EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000016083 (Gene tree)
Gene ID: 100562613
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 18751 bases
Position: chr4:20701662-20720412
Accession: 100562613
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000015848	POP1	PF06978.11	1.6e-35	1	2
ENSACAP00000015848	POP1	PF06978.11	1.6e-35	2	2
ENSACAP00000015848	POPLD	PF08170.12	1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000016165	POP1-201	3042	XM_003219504	ENSACAP00000015848	1013 (aa)	XP_003219552	G1KS58

Gene Model

Click here to download ENSACAG00000016083's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03008	Ribosome biogenesis in eukaryotes	KEGG
acs03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000016083's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000016083	POP1	100	56.625	ENSG00000104356	POP1	100	56.551	Homo_sapiens
ENSACAG00000016083	POP1	100	46.540	ENSAPOG00000008198	pop1	100	47.014	Acanthochromis_polyacanthus
ENSACAG00000016083	POP1	100	55.566	ENSAMEG00000000556	POP1	100	55.566	Ailuropoda_melanoleuca
ENSACAG00000016083	POP1	100	46.065	ENSACIG00000004169	POP1	93	48.243	Amphilophus_citrinellus
ENSACAG00000016083	POP1	100	46.825	ENSAOCG00000010991	pop1	100	47.109	Amphiprion_ocellaris
ENSACAG00000016083	POP1	100	44.057	ENSAPEG00000007607	pop1	95	47.599	Amphiprion_percula
ENSACAG00000016083	POP1	100	45.669	ENSATEG00000024814	POP1	99	46.330	Anabas_testudineus
ENSACAG00000016083	POP1	91	64.579	ENSAPLG00000014418	POP1	98	64.687	Anas_platyrhynchos
ENSACAG00000016083	POP1	87	60.526	ENSANAG00000026360	POP1	99	60.526	Aotus_nancymaae
ENSACAG00000016083	POP1	100	45.480	ENSACLG00000010951	pop1	100	45.760	Astatotilapia_calliptera
ENSACAG00000016083	POP1	100	44.885	ENSAMXG00000014483	POP1	92	46.928	Astyanax_mexicanus
ENSACAG00000016083	POP1	100	54.928	ENSBTAG00000012596	POP1	99	55.382	Bos_taurus
ENSACAG00000016083	POP1	100	56.286	ENSCJAG00000015567	POP1	99	56.176	Callithrix_jacchus
ENSACAG00000016083	POP1	100	56.323	ENSCAFG00000000469	POP1	100	56.420	Canis_familiaris
ENSACAG00000016083	POP1	100	56.214	ENSCAFG00020026765	POP1	100	56.214	Canis_lupus_dingo
ENSACAG00000016083	POP1	100	55.129	ENSCHIG00000017066	POP1	100	55.877	Capra_hircus
ENSACAG00000016083	POP1	100	55.652	ENSTSYG00000003097	POP1	100	56.004	Carlito_syrichta
ENSACAG00000016083	POP1	100	54.651	ENSCAPG00000007251	POP1	99	54.341	Cavia_aperea
ENSACAG00000016083	POP1	100	56.183	ENSCPOG00000002901	POP1	99	55.882	Cavia_porcellus
ENSACAG00000016083	POP1	100	56.268	ENSCCAG00000018939	POP1	99	56.062	Cebus_capucinus
ENSACAG00000016083	POP1	100	56.455	ENSCATG00000040916	POP1	100	56.455	Cercocebus_atys
ENSACAG00000016083	POP1	100	55.459	ENSCLAG00000007208	POP1	97	55.459	Chinchilla_lanigera
ENSACAG00000016083	POP1	90	58.999	ENSCSAG00000012340	POP1	99	59.203	Chlorocebus_sabaeus
ENSACAG00000016083	POP1	95	54.070	ENSCHOG00000011432	POP1	99	53.947	Choloepus_hoffmanni
ENSACAG00000016083	POP1	100	63.592	ENSCPBG00000006373	POP1	100	63.311	Chrysemys_picta_bellii
ENSACAG00000016083	POP1	100	56.647	ENSCANG00000001647	POP1	100	56.647	Colobus_angolensis_palliatus
ENSACAG00000016083	POP1	100	53.475	ENSCGRG00001017308	Pop1	99	53.131	Cricetulus_griseus_chok1gshd
