EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000015271 (Gene tree)
Gene ID: 100553177
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 62405 bases
Position: chr4:71461051-71523455
Accession: 100553177
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000015064	zf-CCCH	PF00642.24	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000015368	RC3H1-201	4130	XM_003219864	ENSACAP00000015064	1134 (aa)	XP_003219912	G1KQZ5

Gene Model

Click here to download ENSACAG00000015271's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000015271's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000015271	RC3H1	100	85.253	ENSG00000135870	RC3H1	100	85.253	Homo_sapiens
ENSACAG00000015271	RC3H1	100	85.127	ENSAMEG00000015657	RC3H1	100	85.240	Ailuropoda_melanoleuca
ENSACAG00000015271	RC3H1	100	85.913	ENSAPLG00000005341	RC3H1	100	86.000	Anas_platyrhynchos
ENSACAG00000015271	RC3H1	100	85.166	ENSANAG00000036716	RC3H1	100	85.166	Aotus_nancymaae
ENSACAG00000015271	RC3H1	100	83.654	ENSBTAG00000052708	RC3H1	100	84.031	Bos_taurus
ENSACAG00000015271	RC3H1	100	85.079	ENSCJAG00000009106	RC3H1	100	85.079	Callithrix_jacchus
ENSACAG00000015271	RC3H1	100	85.039	ENSCAFG00000014434	RC3H1	100	85.415	Canis_familiaris
ENSACAG00000015271	RC3H1	100	84.965	ENSCAFG00020017112	RC3H1	99	96.429	Canis_lupus_dingo
ENSACAG00000015271	RC3H1	100	83.990	ENSCHIG00000002873	RC3H1	100	84.367	Capra_hircus
ENSACAG00000015271	RC3H1	99	83.552	ENSTSYG00000003913	RC3H1	99	83.755	Carlito_syrichta
ENSACAG00000015271	RC3H1	100	81.611	ENSCPOG00000004349	RC3H1	100	81.349	Cavia_porcellus
ENSACAG00000015271	RC3H1	100	83.843	ENSCCAG00000025652	RC3H1	98	86.497	Cebus_capucinus
ENSACAG00000015271	RC3H1	100	85.515	ENSCATG00000033497	RC3H1	100	85.515	Cercocebus_atys
ENSACAG00000015271	RC3H1	100	83.843	ENSCLAG00000011267	RC3H1	100	84.031	Chinchilla_lanigera
ENSACAG00000015271	RC3H1	96	86.575	ENSCSAG00000011823	RC3H1	84	86.575	Chlorocebus_sabaeus
ENSACAG00000015271	RC3H1	100	87.489	ENSCPBG00000014670	RC3H1	100	87.489	Chrysemys_picta_bellii
ENSACAG00000015271	RC3H1	100	85.602	ENSCANG00000032120	RC3H1	100	85.602	Colobus_angolensis_palliatus
ENSACAG00000015271	RC3H1	100	83.713	ENSCGRG00001020812	Rc3h1	100	83.829	Cricetulus_griseus_chok1gshd
ENSACAG00000015271	RC3H1	100	83.713	ENSCGRG00000011952	Rc3h1	100	83.829	Cricetulus_griseus_crigri
ENSACAG00000015271	RC3H1	55	79.650	ENSDNOG00000011494	RC3H1	99	79.650	Dasypus_novemcinctus
ENSACAG00000015271	RC3H1	100	84.063	ENSDORG00000004855	Rc3h1	100	84.178	Dipodomys_ordii
ENSACAG00000015271	RC3H1	82	86.342	ENSETEG00000012064	RC3H1	87	86.848	Echinops_telfairi
ENSACAG00000015271	RC3H1	100	84.164	ENSEASG00005017000	RC3H1	100	84.454	Equus_asinus_asinus
ENSACAG00000015271	RC3H1	100	84.077	ENSECAG00000021208	RC3H1	100	84.367	Equus_caballus
ENSACAG00000015271	RC3H1	88	80.258	ENSEEUG00000014861	RC3H1	93	80.258	Erinaceus_europaeus
