EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000015753 (Gene tree)
Gene ID: 100567864
Gene Symbol: POLR1D
Alias: MGC9850|RPA16|RPA9|RPAC2|RPO1-3
Full Name: DNA-directed RNA polymerases I and III subunit RPAC2
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 4500 bases
Position: chrGL343202.1:1812536-1817035
Accession: 100567864
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000015479	RNA_pol_L_2	PF13656.6	3.2e-30	1	1
ENSACAP00000015479	RNA_pol_L	PF01193.24	2.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000015793	POLR1D-201	351	XM_008114663	ENSACAP00000015479	116 (aa)	XP_008112870	H9GMN1

Gene Model

Click here to download ENSACAG00000015753's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03020	RNA polymerase	KEGG
acs04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000015753's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000015753	POLR1D	58	38.806	ENSACAG00000000251	POLR2J	56	38.806

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000015753	POLR1D	96	65.766	ENSG00000186184	POLR1D	96	65.766	Homo_sapiens
ENSACAG00000015753	POLR1D	87	65.347	ENSAPOG00000021882	polr1d	93	66.667	Acanthochromis_polyacanthus
ENSACAG00000015753	POLR1D	96	66.667	ENSAMEG00000019095	POLR1D	89	66.667	Ailuropoda_melanoleuca
ENSACAG00000015753	POLR1D	96	66.071	ENSACIG00000013328	polr1d	97	66.071	Amphilophus_citrinellus
ENSACAG00000015753	POLR1D	96	65.766	ENSAOCG00000018500	polr1d	97	65.766	Amphiprion_ocellaris
ENSACAG00000015753	POLR1D	96	65.766	ENSAPEG00000009489	polr1d	97	65.766	Amphiprion_percula
ENSACAG00000015753	POLR1D	96	63.964	ENSATEG00000019322	polr1d	97	63.964	Anabas_testudineus
ENSACAG00000015753	POLR1D	96	65.766	ENSANAG00000024486	POLR1D	83	65.766	Aotus_nancymaae
ENSACAG00000015753	POLR1D	96	67.568	ENSACLG00000023805	polr1d	97	67.568	Astatotilapia_calliptera
ENSACAG00000015753	POLR1D	90	67.308	ENSAMXG00000036118	polr1d	90	67.308	Astyanax_mexicanus
ENSACAG00000015753	POLR1D	96	65.766	ENSBTAG00000033252	-	83	65.766	Bos_taurus
ENSACAG00000015753	POLR1D	96	65.766	ENSBTAG00000008642	POLR1D	83	65.766	Bos_taurus
ENSACAG00000015753	POLR1D	76	43.182	WBGene00010230	rpac-19	61	43.182	Caenorhabditis_elegans
ENSACAG00000015753	POLR1D	96	65.766	ENSCJAG00000044669	POLR1D	83	65.766	Callithrix_jacchus
ENSACAG00000015753	POLR1D	96	66.667	ENSCAFG00000006755	POLR1D	83	66.667	Canis_familiaris
ENSACAG00000015753	POLR1D	96	66.667	ENSCHIG00000021910	POLR1D	83	66.667	Capra_hircus
ENSACAG00000015753	POLR1D	96	67.568	ENSTSYG00000026817	-	83	67.568	Carlito_syrichta
ENSACAG00000015753	POLR1D	91	58.333	ENSTSYG00000034852	-	89	58.333	Carlito_syrichta
ENSACAG00000015753	POLR1D	56	63.077	ENSCAPG00000006058	-	66	63.077	Cavia_aperea
ENSACAG00000015753	POLR1D	57	62.121	ENSCPOG00000030450	-	67	62.121	Cavia_porcellus
