EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000015481 (Gene tree)
Gene ID: 100554462
Gene Symbol: USB1
Alias: C16orf57|FLJ13154|HVSL1|Mpn1
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 7346 bases
Position: chrGL344621.1:65-7410
Accession: 100554462
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000015226	HVSL	PF09749.9	1.4e-61	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000015534	USB1-201	984	XM_003230225	ENSACAP00000015226	229 (aa)	XP_003230273	H9GME5

Gene Model

Click here to download ENSACAG00000015481's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000015481's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000015481	USB1	100	64.192	ENSG00000103005	USB1	98	65.550	Homo_sapiens
ENSACAG00000015481	USB1	99	51.316	ENSAPOG00000011942	usb1	80	51.316	Acanthochromis_polyacanthus
ENSACAG00000015481	USB1	100	62.009	ENSAMEG00000017205	USB1	84	62.009	Ailuropoda_melanoleuca
ENSACAG00000015481	USB1	98	51.111	ENSACIG00000012234	usb1	82	51.111	Amphilophus_citrinellus
ENSACAG00000015481	USB1	99	51.754	ENSAOCG00000014831	usb1	80	51.754	Amphiprion_ocellaris
ENSACAG00000015481	USB1	99	52.193	ENSAPEG00000000296	usb1	80	52.193	Amphiprion_percula
ENSACAG00000015481	USB1	99	51.101	ENSATEG00000009348	usb1	80	51.101	Anabas_testudineus
ENSACAG00000015481	USB1	99	69.912	ENSAPLG00000002756	USB1	100	69.912	Anas_platyrhynchos
ENSACAG00000015481	USB1	100	62.882	ENSANAG00000035640	USB1	86	62.882	Aotus_nancymaae
ENSACAG00000015481	USB1	98	51.542	ENSACLG00000020586	usb1	79	51.542	Astatotilapia_calliptera
ENSACAG00000015481	USB1	99	53.304	ENSAMXG00000040146	usb1	75	53.304	Astyanax_mexicanus
ENSACAG00000015481	USB1	100	63.319	ENSBTAG00000015758	USB1	86	63.319	Bos_taurus
ENSACAG00000015481	USB1	100	64.192	ENSCJAG00000011733	USB1	86	64.192	Callithrix_jacchus
ENSACAG00000015481	USB1	99	62.719	ENSCAFG00000008556	USB1	60	62.719	Canis_familiaris
ENSACAG00000015481	USB1	99	62.719	ENSCAFG00020009263	USB1	85	62.719	Canis_lupus_dingo
ENSACAG00000015481	USB1	100	62.882	ENSCHIG00000024290	USB1	86	62.882	Capra_hircus
ENSACAG00000015481	USB1	100	62.009	ENSTSYG00000006997	USB1	86	62.009	Carlito_syrichta
ENSACAG00000015481	USB1	99	51.770	ENSCAPG00000009057	USB1	96	51.770	Cavia_aperea
ENSACAG00000015481	USB1	99	62.389	ENSCPOG00000014325	USB1	83	62.389	Cavia_porcellus
ENSACAG00000015481	USB1	100	63.755	ENSCCAG00000022132	USB1	86	63.755	Cebus_capucinus
ENSACAG00000015481	USB1	100	64.629	ENSCATG00000032174	USB1	86	64.629	Cercocebus_atys
ENSACAG00000015481	USB1	76	60.571	ENSCLAG00000007363	USB1	99	60.571	Chinchilla_lanigera
ENSACAG00000015481	USB1	100	64.192	ENSCSAG00000004783	USB1	86	64.192	Chlorocebus_sabaeus
ENSACAG00000015481	USB1	100	66.812	ENSCPBG00000026943	USB1	82	66.812	Chrysemys_picta_bellii
ENSACAG00000015481	USB1	99	64.602	ENSCANG00000037135	USB1	85	64.602	Colobus_angolensis_palliatus
ENSACAG00000015481	USB1	100	62.882	ENSCGRG00001011243	USB1	85	62.882	Cricetulus_griseus_chok1gshd
ENSACAG00000015481	USB1	100	62.882	ENSCGRG00000013252	USB1	85	62.882	Cricetulus_griseus_crigri