ENSACAG00000016083	POP1	100	49.275	ENSCGRG00000010824	Pop1	99	49.265	Cricetulus_griseus_crigri
ENSACAG00000016083	POP1	100	45.019	ENSCSEG00000008737	POP1	99	45.048	Cynoglossus_semilaevis
ENSACAG00000016083	POP1	100	45.913	ENSCVAG00000022248	pop1	100	46.578	Cyprinodon_variegatus
ENSACAG00000016083	POP1	52	42.586	ENSDARG00000102087	pop1	87	47.907	Danio_rerio
ENSACAG00000016083	POP1	100	53.046	ENSDNOG00000019974	POP1	100	52.952	Dasypus_novemcinctus
ENSACAG00000016083	POP1	100	49.467	ENSDORG00000015384	Pop1	99	50.195	Dipodomys_ordii
ENSACAG00000016083	POP1	80	33.283	FBgn0026702	l(1)G0045	93	33.333	Drosophila_melanogaster
ENSACAG00000016083	POP1	88	52.705	ENSETEG00000007839	POP1	87	52.236	Echinops_telfairi
ENSACAG00000016083	POP1	100	56.951	ENSEASG00005003189	POP1	97	56.878	Equus_asinus_asinus
ENSACAG00000016083	POP1	100	56.923	ENSECAG00000024236	POP1	99	56.780	Equus_caballus
ENSACAG00000016083	POP1	52	75.904	ENSEEUG00000003050	-	55	75.904	Erinaceus_europaeus
ENSACAG00000016083	POP1	100	47.495	ENSELUG00000003526	pop1	99	47.661	Esox_lucius
ENSACAG00000016083	POP1	100	56.232	ENSFCAG00000002168	POP1	100	56.339	Felis_catus
ENSACAG00000016083	POP1	100	59.299	ENSFALG00000005711	POP1	99	59.467	Ficedula_albicollis
ENSACAG00000016083	POP1	100	55.950	ENSFDAG00000017068	POP1	99	55.566	Fukomys_damarensis
ENSACAG00000016083	POP1	100	46.161	ENSFHEG00000019518	pop1	100	46.540	Fundulus_heteroclitus
ENSACAG00000016083	POP1	100	43.863	ENSGMOG00000000659	POP1	95	46.331	Gadus_morhua
ENSACAG00000016083	POP1	100	46.525	ENSGAFG00000019770	POP1	100	46.332	Gambusia_affinis
ENSACAG00000016083	POP1	100	44.677	ENSGACG00000003499	pop1	100	44.677	Gasterosteus_aculeatus
ENSACAG00000016083	POP1	100	63.010	ENSGAGG00000011737	POP1	98	63.143	Gopherus_agassizii
ENSACAG00000016083	POP1	100	56.107	ENSGGOG00000003176	POP1	100	56.358	Gorilla_gorilla
ENSACAG00000016083	POP1	100	45.387	ENSHBUG00000021583	pop1	100	45.666	Haplochromis_burtoni
ENSACAG00000016083	POP1	100	54.889	ENSHGLG00000006029	POP1	100	55.169	Heterocephalus_glaber_female
ENSACAG00000016083	POP1	100	54.889	ENSHGLG00100016879	POP1	100	55.169	Heterocephalus_glaber_male
ENSACAG00000016083	POP1	90	48.120	ENSHCOG00000013888	pop1	96	48.120	Hippocampus_comes
ENSACAG00000016083	POP1	100	43.169	ENSIPUG00000018336	pop1	99	43.134	Ictalurus_punctatus
ENSACAG00000016083	POP1	100	57.940	ENSSTOG00000011455	POP1	97	57.940	Ictidomys_tridecemlineatus
ENSACAG00000016083	POP1	100	52.770	ENSJJAG00000013325	Pop1	99	52.813	Jaculus_jaculus
ENSACAG00000016083	POP1	100	45.081	ENSKMAG00000001346	POP1	100	45.081	Kryptolebias_marmoratus
ENSACAG00000016083	POP1	100	45.270	ENSLBEG00000024457	POP1	93	47.803	Labrus_bergylta
ENSACAG00000016083	POP1	91	55.290	ENSLACG00000012498	POP1	96	55.929	Latimeria_chalumnae
ENSACAG00000016083	POP1	100	47.469	ENSLOCG00000009817	POP1	99	47.459	Lepisosteus_oculatus
ENSACAG00000016083	POP1	100	56.154	ENSLAFG00000010770	POP1	100	56.883	Loxodonta_africana
ENSACAG00000016083	POP1	100	56.551	ENSMFAG00000000347	POP1	100	56.551	Macaca_fascicularis
ENSACAG00000016083	POP1	100	56.551	ENSMNEG00000036870	POP1	100	56.551	Macaca_nemestrina
ENSACAG00000016083	POP1	100	56.551	ENSMLEG00000034986	POP1	100	56.551	Mandrillus_leucophaeus