ENSACAG00000015753	POLR1D	98	52.632	ENSCCAG00000020191	-	95	52.632	Cebus_capucinus
ENSACAG00000015753	POLR1D	96	65.766	ENSCCAG00000021349	-	83	65.766	Cebus_capucinus
ENSACAG00000015753	POLR1D	96	58.559	ENSCATG00000022900	-	83	58.559	Cercocebus_atys
ENSACAG00000015753	POLR1D	96	65.766	ENSCATG00000030710	-	83	65.766	Cercocebus_atys
ENSACAG00000015753	POLR1D	96	66.667	ENSCLAG00000017623	POLR1D	90	66.667	Chinchilla_lanigera
ENSACAG00000015753	POLR1D	88	71.569	ENSCPBG00000004719	POLR1D	99	71.569	Chrysemys_picta_bellii
ENSACAG00000015753	POLR1D	96	63.964	ENSCANG00000037694	-	83	63.964	Colobus_angolensis_palliatus
ENSACAG00000015753	POLR1D	96	65.766	ENSCANG00000028632	-	83	65.766	Colobus_angolensis_palliatus
ENSACAG00000015753	POLR1D	96	66.667	ENSCGRG00001021251	Polr1d	83	66.667	Cricetulus_griseus_chok1gshd
ENSACAG00000015753	POLR1D	96	66.667	ENSCGRG00000011639	Polr1d	83	66.667	Cricetulus_griseus_crigri
ENSACAG00000015753	POLR1D	93	64.815	ENSCSEG00000018268	polr1d	94	63.393	Cynoglossus_semilaevis
ENSACAG00000015753	POLR1D	96	68.468	ENSCVAG00000018527	polr1d	97	68.468	Cyprinodon_variegatus
ENSACAG00000015753	POLR1D	88	67.647	ENSDARG00000037570	polr1d	91	67.647	Danio_rerio
ENSACAG00000015753	POLR1D	91	66.038	ENSDNOG00000046247	-	79	66.038	Dasypus_novemcinctus
ENSACAG00000015753	POLR1D	91	66.981	ENSDNOG00000043676	-	80	66.981	Dasypus_novemcinctus
ENSACAG00000015753	POLR1D	96	67.568	ENSDORG00000029155	Polr1d	83	67.568	Dipodomys_ordii
ENSACAG00000015753	POLR1D	73	47.059	FBgn0086447	l(2)37Cg	80	47.059	Drosophila_melanogaster
ENSACAG00000015753	POLR1D	96	67.568	ENSETEG00000012797	POLR1D	90	67.568	Echinops_telfairi
ENSACAG00000015753	POLR1D	87	64.356	ENSEBUG00000011748	polr1d	69	64.356	Eptatretus_burgeri
ENSACAG00000015753	POLR1D	91	68.868	ENSEASG00005022487	POLR1D	82	68.868	Equus_asinus_asinus
ENSACAG00000015753	POLR1D	96	66.667	ENSEEUG00000013144	POLR1D	90	66.667	Erinaceus_europaeus
ENSACAG00000015753	POLR1D	88	67.647	ENSELUG00000005105	rpac2	89	67.647	Esox_lucius
ENSACAG00000015753	POLR1D	96	66.667	ENSFCAG00000030162	POLR1D	83	66.667	Felis_catus
ENSACAG00000015753	POLR1D	86	68.000	ENSFALG00000011463	POLR1D	99	68.000	Ficedula_albicollis
ENSACAG00000015753	POLR1D	96	64.865	ENSFDAG00000004463	POLR1D	83	64.865	Fukomys_damarensis
ENSACAG00000015753	POLR1D	97	69.643	ENSFHEG00000015410	polr1d	97	69.643	Fundulus_heteroclitus
ENSACAG00000015753	POLR1D	59	67.647	ENSGALG00000007470	POLR1D	67	67.647	Gallus_gallus
ENSACAG00000015753	POLR1D	96	66.667	ENSGAFG00000001693	polr1d	97	66.667	Gambusia_affinis
ENSACAG00000015753	POLR1D	91	67.925	ENSGACG00000018585	polr1d	90	67.925	Gasterosteus_aculeatus
ENSACAG00000015753	POLR1D	100	71.552	ENSGAGG00000008503	POLR1D	100	71.552	Gopherus_agassizii
ENSACAG00000015753	POLR1D	96	65.766	ENSGGOG00000004235	POLR1D	83	65.766	Gorilla_gorilla
