EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000015721 (Gene tree)
Gene ID: 100552525
Gene Symbol: SNRPC
Alias: U1-C|Yhc1
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 5424 bases
Position: chr4:121155843-121161266
Accession: 100552525
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000015455	zf-U1	PF06220.12	8.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000015769	SNRPC-201	545	XM_003220340	ENSACAP00000015455	180 (aa)	XP_003220388	G1KRH5

Gene Model

Click here to download ENSACAG00000015721's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000015721's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000015721	SNRPC	99	89.385	ENSG00000124562	SNRPC	100	96.610	Homo_sapiens
ENSACAG00000015721	SNRPC	94	91.765	ENSAMEG00000000963	SNRPC	94	91.228	Ailuropoda_melanoleuca
ENSACAG00000015721	SNRPC	87	84.076	ENSANAG00000021026	-	100	76.101	Aotus_nancymaae
ENSACAG00000015721	SNRPC	87	85.987	ENSANAG00000019726	-	93	85.000	Aotus_nancymaae
ENSACAG00000015721	SNRPC	87	72.611	ENSANAG00000021444	-	61	77.083	Aotus_nancymaae
ENSACAG00000015721	SNRPC	87	89.809	ENSANAG00000020588	-	91	90.385	Aotus_nancymaae
ENSACAG00000015721	SNRPC	87	92.357	ENSANAG00000019157	-	100	91.195	Aotus_nancymaae
ENSACAG00000015721	SNRPC	99	88.268	ENSANAG00000019696	-	99	96.815	Aotus_nancymaae
ENSACAG00000015721	SNRPC	87	96.178	ENSANAG00000007843	-	99	96.178	Aotus_nancymaae
ENSACAG00000015721	SNRPC	87	85.987	ENSAMXG00000032641	snrpc	87	84.906	Astyanax_mexicanus
ENSACAG00000015721	SNRPC	87	96.815	ENSBTAG00000024549	SNRPC	99	96.815	Bos_taurus
ENSACAG00000015721	SNRPC	87	95.541	ENSCJAG00000043055	-	100	94.340	Callithrix_jacchus
ENSACAG00000015721	SNRPC	99	88.268	ENSCJAG00000015321	-	99	96.815	Callithrix_jacchus
ENSACAG00000015721	SNRPC	87	94.268	ENSCJAG00000041822	-	100	93.082	Callithrix_jacchus
ENSACAG00000015721	SNRPC	87	92.357	ENSCAFG00000031775	-	100	91.195	Canis_familiaris
ENSACAG00000015721	SNRPC	64	96.552	ENSCAFG00000001231	-	91	96.552	Canis_familiaris
ENSACAG00000015721	SNRPC	87	76.433	ENSCAFG00000025525	-	100	75.472	Canis_familiaris
ENSACAG00000015721	SNRPC	87	86.076	ENSCAFG00000028988	-	100	85.625	Canis_familiaris
ENSACAG00000015721	SNRPC	88	93.082	ENSCAFG00020005758	-	100	93.082	Canis_lupus_dingo
ENSACAG00000015721	SNRPC	87	92.357	ENSCAFG00020017383	-	100	91.195	Canis_lupus_dingo
ENSACAG00000015721	SNRPC	90	82.716	ENSCAFG00020009944	-	93	82.716	Canis_lupus_dingo
ENSACAG00000015721	SNRPC	87	96.815	ENSCAFG00020005945	-	99	96.815	Canis_lupus_dingo
ENSACAG00000015721	SNRPC	87	76.136	ENSCAFG00020026577	-	100	81.461	Canis_lupus_dingo
ENSACAG00000015721	SNRPC	87	96.178	ENSCHIG00000012087	-	99	96.178	Capra_hircus