ENSACAG00000015481	USB1	98	50.667	ENSCSEG00000013881	usb1	80	50.667	Cynoglossus_semilaevis
ENSACAG00000015481	USB1	99	48.684	ENSCVAG00000009252	usb1	97	48.684	Cyprinodon_variegatus
ENSACAG00000015481	USB1	99	52.193	ENSDARG00000003841	usb1	82	52.193	Danio_rerio
ENSACAG00000015481	USB1	100	62.445	ENSDORG00000001888	Usb1	86	62.445	Dipodomys_ordii
ENSACAG00000015481	USB1	89	37.561	FBgn0037713	CG16790	78	37.561	Drosophila_melanogaster
ENSACAG00000015481	USB1	100	53.712	ENSETEG00000019682	USB1	85	53.712	Echinops_telfairi
ENSACAG00000015481	USB1	98	47.768	ENSEBUG00000005889	usb1	78	47.768	Eptatretus_burgeri
ENSACAG00000015481	USB1	100	64.192	ENSEASG00005005484	USB1	86	64.192	Equus_asinus_asinus
ENSACAG00000015481	USB1	99	64.474	ENSECAG00000019493	USB1	78	64.474	Equus_caballus
ENSACAG00000015481	USB1	76	55.429	ENSEEUG00000000154	USB1	66	55.429	Erinaceus_europaeus
ENSACAG00000015481	USB1	100	51.965	ENSELUG00000010974	usb1	84	51.965	Esox_lucius
ENSACAG00000015481	USB1	100	62.445	ENSFCAG00000002693	USB1	85	62.445	Felis_catus
ENSACAG00000015481	USB1	99	66.079	ENSFALG00000006876	USB1	84	66.079	Ficedula_albicollis
ENSACAG00000015481	USB1	99	62.832	ENSFDAG00000010052	USB1	84	62.832	Fukomys_damarensis
ENSACAG00000015481	USB1	85	51.282	ENSFHEG00000012334	usb1	77	52.308	Fundulus_heteroclitus
ENSACAG00000015481	USB1	98	51.556	ENSGMOG00000004228	usb1	99	51.556	Gadus_morhua
ENSACAG00000015481	USB1	98	66.667	ENSGALG00000035604	USB1	88	66.814	Gallus_gallus
ENSACAG00000015481	USB1	100	51.965	ENSGAFG00000021890	usb1	82	51.965	Gambusia_affinis
ENSACAG00000015481	USB1	98	49.333	ENSGACG00000003257	usb1	80	49.333	Gasterosteus_aculeatus
ENSACAG00000015481	USB1	100	65.939	ENSGAGG00000022572	USB1	83	65.939	Gopherus_agassizii
ENSACAG00000015481	USB1	100	63.755	ENSGGOG00000017147	USB1	86	63.755	Gorilla_gorilla
ENSACAG00000015481	USB1	99	51.304	ENSHBUG00000009823	usb1	80	51.304	Haplochromis_burtoni
ENSACAG00000015481	USB1	100	63.755	ENSHGLG00000016078	USB1	83	63.755	Heterocephalus_glaber_female
ENSACAG00000015481	USB1	100	63.755	ENSHGLG00100005562	USB1	83	63.755	Heterocephalus_glaber_male
ENSACAG00000015481	USB1	95	50.917	ENSHCOG00000015633	usb1	86	50.667	Hippocampus_comes
ENSACAG00000015481	USB1	99	54.825	ENSIPUG00000008601	usb1	78	54.825	Ictalurus_punctatus
ENSACAG00000015481	USB1	100	63.319	ENSSTOG00000007548	USB1	83	63.319	Ictidomys_tridecemlineatus
ENSACAG00000015481	USB1	100	62.882	ENSJJAG00000021859	Usb1	85	62.882	Jaculus_jaculus
ENSACAG00000015481	USB1	99	52.632	ENSKMAG00000007200	usb1	80	52.632	Kryptolebias_marmoratus
ENSACAG00000015481	USB1	87	51.000	ENSLBEG00000008452	usb1	65	51.031	Labrus_bergylta
ENSACAG00000015481	USB1	84	64.249	ENSLACG00000000105	USB1	66	64.249	Latimeria_chalumnae
ENSACAG00000015481	USB1	99	56.637	ENSLOCG00000000465	usb1	82	55.794	Lepisosteus_oculatus
ENSACAG00000015481	USB1	99	52.814	ENSLAFG00000002267	USB1	83	52.814	Loxodonta_africana
ENSACAG00000015481	USB1	100	64.192	ENSMFAG00000003926	USB1	86	64.192	Macaca_fascicularis
ENSACAG00000015481	USB1	100	64.192	ENSMMUG00000022669	USB1	86	64.192	Macaca_mulatta