ENSACAG00000015271	RC3H1	100	84.790	ENSFCAG00000014924	RC3H1	100	85.166	Felis_catus
ENSACAG00000015271	RC3H1	100	84.669	ENSFALG00000002947	RC3H1	100	84.408	Ficedula_albicollis
ENSACAG00000015271	RC3H1	100	84.017	ENSFDAG00000013303	RC3H1	100	84.206	Fukomys_damarensis
ENSACAG00000015271	RC3H1	100	85.289	ENSGALG00000004587	RC3H1	100	85.377	Gallus_gallus
ENSACAG00000015271	RC3H1	93	95.248	ENSGAGG00000018194	RC3H1	100	85.827	Gopherus_agassizii
ENSACAG00000015271	RC3H1	100	80.296	ENSGGOG00000005735	RC3H1	100	80.296	Gorilla_gorilla
ENSACAG00000015271	RC3H1	88	80.133	ENSHGLG00000004183	-	100	80.133	Heterocephalus_glaber_female
ENSACAG00000015271	RC3H1	100	83.493	ENSHGLG00100008577	RC3H1	100	83.770	Heterocephalus_glaber_male
ENSACAG00000015271	RC3H1	100	84.077	ENSSTOG00000016033	RC3H1	100	84.629	Ictidomys_tridecemlineatus
ENSACAG00000015271	RC3H1	100	83.860	ENSJJAG00000018915	Rc3h1	100	83.888	Jaculus_jaculus
ENSACAG00000015271	RC3H1	100	73.826	ENSLACG00000016186	RC3H1	100	77.720	Latimeria_chalumnae
ENSACAG00000015271	RC3H1	97	85.727	ENSLAFG00000004367	RC3H1	99	86.204	Loxodonta_africana
ENSACAG00000015271	RC3H1	100	85.340	ENSMFAG00000033725	RC3H1	100	85.340	Macaca_fascicularis
ENSACAG00000015271	RC3H1	100	85.253	ENSMMUG00000000630	RC3H1	100	85.253	Macaca_mulatta
ENSACAG00000015271	RC3H1	100	85.428	ENSMNEG00000035968	RC3H1	100	85.428	Macaca_nemestrina
ENSACAG00000015271	RC3H1	100	85.515	ENSMLEG00000037455	RC3H1	100	85.515	Mandrillus_leucophaeus
ENSACAG00000015271	RC3H1	98	84.845	ENSMAUG00000020864	Rc3h1	100	84.975	Mesocricetus_auratus
ENSACAG00000015271	RC3H1	100	84.602	ENSMICG00000003000	RC3H1	100	85.066	Microcebus_murinus
ENSACAG00000015271	RC3H1	93	81.861	ENSMOCG00000016587	Rc3h1	98	81.895	Microtus_ochrogaster
ENSACAG00000015271	RC3H1	100	84.105	ENSMODG00000004289	RC3H1	100	84.045	Monodelphis_domestica
ENSACAG00000015271	RC3H1	100	83.202	MGP_CAROLIEiJ_G0014756	Rc3h1	100	83.027	Mus_caroli
ENSACAG00000015271	RC3H1	100	83.129	ENSMUSG00000040423	Rc3h1	100	82.955	Mus_musculus
ENSACAG00000015271	RC3H1	100	83.479	MGP_PahariEiJ_G0027992	Rc3h1	100	83.304	Mus_pahari
ENSACAG00000015271	RC3H1	100	83.129	MGP_SPRETEiJ_G0015563	Rc3h1	100	82.955	Mus_spretus
ENSACAG00000015271	RC3H1	100	84.878	ENSMPUG00000004747	RC3H1	100	84.991	Mustela_putorius_furo
ENSACAG00000015271	RC3H1	100	83.552	ENSMLUG00000011127	RC3H1	100	84.017	Myotis_lucifugus
ENSACAG00000015271	RC3H1	100	84.238	ENSNGAG00000011135	Rc3h1	100	84.441	Nannospalax_galili
ENSACAG00000015271	RC3H1	100	85.340	ENSNLEG00000015327	RC3H1	100	85.340	Nomascus_leucogenys
ENSACAG00000015271	RC3H1	99	73.333	ENSOPRG00000013068	RC3H1	99	73.357	Ochotona_princeps
ENSACAG00000015271	RC3H1	100	84.017	ENSODEG00000014185	RC3H1	100	84.031	Octodon_degus
ENSACAG00000015271	RC3H1	100	84.343	ENSOANG00000000924	RC3H1	100	84.170	Ornithorhynchus_anatinus