ENSACAG00000016083	POP1	100	46.750	ENSMAMG00000004040	pop1	100	46.750	Mastacembelus_armatus
ENSACAG00000016083	POP1	100	45.480	ENSMZEG00005025448	pop1	100	45.760	Maylandia_zebra
ENSACAG00000016083	POP1	100	58.055	ENSMGAG00000012167	POP1	100	58.206	Meleagris_gallopavo
ENSACAG00000016083	POP1	100	56.019	ENSMAUG00000017537	Pop1	100	56.074	Mesocricetus_auratus
ENSACAG00000016083	POP1	100	55.566	ENSMICG00000004361	POP1	99	55.816	Microcebus_murinus
ENSACAG00000016083	POP1	100	53.964	ENSMOCG00000006356	Pop1	100	54.396	Microtus_ochrogaster
ENSACAG00000016083	POP1	100	44.606	ENSMMOG00000018242	pop1	94	46.958	Mola_mola
ENSACAG00000016083	POP1	100	55.261	ENSMODG00000006561	POP1	100	54.928	Monodelphis_domestica
ENSACAG00000016083	POP1	100	45.798	ENSMALG00000012621	POP1	100	46.176	Monopterus_albus
ENSACAG00000016083	POP1	100	53.913	MGP_CAROLIEiJ_G0019726	Pop1	99	53.967	Mus_caroli
ENSACAG00000016083	POP1	100	54.388	ENSMUSG00000022325	Pop1	99	54.154	Mus_musculus
ENSACAG00000016083	POP1	100	54.023	MGP_PahariEiJ_G0019735	Pop1	99	54.138	Mus_pahari
ENSACAG00000016083	POP1	100	54.291	MGP_SPRETEiJ_G0020622	Pop1	99	54.057	Mus_spretus
ENSACAG00000016083	POP1	100	55.939	ENSMPUG00000015250	POP1	100	55.789	Mustela_putorius_furo
ENSACAG00000016083	POP1	100	53.876	ENSMLUG00000010204	POP1	100	53.876	Myotis_lucifugus
ENSACAG00000016083	POP1	100	55.416	ENSNGAG00000001582	Pop1	100	55.309	Nannospalax_galili
ENSACAG00000016083	POP1	100	44.146	ENSNBRG00000002356	pop1	94	46.752	Neolamprologus_brichardi
ENSACAG00000016083	POP1	100	56.069	ENSNLEG00000002541	POP1	100	56.069	Nomascus_leucogenys
ENSACAG00000016083	POP1	91	51.444	ENSMEUG00000003118	POP1	95	51.444	Notamacropus_eugenii
ENSACAG00000016083	POP1	100	54.280	ENSOPRG00000007667	POP1	100	54.280	Ochotona_princeps
ENSACAG00000016083	POP1	100	55.233	ENSODEG00000003984	POP1	100	55.034	Octodon_degus
ENSACAG00000016083	POP1	100	46.023	ENSONIG00000016445	pop1	100	46.023	Oreochromis_niloticus
ENSACAG00000016083	POP1	62	55.952	ENSOANG00000001278	-	94	55.952	Ornithorhynchus_anatinus
ENSACAG00000016083	POP1	100	54.990	ENSOCUG00000017400	POP1	100	54.894	Oryctolagus_cuniculus
ENSACAG00000016083	POP1	100	47.710	ENSORLG00000002839	pop1	99	47.674	Oryzias_latipes
ENSACAG00000016083	POP1	90	48.732	ENSORLG00020022450	POP1	96	49.363	Oryzias_latipes_hni
ENSACAG00000016083	POP1	100	47.182	ENSORLG00015012746	POP1	99	47.389	Oryzias_latipes_hsok
ENSACAG00000016083	POP1	100	47.241	ENSOMEG00000006915	pop1	98	47.890	Oryzias_melastigma
ENSACAG00000016083	POP1	100	55.587	ENSOGAG00000001466	POP1	99	55.685	Otolemur_garnettii
ENSACAG00000016083	POP1	100	56.455	ENSPPAG00000018410	POP1	100	56.455	Pan_paniscus
ENSACAG00000016083	POP1	100	56.867	ENSPPRG00000005002	POP1	99	56.770	Panthera_pardus
ENSACAG00000016083	POP1	100	56.438	ENSPTIG00000016527	POP1	99	56.631	Panthera_tigris_altaica
ENSACAG00000016083	POP1	100	56.543	ENSPTRG00000020458	POP1	100	56.543	Pan_troglodytes
ENSACAG00000016083	POP1	100	56.358	ENSPANG00000009704	POP1	100	56.358	Papio_anubis
ENSACAG00000016083	POP1	100	48.555	ENSPKIG00000016325	POP1	99	48.242	Paramormyrops_kingsleyae
ENSACAG00000016083	POP1	100	61.688	ENSPSIG00000012343	POP1	100	61.613	Pelodiscus_sinensis
ENSACAG00000016083	POP1	100	45.914	ENSPMGG00000022253	POP1	94	48.715	Periophthalmus_magnuspinnatus