ENSACAG00000015721	SNRPC	87	80.255	ENSTSYG00000025721	-	100	69.811	Carlito_syrichta
ENSACAG00000015721	SNRPC	86	87.662	ENSTSYG00000029745	-	67	83.459	Carlito_syrichta
ENSACAG00000015721	SNRPC	87	96.815	ENSTSYG00000011216	-	99	96.815	Carlito_syrichta
ENSACAG00000015721	SNRPC	79	97.183	ENSCAPG00000005161	SNRPC	100	97.183	Cavia_aperea
ENSACAG00000015721	SNRPC	87	96.815	ENSCPOG00000008563	SNRPC	99	96.815	Cavia_porcellus
ENSACAG00000015721	SNRPC	87	77.564	ENSCCAG00000022209	-	95	77.564	Cebus_capucinus
ENSACAG00000015721	SNRPC	87	68.153	ENSCCAG00000028293	-	58	86.842	Cebus_capucinus
ENSACAG00000015721	SNRPC	96	84.393	ENSCCAG00000036059	-	97	84.393	Cebus_capucinus
ENSACAG00000015721	SNRPC	86	78.065	ENSCCAG00000026624	-	66	71.338	Cebus_capucinus
ENSACAG00000015721	SNRPC	88	88.050	ENSCCAG00000022751	-	97	88.050	Cebus_capucinus
ENSACAG00000015721	SNRPC	96	91.279	ENSCATG00000035787	SNRPC	99	96.815	Cercocebus_atys
ENSACAG00000015721	SNRPC	87	96.815	ENSCLAG00000016920	SNRPC	99	96.815	Chinchilla_lanigera
ENSACAG00000015721	SNRPC	89	77.640	ENSCLAG00000010242	-	77	79.365	Chinchilla_lanigera
ENSACAG00000015721	SNRPC	87	76.136	ENSCSAG00000009821	SNRPC	100	81.461	Chlorocebus_sabaeus
ENSACAG00000015721	SNRPC	88	81.761	ENSCHOG00000011439	SNRPC	91	80.368	Choloepus_hoffmanni
ENSACAG00000015721	SNRPC	87	96.178	ENSCPBG00000027142	SNRPC	99	96.178	Chrysemys_picta_bellii
ENSACAG00000015721	SNRPC	87	96.815	ENSCANG00000028035	SNRPC	99	96.815	Colobus_angolensis_palliatus
ENSACAG00000015721	SNRPC	87	84.076	ENSCGRG00001021483	-	100	81.132	Cricetulus_griseus_chok1gshd
ENSACAG00000015721	SNRPC	87	96.178	ENSCGRG00001009011	-	99	96.178	Cricetulus_griseus_chok1gshd
ENSACAG00000015721	SNRPC	88	96.226	ENSCGRG00000005005	Snrpc	100	96.226	Cricetulus_griseus_crigri
ENSACAG00000015721	SNRPC	89	94.375	ENSDNOG00000034699	-	100	94.375	Dasypus_novemcinctus
ENSACAG00000015721	SNRPC	65	95.726	ENSDNOG00000042403	-	93	95.726	Dasypus_novemcinctus
ENSACAG00000015721	SNRPC	88	79.874	ENSDORG00000005955	Snrpc	68	76.543	Dipodomys_ordii
ENSACAG00000015721	SNRPC	83	76.510	ENSDORG00000029823	-	55	90.789	Dipodomys_ordii
ENSACAG00000015721	SNRPC	86	94.156	ENSETEG00000008268	-	100	92.949	Echinops_telfairi
ENSACAG00000015721	SNRPC	86	88.961	ENSETEG00000011265	-	100	87.821	Echinops_telfairi
ENSACAG00000015721	SNRPC	87	96.815	ENSEASG00005021007	SNRPC	99	96.815	Equus_asinus_asinus
ENSACAG00000015721	SNRPC	87	96.815	ENSECAG00000026848	SNRPC	99	96.815	Equus_caballus
ENSACAG00000015721	SNRPC	87	79.618	ENSEEUG00000014633	SNRPC	90	79.618	Erinaceus_europaeus
ENSACAG00000015721	SNRPC	95	90.643	ENSFCAG00000044077	-	99	96.815	Felis_catus