ENSACAG00000015753	POLR1D	96	67.568	ENSHBUG00000002111	polr1d	97	67.568	Haplochromis_burtoni
ENSACAG00000015753	POLR1D	96	63.964	ENSHGLG00000003202	POLR1D	83	63.964	Heterocephalus_glaber_female
ENSACAG00000015753	POLR1D	96	63.964	ENSHGLG00100009393	POLR1D	83	63.964	Heterocephalus_glaber_male
ENSACAG00000015753	POLR1D	100	63.793	ENSHCOG00000003258	polr1d	100	63.793	Hippocampus_comes
ENSACAG00000015753	POLR1D	93	69.444	ENSIPUG00000014810	polr1d	94	69.444	Ictalurus_punctatus
ENSACAG00000015753	POLR1D	96	65.766	ENSSTOG00000013877	POLR1D	83	65.766	Ictidomys_tridecemlineatus
ENSACAG00000015753	POLR1D	96	52.252	ENSJJAG00000021667	-	65	52.252	Jaculus_jaculus
ENSACAG00000015753	POLR1D	100	64.655	ENSJJAG00000022671	-	94	64.655	Jaculus_jaculus
ENSACAG00000015753	POLR1D	97	66.071	ENSKMAG00000015256	polr1d	98	66.071	Kryptolebias_marmoratus
ENSACAG00000015753	POLR1D	96	65.766	ENSLBEG00000015919	polr1d	97	65.766	Labrus_bergylta
ENSACAG00000015753	POLR1D	93	67.593	ENSLACG00000006810	POLR1D	89	67.593	Latimeria_chalumnae
ENSACAG00000015753	POLR1D	59	78.261	ENSLOCG00000014976	polr1d	93	78.261	Lepisosteus_oculatus
ENSACAG00000015753	POLR1D	91	68.868	ENSLAFG00000032290	POLR1D	80	68.868	Loxodonta_africana
ENSACAG00000015753	POLR1D	96	65.766	ENSMFAG00000045264	POLR1D	86	65.766	Macaca_fascicularis
ENSACAG00000015753	POLR1D	98	57.018	ENSMMUG00000041570	-	95	57.018	Macaca_mulatta
ENSACAG00000015753	POLR1D	96	65.766	ENSMMUG00000020386	POLR1D	96	65.766	Macaca_mulatta
ENSACAG00000015753	POLR1D	96	65.766	ENSMNEG00000008630	-	83	65.766	Macaca_nemestrina
ENSACAG00000015753	POLR1D	98	57.018	ENSMNEG00000038120	-	95	57.018	Macaca_nemestrina
ENSACAG00000015753	POLR1D	96	57.658	ENSMLEG00000032251	-	83	57.658	Mandrillus_leucophaeus
ENSACAG00000015753	POLR1D	96	65.766	ENSMLEG00000041048	-	83	65.766	Mandrillus_leucophaeus
ENSACAG00000015753	POLR1D	91	64.762	ENSMAMG00000014834	polr1d	96	64.762	Mastacembelus_armatus
ENSACAG00000015753	POLR1D	85	70.707	ENSMZEG00005006638	polr1d	88	70.707	Maylandia_zebra
ENSACAG00000015753	POLR1D	79	71.739	ENSMGAG00000005322	POLR1D	84	71.739	Meleagris_gallopavo
ENSACAG00000015753	POLR1D	96	66.667	ENSMAUG00000001946	Polr1d	83	66.667	Mesocricetus_auratus
ENSACAG00000015753	POLR1D	100	53.448	ENSMICG00000007349	-	85	53.448	Microcebus_murinus
ENSACAG00000015753	POLR1D	96	65.766	ENSMICG00000016883	-	83	65.766	Microcebus_murinus
ENSACAG00000015753	POLR1D	96	65.766	ENSMOCG00000021288	Polr1d	83	65.766	Microtus_ochrogaster
ENSACAG00000015753	POLR1D	96	66.667	ENSMMOG00000009605	polr1d	97	66.667	Mola_mola
ENSACAG00000015753	POLR1D	97	70.536	ENSMODG00000023881	POLR1D	98	70.536	Monodelphis_domestica
ENSACAG00000015753	POLR1D	100	63.793	ENSMALG00000010652	polr1d	100	63.793	Monopterus_albus
ENSACAG00000015753	POLR1D	96	63.964	MGP_CAROLIEiJ_G0028034	Polr1d	83	63.964	Mus_caroli