ENSACAG00000015481	USB1	100	63.755	ENSMNEG00000042487	USB1	86	63.755	Macaca_nemestrina
ENSACAG00000015481	USB1	100	64.192	ENSMLEG00000028756	USB1	86	64.192	Mandrillus_leucophaeus
ENSACAG00000015481	USB1	98	50.667	ENSMAMG00000015092	usb1	80	50.667	Mastacembelus_armatus
ENSACAG00000015481	USB1	98	51.542	ENSMZEG00005010008	usb1	79	51.542	Maylandia_zebra
ENSACAG00000015481	USB1	100	63.755	ENSMAUG00000007832	Usb1	85	63.755	Mesocricetus_auratus
ENSACAG00000015481	USB1	100	65.066	ENSMICG00000004900	USB1	86	65.066	Microcebus_murinus
ENSACAG00000015481	USB1	100	62.445	ENSMOCG00000022647	Usb1	85	62.445	Microtus_ochrogaster
ENSACAG00000015481	USB1	99	53.540	ENSMMOG00000000490	usb1	87	53.982	Mola_mola
ENSACAG00000015481	USB1	96	62.727	ENSMODG00000014067	USB1	85	62.445	Monodelphis_domestica
ENSACAG00000015481	USB1	99	50.000	ENSMALG00000005930	usb1	80	50.000	Monopterus_albus
ENSACAG00000015481	USB1	100	64.192	MGP_CAROLIEiJ_G0031421	Usb1	96	64.815	Mus_caroli
ENSACAG00000015481	USB1	100	63.755	ENSMUSG00000031792	Usb1	96	63.889	Mus_musculus
ENSACAG00000015481	USB1	100	62.445	MGP_PahariEiJ_G0023019	Usb1	96	63.393	Mus_pahari
ENSACAG00000015481	USB1	100	62.882	MGP_SPRETEiJ_G0032540	Usb1	85	62.882	Mus_spretus
ENSACAG00000015481	USB1	100	62.009	ENSMPUG00000004684	USB1	81	62.009	Mustela_putorius_furo
ENSACAG00000015481	USB1	100	65.066	ENSMLUG00000007400	USB1	98	65.066	Myotis_lucifugus
ENSACAG00000015481	USB1	100	62.882	ENSNGAG00000009703	Usb1	84	62.882	Nannospalax_galili
ENSACAG00000015481	USB1	99	46.957	ENSNBRG00000008747	usb1	98	51.415	Neolamprologus_brichardi
ENSACAG00000015481	USB1	92	63.810	ENSNLEG00000003340	USB1	83	63.810	Nomascus_leucogenys
ENSACAG00000015481	USB1	100	43.668	ENSOPRG00000011803	USB1	98	43.668	Ochotona_princeps
ENSACAG00000015481	USB1	100	62.009	ENSODEG00000016214	USB1	85	62.009	Octodon_degus
ENSACAG00000015481	USB1	99	50.877	ENSONIG00000011063	usb1	81	50.877	Oreochromis_niloticus
ENSACAG00000015481	USB1	99	64.758	ENSOANG00000012118	USB1	95	64.758	Ornithorhynchus_anatinus
ENSACAG00000015481	USB1	98	49.778	ENSORLG00000012479	usb1	82	49.778	Oryzias_latipes
ENSACAG00000015481	USB1	98	50.222	ENSORLG00020018671	usb1	82	50.222	Oryzias_latipes_hni
ENSACAG00000015481	USB1	98	49.778	ENSORLG00015009679	usb1	82	49.778	Oryzias_latipes_hsok
ENSACAG00000015481	USB1	98	49.778	ENSOMEG00000012930	usb1	80	49.778	Oryzias_melastigma
ENSACAG00000015481	USB1	100	58.952	ENSOGAG00000003273	USB1	85	58.952	Otolemur_garnettii
ENSACAG00000015481	USB1	100	62.882	ENSOARG00000001107	USB1	87	62.882	Ovis_aries
ENSACAG00000015481	USB1	100	63.755	ENSPPAG00000042137	USB1	86	63.755	Pan_paniscus
ENSACAG00000015481	USB1	100	62.009	ENSPPRG00000024797	USB1	85	62.009	Panthera_pardus
ENSACAG00000015481	USB1	100	61.572	ENSPTIG00000007506	USB1	85	61.572	Panthera_tigris_altaica
ENSACAG00000015481	USB1	100	58.952	ENSPTRG00000008172	USB1	98	65.550	Pan_troglodytes
ENSACAG00000015481	USB1	100	64.192	ENSPANG00000025138	USB1	86	64.192	Papio_anubis
ENSACAG00000015481	USB1	99	54.425	ENSPKIG00000015109	usb1	75	54.425	Paramormyrops_kingsleyae