ENSACAG00000015721	SNRPC	67	95.868	ENSFCAG00000031775	-	73	93.548	Felis_catus
ENSACAG00000015721	SNRPC	87	96.815	ENSFALG00000003756	SNRPC	99	96.815	Ficedula_albicollis
ENSACAG00000015721	SNRPC	87	96.815	ENSFDAG00000018111	SNRPC	99	96.815	Fukomys_damarensis
ENSACAG00000015721	SNRPC	87	96.203	ENSGALG00000002773	SNRPC	99	96.203	Gallus_gallus
ENSACAG00000015721	SNRPC	87	96.178	ENSGAGG00000003063	SNRPC	99	96.178	Gopherus_agassizii
ENSACAG00000015721	SNRPC	87	96.815	ENSGGOG00000012499	SNRPC	99	96.815	Gorilla_gorilla
ENSACAG00000015721	SNRPC	87	80.255	ENSHGLG00000017741	-	100	76.730	Heterocephalus_glaber_female
ENSACAG00000015721	SNRPC	87	97.436	ENSHGLG00000013981	SNRPC	99	97.436	Heterocephalus_glaber_female
ENSACAG00000015721	SNRPC	71	72.441	ENSHGLG00000005871	-	100	71.698	Heterocephalus_glaber_female
ENSACAG00000015721	SNRPC	87	80.255	ENSHGLG00100010786	-	100	76.730	Heterocephalus_glaber_male
ENSACAG00000015721	SNRPC	87	97.436	ENSHGLG00100009478	SNRPC	99	97.436	Heterocephalus_glaber_male
ENSACAG00000015721	SNRPC	87	91.720	ENSHGLG00100017764	-	100	90.566	Heterocephalus_glaber_male
ENSACAG00000015721	SNRPC	87	86.624	ENSIPUG00000024851	snrpc	100	85.535	Ictalurus_punctatus
ENSACAG00000015721	SNRPC	87	96.815	ENSSTOG00000013786	SNRPC	99	96.815	Ictidomys_tridecemlineatus
ENSACAG00000015721	SNRPC	87	96.178	ENSJJAG00000021741	Snrpc	99	96.178	Jaculus_jaculus
ENSACAG00000015721	SNRPC	89	88.889	ENSLACG00000013753	SNRPC	90	90.123	Latimeria_chalumnae
ENSACAG00000015721	SNRPC	87	96.815	ENSLAFG00000013534	SNRPC	99	96.815	Loxodonta_africana
ENSACAG00000015721	SNRPC	87	96.815	ENSMFAG00000031764	-	99	96.815	Macaca_fascicularis
ENSACAG00000015721	SNRPC	87	96.178	ENSMFAG00000030525	-	99	96.178	Macaca_fascicularis
ENSACAG00000015721	SNRPC	87	95.541	ENSMMUG00000039415	-	100	94.340	Macaca_mulatta
ENSACAG00000015721	SNRPC	89	95.625	ENSMMUG00000000869	-	98	95.625	Macaca_mulatta
ENSACAG00000015721	SNRPC	87	86.624	ENSMMUG00000045425	-	100	85.535	Macaca_mulatta
ENSACAG00000015721	SNRPC	99	88.827	ENSMNEG00000032731	SNRPC	99	96.815	Macaca_nemestrina
ENSACAG00000015721	SNRPC	99	88.889	ENSMLEG00000033916	-	99	96.815	Mandrillus_leucophaeus
ENSACAG00000015721	SNRPC	94	84.706	ENSMLEG00000040224	-	97	84.706	Mandrillus_leucophaeus
ENSACAG00000015721	SNRPC	87	96.178	ENSMGAG00000006054	SNRPC	99	96.178	Meleagris_gallopavo
ENSACAG00000015721	SNRPC	89	83.750	ENSMICG00000036552	-	89	78.125	Microcebus_murinus
ENSACAG00000015721	SNRPC	91	94.479	ENSMICG00000007339	-	99	96.178	Microcebus_murinus
ENSACAG00000015721	SNRPC	87	96.178	ENSMICG00000032183	-	99	96.178	Microcebus_murinus
ENSACAG00000015721	SNRPC	87	84.713	ENSMICG00000009130	-	100	84.277	Microcebus_murinus