ENSACAG00000015753	POLR1D	96	63.964	ENSMUSG00000029642	Polr1d	83	63.964	Mus_musculus
ENSACAG00000015753	POLR1D	91	66.038	MGP_PahariEiJ_G0024600	Polr1d	80	66.038	Mus_pahari
ENSACAG00000015753	POLR1D	96	63.063	MGP_SPRETEiJ_G0029032	Polr1d	83	63.063	Mus_spretus
ENSACAG00000015753	POLR1D	96	65.766	ENSMLUG00000027169	-	83	65.766	Myotis_lucifugus
ENSACAG00000015753	POLR1D	91	64.762	ENSMLUG00000004118	-	79	64.762	Myotis_lucifugus
ENSACAG00000015753	POLR1D	96	66.667	ENSNGAG00000006014	Polr1d	96	66.667	Nannospalax_galili
ENSACAG00000015753	POLR1D	96	67.568	ENSNBRG00000020327	polr1d	97	67.568	Neolamprologus_brichardi
ENSACAG00000015753	POLR1D	96	65.766	ENSNLEG00000000358	POLR1D	83	65.766	Nomascus_leucogenys
ENSACAG00000015753	POLR1D	96	66.667	ENSODEG00000005294	-	83	66.667	Octodon_degus
ENSACAG00000015753	POLR1D	98	57.018	ENSODEG00000014801	-	95	57.018	Octodon_degus
ENSACAG00000015753	POLR1D	92	74.766	ENSOANG00000008708	-	98	74.766	Ornithorhynchus_anatinus
ENSACAG00000015753	POLR1D	96	65.766	ENSOCUG00000015706	POLR1D	68	65.766	Oryctolagus_cuniculus
ENSACAG00000015753	POLR1D	93	67.593	ENSORLG00000010257	polr1d	95	67.593	Oryzias_latipes
ENSACAG00000015753	POLR1D	93	67.593	ENSORLG00020000533	polr1d	73	67.593	Oryzias_latipes_hni
ENSACAG00000015753	POLR1D	93	68.519	ENSORLG00015013267	polr1d	72	68.519	Oryzias_latipes_hsok
ENSACAG00000015753	POLR1D	93	68.519	ENSOMEG00000014912	polr1d	72	68.519	Oryzias_melastigma
ENSACAG00000015753	POLR1D	96	65.766	ENSOGAG00000014601	POLR1D	83	65.766	Otolemur_garnettii
ENSACAG00000015753	POLR1D	100	66.379	ENSOARG00000017005	POLR1D	87	66.379	Ovis_aries
ENSACAG00000015753	POLR1D	91	67.925	ENSPPAG00000028138	POLR1D	80	67.925	Pan_paniscus
ENSACAG00000015753	POLR1D	96	66.667	ENSPPRG00000003381	POLR1D	83	66.667	Panthera_pardus
ENSACAG00000015753	POLR1D	96	66.667	ENSPTIG00000018137	POLR1D	83	66.667	Panthera_tigris_altaica
ENSACAG00000015753	POLR1D	96	65.766	ENSPTRG00000005734	POLR1D	83	65.766	Pan_troglodytes
ENSACAG00000015753	POLR1D	96	65.766	ENSPANG00000020259	-	83	65.766	Papio_anubis
ENSACAG00000015753	POLR1D	98	54.167	ENSPANG00000035051	-	95	54.167	Papio_anubis
ENSACAG00000015753	POLR1D	84	68.367	ENSPKIG00000021891	polr1d	98	50.400	Paramormyrops_kingsleyae
ENSACAG00000015753	POLR1D	97	72.321	ENSPSIG00000011822	POLR1D	87	72.321	Pelodiscus_sinensis
ENSACAG00000015753	POLR1D	89	59.223	ENSPMGG00000012998	POLR1D	75	59.223	Periophthalmus_magnuspinnatus
ENSACAG00000015753	POLR1D	89	67.961	ENSPMGG00000010359	polr1d	90	67.961	Periophthalmus_magnuspinnatus
ENSACAG00000015753	POLR1D	96	65.766	ENSPEMG00000006336	-	85	65.766	Peromyscus_maniculatus_bairdii
ENSACAG00000015753	POLR1D	83	62.500	ENSPMAG00000004228	polr1d	81	62.500	Petromyzon_marinus
ENSACAG00000015753	POLR1D	97	70.536	ENSPCIG00000001673	POLR1D	98	70.536	Phascolarctos_cinereus