ENSACAG00000016083	POP1	99	53.383	ENSPEMG00000023633	Pop1	99	53.378	Peromyscus_maniculatus_bairdii
ENSACAG00000016083	POP1	90	42.360	ENSPMAG00000003209	POP1	99	42.782	Petromyzon_marinus
ENSACAG00000016083	POP1	100	55.364	ENSPCIG00000012216	POP1	100	55.556	Phascolarctos_cinereus
ENSACAG00000016083	POP1	100	47.389	ENSPFOG00000012490	POP1	100	47.099	Poecilia_formosa
ENSACAG00000016083	POP1	100	47.217	ENSPLAG00000004646	POP1	100	47.104	Poecilia_latipinna
ENSACAG00000016083	POP1	100	47.104	ENSPMEG00000019592	POP1	100	47.099	Poecilia_mexicana
ENSACAG00000016083	POP1	100	47.093	ENSPREG00000020951	POP1	100	47.104	Poecilia_reticulata
ENSACAG00000016083	POP1	100	56.244	ENSPPYG00000018777	POP1	100	56.455	Pongo_abelii
ENSACAG00000016083	POP1	100	53.204	ENSPCAG00000016662	POP1	100	53.204	Procavia_capensis
ENSACAG00000016083	POP1	100	56.166	ENSPCOG00000019420	POP1	100	56.484	Propithecus_coquereli
ENSACAG00000016083	POP1	100	54.932	ENSPVAG00000014468	POP1	100	55.126	Pteropus_vampyrus
ENSACAG00000016083	POP1	89	46.674	ENSPNYG00000004476	pop1	94	46.752	Pundamilia_nyererei
ENSACAG00000016083	POP1	100	44.730	ENSPNAG00000000265	pop1	99	44.475	Pygocentrus_nattereri
ENSACAG00000016083	POP1	100	53.728	ENSRNOG00000005243	Pop1	100	54.075	Rattus_norvegicus
ENSACAG00000016083	POP1	100	56.744	ENSRBIG00000007996	POP1	100	56.744	Rhinopithecus_bieti
ENSACAG00000016083	POP1	100	56.530	ENSRROG00000012334	POP1	100	56.647	Rhinopithecus_roxellana
ENSACAG00000016083	POP1	99	56.683	ENSSBOG00000020830	POP1	99	56.696	Saimiri_boliviensis_boliviensis
ENSACAG00000016083	POP1	100	55.620	ENSSHAG00000000296	POP1	100	55.620	Sarcophilus_harrisii
ENSACAG00000016083	POP1	100	47.190	ENSSFOG00015007429	pop1	97	47.053	Scleropages_formosus
ENSACAG00000016083	POP1	92	48.968	ENSSMAG00000010467	POP1	95	48.291	Scophthalmus_maximus
ENSACAG00000016083	POP1	100	45.131	ENSSDUG00000007817	POP1	100	45.880	Seriola_dumerili
ENSACAG00000016083	POP1	100	45.037	ENSSLDG00000012565	POP1	100	45.880	Seriola_lalandi_dorsalis
ENSACAG00000016083	POP1	100	60.234	ENSSPUG00000003550	-	100	60.234	Sphenodon_punctatus
ENSACAG00000016083	POP1	90	49.132	ENSSPAG00000014955	pop1	94	49.189	Stegastes_partitus
ENSACAG00000016083	POP1	100	55.534	ENSSSCG00000006078	POP1	99	55.545	Sus_scrofa
ENSACAG00000016083	POP1	91	55.496	ENSTGUG00000012011	-	98	55.927	Taeniopygia_guttata
ENSACAG00000016083	POP1	100	45.789	ENSTRUG00000010856	pop1	93	48.073	Takifugu_rubripes
ENSACAG00000016083	POP1	91	47.202	ENSTNIG00000013297	pop1	96	47.655	Tetraodon_nigroviridis
ENSACAG00000016083	POP1	95	53.550	ENSTBEG00000014214	POP1	99	53.455	Tupaia_belangeri
ENSACAG00000016083	POP1	100	54.563	ENSTTRG00000016071	POP1	99	54.625	Tursiops_truncatus
ENSACAG00000016083	POP1	99	55.675	ENSUAMG00000017309	POP1	99	55.686	Ursus_americanus
ENSACAG00000016083	POP1	100	55.460	ENSUMAG00000016952	POP1	100	59.684	Ursus_maritimus
ENSACAG00000016083	POP1	82	60.286	ENSVPAG00000008278	POP1	82	60.286	Vicugna_pacos
ENSACAG00000016083	POP1	100	56.117	ENSVVUG00000010994	POP1	99	55.906	Vulpes_vulpes
ENSACAG00000016083	POP1	100	42.913	ENSXCOG00000017043	POP1	100	42.718	Xiphophorus_couchianus
ENSACAG00000016083	POP1	100	46.206	ENSXMAG00000002472	POP1	100	46.109	Xiphophorus_maculatus