ENSACAG00000015721	SNRPC	87	96.178	ENSMOCG00000017609	Snrpc	99	96.178	Microtus_ochrogaster
ENSACAG00000015721	SNRPC	87	98.089	ENSMODG00000013904	-	99	98.089	Monodelphis_domestica
ENSACAG00000015721	SNRPC	87	96.178	MGP_CAROLIEiJ_G0021308	Snrpc	99	96.178	Mus_caroli
ENSACAG00000015721	SNRPC	88	95.570	ENSMUSG00000024217	Snrpc	99	96.178	Mus_musculus
ENSACAG00000015721	SNRPC	52	94.681	MGP_SPRETEiJ_G0022221	-	80	92.708	Mus_spretus
ENSACAG00000015721	SNRPC	88	96.855	ENSMPUG00000003210	SNRPC	100	96.855	Mustela_putorius_furo
ENSACAG00000015721	SNRPC	88	96.855	ENSMLUG00000002488	SNRPC	100	96.855	Myotis_lucifugus
ENSACAG00000015721	SNRPC	87	96.178	ENSNGAG00000019686	Snrpc	99	96.178	Nannospalax_galili
ENSACAG00000015721	SNRPC	87	96.815	ENSNLEG00000034810	SNRPC	99	96.815	Nomascus_leucogenys
ENSACAG00000015721	SNRPC	79	97.887	ENSMEUG00000009300	SNRPC	100	97.887	Notamacropus_eugenii
ENSACAG00000015721	SNRPC	87	96.815	ENSODEG00000018985	-	99	96.815	Octodon_degus
ENSACAG00000015721	SNRPC	87	96.178	ENSODEG00000020201	-	99	96.178	Octodon_degus
ENSACAG00000015721	SNRPC	87	96.815	ENSODEG00000020370	-	99	96.815	Octodon_degus
ENSACAG00000015721	SNRPC	67	90.909	ENSODEG00000006008	-	88	89.431	Octodon_degus
ENSACAG00000015721	SNRPC	87	95.541	ENSODEG00000019633	-	100	94.340	Octodon_degus
ENSACAG00000015721	SNRPC	87	96.815	ENSODEG00000017080	-	99	96.815	Octodon_degus
ENSACAG00000015721	SNRPC	80	93.919	ENSOANG00000003405	SNRPC	100	93.919	Ornithorhynchus_anatinus
ENSACAG00000015721	SNRPC	87	96.815	ENSOCUG00000026668	-	99	96.815	Oryctolagus_cuniculus
ENSACAG00000015721	SNRPC	87	94.268	ENSOCUG00000023292	-	100	93.082	Oryctolagus_cuniculus
ENSACAG00000015721	SNRPC	87	95.541	ENSOCUG00000026430	-	99	93.750	Oryctolagus_cuniculus
ENSACAG00000015721	SNRPC	85	82.353	ENSOGAG00000028405	-	98	80.263	Otolemur_garnettii
ENSACAG00000015721	SNRPC	87	94.904	ENSOGAG00000026269	-	100	93.711	Otolemur_garnettii
ENSACAG00000015721	SNRPC	86	97.419	ENSOGAG00000008755	-	92	94.479	Otolemur_garnettii
ENSACAG00000015721	SNRPC	87	96.815	ENSOARG00000010823	SNRPC	99	96.815	Ovis_aries
ENSACAG00000015721	SNRPC	87	96.815	ENSPPAG00000043871	SNRPC	99	96.815	Pan_paniscus
ENSACAG00000015721	SNRPC	91	56.024	ENSPPRG00000016017	-	74	52.985	Panthera_pardus
ENSACAG00000015721	SNRPC	94	91.176	ENSPPRG00000008647	-	99	96.815	Panthera_pardus
ENSACAG00000015721	SNRPC	94	91.176	ENSPTIG00000021867	-	99	96.815	Panthera_tigris_altaica
ENSACAG00000015721	SNRPC	87	96.815	ENSPTRG00000018070	SNRPC	99	96.815	Pan_troglodytes
ENSACAG00000015721	SNRPC	94	80.588	ENSPANG00000018228	-	100	80.588	Papio_anubis