ENSACAG00000015753	POLR1D	96	66.667	ENSPFOG00000023343	polr1d	100	70.115	Poecilia_formosa
ENSACAG00000015753	POLR1D	96	66.667	ENSPLAG00000009675	polr1d	97	66.667	Poecilia_latipinna
ENSACAG00000015753	POLR1D	96	66.667	ENSPMEG00000004628	polr1d	97	66.667	Poecilia_mexicana
ENSACAG00000015753	POLR1D	96	66.667	ENSPREG00000022032	polr1d	97	66.667	Poecilia_reticulata
ENSACAG00000015753	POLR1D	96	64.865	ENSPCOG00000028175	POLR1D	83	64.865	Propithecus_coquereli
ENSACAG00000015753	POLR1D	96	67.568	ENSPNYG00000000107	polr1d	97	67.568	Pundamilia_nyererei
ENSACAG00000015753	POLR1D	94	66.055	ENSPNAG00000001512	polr1d	91	66.055	Pygocentrus_nattereri
ENSACAG00000015753	POLR1D	96	63.063	ENSRBIG00000000336	-	83	63.063	Rhinopithecus_bieti
ENSACAG00000015753	POLR1D	96	65.766	ENSRBIG00000036378	-	83	65.766	Rhinopithecus_bieti
ENSACAG00000015753	POLR1D	96	63.964	ENSRROG00000026751	-	83	63.964	Rhinopithecus_roxellana
ENSACAG00000015753	POLR1D	96	65.766	ENSRROG00000042232	-	83	65.766	Rhinopithecus_roxellana
ENSACAG00000015753	POLR1D	74	51.163	YNL113W	RPC19	68	50.000	Saccharomyces_cerevisiae
ENSACAG00000015753	POLR1D	82	64.211	ENSSBOG00000030146	-	70	64.211	Saimiri_boliviensis_boliviensis
ENSACAG00000015753	POLR1D	96	65.766	ENSSBOG00000028482	-	83	65.766	Saimiri_boliviensis_boliviensis
ENSACAG00000015753	POLR1D	92	71.028	ENSSHAG00000001190	POLR1D	83	71.028	Sarcophilus_harrisii
ENSACAG00000015753	POLR1D	100	68.966	ENSSFOG00015011375	polr1d	100	68.966	Scleropages_formosus
ENSACAG00000015753	POLR1D	96	63.964	ENSSMAG00000011861	polr1d	97	63.964	Scophthalmus_maximus
ENSACAG00000015753	POLR1D	96	63.964	ENSSDUG00000011930	polr1d	97	63.964	Seriola_dumerili
ENSACAG00000015753	POLR1D	88	64.706	ENSSLDG00000023871	polr1d	86	64.706	Seriola_lalandi_dorsalis
ENSACAG00000015753	POLR1D	91	68.868	ENSSARG00000007840	POLR1D	80	68.868	Sorex_araneus
ENSACAG00000015753	POLR1D	90	82.692	ENSSPUG00000005786	POLR1D	97	78.947	Sphenodon_punctatus
ENSACAG00000015753	POLR1D	96	64.865	ENSSPAG00000011764	polr1d	97	64.865	Stegastes_partitus
ENSACAG00000015753	POLR1D	91	66.981	ENSSSCG00000009310	POLR1D	80	66.981	Sus_scrofa
ENSACAG00000015753	POLR1D	83	69.792	ENSTGUG00000005450	POLR1D	100	69.792	Taeniopygia_guttata
ENSACAG00000015753	POLR1D	97	64.286	ENSTRUG00000019741	polr1d	98	64.286	Takifugu_rubripes
ENSACAG00000015753	POLR1D	96	65.766	ENSTBEG00000007006	POLR1D	90	65.766	Tupaia_belangeri
ENSACAG00000015753	POLR1D	96	66.667	ENSUAMG00000011413	POLR1D	83	66.667	Ursus_americanus
ENSACAG00000015753	POLR1D	96	66.667	ENSUMAG00000016968	POLR1D	87	66.667	Ursus_maritimus
ENSACAG00000015753	POLR1D	96	66.667	ENSVVUG00000009216	POLR1D	83	66.667	Vulpes_vulpes
ENSACAG00000015753	POLR1D	84	70.103	ENSXCOG00000011731	polr1d	75	70.103	Xiphophorus_couchianus
ENSACAG00000015753	POLR1D	84	71.134	ENSXMAG00000017538	polr1d	75	71.134	Xiphophorus_maculatus