ENSACAG00000015481	USB1	99	53.017	ENSPSIG00000004305	USB1	100	53.017	Pelodiscus_sinensis
ENSACAG00000015481	USB1	98	52.000	ENSPMGG00000017725	usb1	85	52.000	Periophthalmus_magnuspinnatus
ENSACAG00000015481	USB1	100	62.882	ENSPEMG00000016183	Usb1	83	62.882	Peromyscus_maniculatus_bairdii
ENSACAG00000015481	USB1	99	51.327	ENSPMAG00000000462	usb1	95	51.327	Petromyzon_marinus
ENSACAG00000015481	USB1	100	51.965	ENSPFOG00000011130	usb1	82	51.965	Poecilia_formosa
ENSACAG00000015481	USB1	100	51.528	ENSPLAG00000009820	usb1	82	51.528	Poecilia_latipinna
ENSACAG00000015481	USB1	100	51.965	ENSPMEG00000006402	usb1	82	51.965	Poecilia_mexicana
ENSACAG00000015481	USB1	85	52.308	ENSPREG00000001047	usb1	78	52.821	Poecilia_reticulata
ENSACAG00000015481	USB1	94	59.722	ENSPPYG00000007401	USB1	85	59.722	Pongo_abelii
ENSACAG00000015481	USB1	100	63.319	ENSPCOG00000022612	USB1	86	63.319	Propithecus_coquereli
ENSACAG00000015481	USB1	99	61.504	ENSPVAG00000004613	USB1	86	61.504	Pteropus_vampyrus
ENSACAG00000015481	USB1	99	51.739	ENSPNYG00000022262	usb1	80	51.739	Pundamilia_nyererei
ENSACAG00000015481	USB1	99	53.070	ENSPNAG00000011736	usb1	77	53.304	Pygocentrus_nattereri
ENSACAG00000015481	USB1	100	61.572	ENSRNOG00000013216	Usb1	85	61.572	Rattus_norvegicus
ENSACAG00000015481	USB1	100	58.952	ENSRBIG00000044466	USB1	98	65.550	Rhinopithecus_bieti
ENSACAG00000015481	USB1	100	64.192	ENSRROG00000029211	USB1	86	64.192	Rhinopithecus_roxellana
ENSACAG00000015481	USB1	100	64.192	ENSSBOG00000029362	USB1	86	64.192	Saimiri_boliviensis_boliviensis
ENSACAG00000015481	USB1	97	62.443	ENSSHAG00000006993	USB1	90	62.445	Sarcophilus_harrisii
ENSACAG00000015481	USB1	99	54.185	ENSSFOG00015023663	usb1	71	54.185	Scleropages_formosus
ENSACAG00000015481	USB1	98	49.791	ENSSMAG00000015834	usb1	80	49.791	Scophthalmus_maximus
ENSACAG00000015481	USB1	98	53.333	ENSSDUG00000002949	usb1	83	53.333	Seriola_dumerili
ENSACAG00000015481	USB1	98	53.333	ENSSLDG00000014174	usb1	79	53.333	Seriola_lalandi_dorsalis
ENSACAG00000015481	USB1	94	67.593	ENSSPUG00000006741	USB1	100	67.593	Sphenodon_punctatus
ENSACAG00000015481	USB1	99	50.877	ENSSPAG00000007484	usb1	79	50.877	Stegastes_partitus
ENSACAG00000015481	USB1	99	64.602	ENSSSCG00000002807	USB1	83	64.602	Sus_scrofa
ENSACAG00000015481	USB1	92	69.194	ENSTGUG00000004792	USB1	83	69.194	Taeniopygia_guttata
ENSACAG00000015481	USB1	100	49.345	ENSTRUG00000021069	usb1	84	49.345	Takifugu_rubripes
ENSACAG00000015481	USB1	99	46.460	ENSTNIG00000000626	usb1	83	46.460	Tetraodon_nigroviridis
ENSACAG00000015481	USB1	99	45.575	ENSTBEG00000001507	USB1	97	45.575	Tupaia_belangeri
ENSACAG00000015481	USB1	100	62.445	ENSUAMG00000016823	USB1	84	62.445	Ursus_americanus
ENSACAG00000015481	USB1	94	62.500	ENSUMAG00000021369	USB1	100	62.500	Ursus_maritimus
ENSACAG00000015481	USB1	52	58.333	ENSVPAG00000009834	-	59	58.333	Vicugna_pacos
ENSACAG00000015481	USB1	99	62.719	ENSVVUG00000023700	USB1	87	62.719	Vulpes_vulpes
ENSACAG00000015481	USB1	96	54.795	ENSXETG00000013795	usb1	90	54.425	Xenopus_tropicalis
ENSACAG00000015481	USB1	100	51.965	ENSXMAG00000024687	usb1	67	51.965	Xiphophorus_maculatus