa
ENSACAG00000015269	A1CF	100	85.452	ENSTGUG00000005090	A1CF	100	85.452	Taeniopygia_guttata
ENSACAG00000015269	A1CF	100	71.941	ENSTRUG00000001982	a1cf	100	71.941	Takifugu_rubripes
ENSACAG00000015269	A1CF	100	72.846	ENSTNIG00000003580	a1cf	100	73.008	Tetraodon_nigroviridis
ENSACAG00000015269	A1CF	97	78.246	ENSTTRG00000013190	A1CF	95	78.772	Tursiops_truncatus
ENSACAG00000015269	A1CF	100	83.761	ENSUAMG00000020065	A1CF	100	84.103	Ursus_americanus
ENSACAG00000015269	A1CF	100	82.741	ENSUMAG00000011162	A1CF	100	83.080	Ursus_maritimus
ENSACAG00000015269	A1CF	87	81.323	ENSVPAG00000006130	A1CF	86	81.323	Vicugna_pacos
ENSACAG00000015269	A1CF	100	84.589	ENSVVUG00000002504	A1CF	99	86.704	Vulpes_vulpes
ENSACAG00000015269	A1CF	100	77.441	ENSXETG00000006611	a1cf	100	77.441	Xenopus_tropicalis
ENSACAG00000015269	A1CF	100	77.741	ENSXCOG00000003302	a1cf	100	77.741	Xiphophorus_couchianus
ENSACAG00000015269	A1CF	100	76.721	ENSXMAG00000016703	a1cf	100	76.721	Xiphophorus_maculatus