ENSACAG00000015271	RC3H1	99	85.182	ENSOCUG00000004930	RC3H1	98	85.740	Oryctolagus_cuniculus
ENSACAG00000015271	RC3H1	100	77.729	ENSOGAG00000004044	RC3H1	100	77.942	Otolemur_garnettii
ENSACAG00000015271	RC3H1	100	84.174	ENSOARG00000013011	RC3H1	100	84.549	Ovis_aries
ENSACAG00000015271	RC3H1	100	85.428	ENSPPAG00000039253	RC3H1	100	85.428	Pan_paniscus
ENSACAG00000015271	RC3H1	100	84.427	ENSPPRG00000009007	RC3H1	100	84.803	Panthera_pardus
ENSACAG00000015271	RC3H1	100	84.843	ENSPTIG00000015326	RC3H1	100	85.217	Panthera_tigris_altaica
ENSACAG00000015271	RC3H1	100	85.428	ENSPTRG00000001702	RC3H1	100	85.428	Pan_troglodytes
ENSACAG00000015271	RC3H1	100	85.340	ENSPANG00000008886	RC3H1	100	85.340	Papio_anubis
ENSACAG00000015271	RC3H1	100	86.114	ENSPSIG00000016181	RC3H1	100	86.201	Pelodiscus_sinensis
ENSACAG00000015271	RC3H1	100	83.129	ENSPEMG00000011966	Rc3h1	100	83.304	Peromyscus_maniculatus_bairdii
ENSACAG00000015271	RC3H1	71	86.757	ENSPCIG00000002058	RC3H1	95	96.659	Phascolarctos_cinereus
ENSACAG00000015271	RC3H1	100	83.552	ENSPPYG00000000490	RC3H1	98	86.308	Pongo_abelii
ENSACAG00000015271	RC3H1	80	89.474	ENSPCAG00000010775	RC3H1	87	89.474	Procavia_capensis
ENSACAG00000015271	RC3H1	82	82.609	ENSPCOG00000021795	RC3H1	96	83.175	Propithecus_coquereli
ENSACAG00000015271	RC3H1	100	76.903	ENSPVAG00000007593	RC3H1	100	77.205	Pteropus_vampyrus
ENSACAG00000015271	RC3H1	97	61.077	ENSPNAG00000023439	rc3h1a	95	90.380	Pygocentrus_nattereri
ENSACAG00000015271	RC3H1	100	85.515	ENSRBIG00000037743	RC3H1	100	85.515	Rhinopithecus_bieti
ENSACAG00000015271	RC3H1	100	85.253	ENSRROG00000036546	RC3H1	100	85.253	Rhinopithecus_roxellana
ENSACAG00000015271	RC3H1	93	78.069	ENSSBOG00000010664	RC3H1	100	79.268	Saimiri_boliviensis_boliviensis
ENSACAG00000015271	RC3H1	100	83.871	ENSSHAG00000007589	RC3H1	100	83.537	Sarcophilus_harrisii
ENSACAG00000015271	RC3H1	87	86.130	ENSSARG00000004660	RC3H1	86	86.130	Sorex_araneus
ENSACAG00000015271	RC3H1	100	84.252	ENSSPUG00000018472	RC3H1	100	84.252	Sphenodon_punctatus
ENSACAG00000015271	RC3H1	100	85.302	ENSSSCG00000015498	RC3H1	100	85.677	Sus_scrofa
ENSACAG00000015271	RC3H1	100	85.214	ENSTGUG00000004090	RC3H1	100	85.302	Taeniopygia_guttata
ENSACAG00000015271	RC3H1	89	88.829	ENSTBEG00000005015	RC3H1	89	89.530	Tupaia_belangeri
ENSACAG00000015271	RC3H1	100	84.380	ENSTTRG00000008572	RC3H1	100	84.756	Tursiops_truncatus
ENSACAG00000015271	RC3H1	100	84.777	ENSUAMG00000019525	RC3H1	100	84.891	Ursus_americanus
ENSACAG00000015271	RC3H1	100	85.214	ENSUMAG00000020087	RC3H1	100	85.328	Ursus_maritimus
ENSACAG00000015271	RC3H1	91	96.868	ENSVPAG00000002591	RC3H1	92	96.868	Vicugna_pacos
ENSACAG00000015271	RC3H1	100	84.917	ENSVVUG00000014201	RC3H1	93	95.165	Vulpes_vulpes
ENSACAG00000015271	RC3H1	100	76.128	ENSXETG00000020030	rc3h1	100	75.955	Xenopus_tropicalis