ENSACAG00000015721	SNRPC	96	91.279	ENSPANG00000022802	-	99	96.815	Papio_anubis
ENSACAG00000015721	SNRPC	51	84.783	ENSPKIG00000003136	snrpc	50	90.909	Paramormyrops_kingsleyae
ENSACAG00000015721	SNRPC	87	97.452	ENSPSIG00000004876	SNRPC	77	97.452	Pelodiscus_sinensis
ENSACAG00000015721	SNRPC	87	84.076	ENSPEMG00000002763	-	100	81.132	Peromyscus_maniculatus_bairdii
ENSACAG00000015721	SNRPC	87	96.178	ENSPEMG00000010773	Snrpc	99	96.178	Peromyscus_maniculatus_bairdii
ENSACAG00000015721	SNRPC	92	92.771	ENSPCAG00000016885	SNRPC	95	92.771	Procavia_capensis
ENSACAG00000015721	SNRPC	91	95.092	ENSPCOG00000004904	SNRPC	99	96.815	Propithecus_coquereli
ENSACAG00000015721	SNRPC	94	90.588	ENSPVAG00000015597	SNRPC	94	90.588	Pteropus_vampyrus
ENSACAG00000015721	SNRPC	87	96.178	ENSRNOG00000000493	Snrpc	99	96.178	Rattus_norvegicus
ENSACAG00000015721	SNRPC	87	96.178	ENSRBIG00000014819	-	99	96.178	Rhinopithecus_bieti
ENSACAG00000015721	SNRPC	87	96.178	ENSRBIG00000022998	-	99	96.178	Rhinopithecus_bieti
ENSACAG00000015721	SNRPC	99	88.827	ENSRBIG00000037567	-	99	96.815	Rhinopithecus_bieti
ENSACAG00000015721	SNRPC	87	96.815	ENSRROG00000041300	SNRPC	99	96.815	Rhinopithecus_roxellana
ENSACAG00000015721	SNRPC	82	81.081	ENSSBOG00000032361	-	76	78.862	Saimiri_boliviensis_boliviensis
ENSACAG00000015721	SNRPC	86	79.870	ENSSBOG00000023189	-	91	78.846	Saimiri_boliviensis_boliviensis
ENSACAG00000015721	SNRPC	87	96.815	ENSSBOG00000031528	-	99	96.815	Saimiri_boliviensis_boliviensis
ENSACAG00000015721	SNRPC	88	97.468	ENSSHAG00000000945	-	91	95.092	Sarcophilus_harrisii
ENSACAG00000015721	SNRPC	87	74.522	ENSSARG00000008970	SNRPC	92	72.727	Sorex_araneus
ENSACAG00000015721	SNRPC	87	98.089	ENSSPUG00000002502	SNRPC	99	98.089	Sphenodon_punctatus
ENSACAG00000015721	SNRPC	87	96.815	ENSSSCG00000001531	SNRPC	99	96.815	Sus_scrofa
ENSACAG00000015721	SNRPC	87	97.452	ENSTGUG00000001773	SNRPC	99	97.452	Taeniopygia_guttata
ENSACAG00000015721	SNRPC	86	88.961	ENSTBEG00000013022	-	100	87.821	Tupaia_belangeri
ENSACAG00000015721	SNRPC	86	70.130	ENSTBEG00000015356	-	68	85.417	Tupaia_belangeri
ENSACAG00000015721	SNRPC	89	96.875	ENSTTRG00000007827	SNRPC	90	95.092	Tursiops_truncatus
ENSACAG00000015721	SNRPC	65	95.726	ENSUAMG00000014125	SNRPC	79	95.726	Ursus_americanus
ENSACAG00000015721	SNRPC	87	86.364	ENSUMAG00000010869	SNRPC	99	86.364	Ursus_maritimus
ENSACAG00000015721	SNRPC	79	71.831	ENSVPAG00000003106	SNRPC	79	71.831	Vicugna_pacos
ENSACAG00000015721	SNRPC	87	95.541	ENSVVUG00000021947	-	100	94.340	Vulpes_vulpes
ENSACAG00000015721	SNRPC	86	92.208	ENSVVUG00000010467	-	88	91.772	Vulpes_vulpes
ENSACAG00000015721	SNRPC	87	89.809	ENSXETG00000024721	snrpc	100	88.679	Xenopus_tropicalis