EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000016195 (Gene tree)
Gene ID: 100568110
Gene Symbol: LSM14B
Alias: C20orf40|FAM61B|FLJ25473|FT005|LSM13|RAP55B|bA11M20.3
Full Name: LSM family member 14B
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 27302 bases
Position: chr4:150596932-150624233
Accession: 100568110
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000015920	FDF	PF09532.10	2.4e-24	1	1
ENSACAP00000015920	SM-ATX	PF14438.6	1.1e-08	1	1
ENSACAP00000015920	LSM14	PF12701.7	5.4e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000016238	LSM14B-201	1173	XM_008110154	ENSACAP00000015920	387 (aa)	XP_008108361	G1KSA2

Gene Model

Click here to download ENSACAG00000016195's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000016195's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000016195	LSM14B	91	48.565	ENSACAG00000022480	LSM14A	89	48.244

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000016195	LSM14B	99	81.299	ENSG00000149657	LSM14B	99	81.299	Homo_sapiens
ENSACAG00000016195	LSM14B	89	54.622	ENSAPOG00000001780	lsm14b	99	54.061	Acanthochromis_polyacanthus
ENSACAG00000016195	LSM14B	99	72.535	ENSAMEG00000013430	LSM14B	100	72.535	Ailuropoda_melanoleuca
ENSACAG00000016195	LSM14B	90	52.661	ENSACIG00000012266	lsm14b	100	50.498	Amphilophus_citrinellus
ENSACAG00000016195	LSM14B	62	43.145	ENSACIG00000003147	LSM14B	88	41.224	Amphilophus_citrinellus
ENSACAG00000016195	LSM14B	99	48.241	ENSAOCG00000006667	LSM14B	92	49.180	Amphiprion_ocellaris
ENSACAG00000016195	LSM14B	89	54.902	ENSAOCG00000012380	lsm14b	99	54.315	Amphiprion_ocellaris
ENSACAG00000016195	LSM14B	89	48.656	ENSAPEG00000023633	lsm14b	99	50.000	Amphiprion_percula
ENSACAG00000016195	LSM14B	68	43.729	ENSATEG00000015895	LSM14B	83	43.116	Anabas_testudineus
ENSACAG00000016195	LSM14B	89	53.371	ENSATEG00000016603	lsm14b	91	52.909	Anabas_testudineus
ENSACAG00000016195	LSM14B	91	75.318	ENSAPLG00000013203	LSM14B	100	75.318	Anas_platyrhynchos
ENSACAG00000016195	LSM14B	99	80.519	ENSANAG00000037915	LSM14B	99	80.519	Aotus_nancymaae
ENSACAG00000016195	LSM14B	99	50.758	ENSACLG00000019663	lsm14b	99	51.759	Astatotilapia_calliptera
ENSACAG00000016195	LSM14B	90	59.726	ENSAMXG00000002865	lsm14b	100	59.453	Astyanax_mexicanus
ENSACAG00000016195	LSM14B	99	74.528	ENSBTAG00000021558	LSM14B	99	74.528	Bos_taurus
ENSACAG00000016195	LSM14B	99	80.519	ENSCJAG00000014434	LSM14B	99	80.519	Callithrix_jacchus
ENSACAG00000016195	LSM14B	90	71.318	ENSCAFG00000012518	LSM14B	98	71.318	Canis_familiaris
ENSACAG00000016195	LSM14B	99	81.299	ENSCAFG00020022150	LSM14B	99	81.299	Canis_lupus_dingo
ENSACAG00000016195	LSM14B	99	60.052	ENSCHIG00000022681	-	100	60.052	Capra_hircus
ENSACAG00000016195	LSM14B	99	82.078	ENSCHIG00000010284	-	99	82.078	Capra_hircus
ENSACAG00000016195	LSM14B	89	80.290	ENSTSYG00000031914	LSM14B	89	80.290	Carlito_syrichta
ENSACAG00000016195	LSM14B	89	79.480	ENSCAPG00000013059	LSM14B	100	79.480	Cavia_aperea
ENSACAG00000016195	LSM14B	89	79.710	ENSCPOG00000038080	LSM14B	100	79.710	Cavia_porcellus
ENSACAG00000016195	LSM14B	91	57.584	ENSCCAG00000024900	-	79	66.667	Cebus_capucinus
ENSACAG00000016195	LSM14B	99	80.519	ENSCCAG00000021267	LSM14B	99	80.519	Cebus_capucinus
ENSACAG00000016195	LSM14B	99	81.039	ENSCATG00000036006	LSM14B	99	81.039	Cercocebus_atys
ENSACAG00000016195	LSM14B	89	79.420	ENSCLAG00000003186	LSM14B	100	79.420	Chinchilla_lanigera
ENSACAG00000016195	LSM14B	99	74.057	ENSCSAG00000015729	LSM14B	99	74.057	Chlorocebus_sabaeus
ENSACAG00000016195	LSM14B	99	77.882	ENSCPBG00000027065	LSM14B	100	77.882	Chrysemys_picta_bellii
ENSACAG00000016195	LSM14B	89	79.130	ENSCANG00000036986	LSM14B	100	79.130	Colobus_angolensis_palliatus
ENSACAG00000016195	LSM14B	99	81.818	ENSCGRG00001018399	Lsm14b	99	81.818	Cricetulus_griseus_chok1gshd
ENSACAG00000016195	LSM14B	61	66.304	ENSCGRG00000006111	-	92	66.304	Cricetulus_griseus_crigri
ENSACAG00000016195	LSM14B	64	67.073	ENSCGRG00000002484	-	100	64.228	Cricetulus_griseus_crigri
ENSACAG00000016195	LSM14B	90	51.657	ENSCSEG00000004722	lsm14b	99	51.005	Cynoglossus_semilaevis
ENSACAG00000016195	LSM14B	98	47.619	ENSCSEG00000020669	LSM14B	92	46.702	Cynoglossus_semilaevis
ENSACAG00000016195	LSM14B	66	36.154	ENSCVAG00000012433	-	88	34.156	Cyprinodon_variegatus
ENSACAG00000016195	LSM14B	91	56.906	ENSDARG00000025386	lsm14b	92	55.738	Danio_rerio
ENSACAG00000016195	LSM14B	70	65.584	ENSDNOG00000025246	LSM14B	100	65.584	Dasypus_novemcinctus
ENSACAG00000016195	LSM14B	90	79.023	ENSDORG00000016683	Lsm14b	88	79.023	Dipodomys_ordii
ENSACAG00000016195	LSM14B	58	73.661	ENSETEG00000011188	-	94	73.756	Echinops_telfairi
ENSACAG00000016195	LSM14B	93	68.524	ENSETEG00000001869	-	91	66.572	Echinops_telfairi
ENSACAG00000016195	LSM14B	70	68.401	ENSEASG00005023218	LSM14B	100	66.171	Equus_asinus_asinus
ENSACAG00000016195	LSM14B	99	81.299	ENSECAG00000010659	LSM14B	99	81.299	Equus_caballus
ENSACAG00000016195	LSM14B	74	66.319	ENSEEUG00000007331	LSM14B	100	66.319	Erinaceus_europaeus
ENSACAG00000016195	LSM14B	90	52.941	ENSELUG00000016299	LSM14B	92	50.398	Esox_lucius
ENSACAG00000016195	LSM14B	99	59.439	ENSELUG00000005780	lsm14b	92	60.833	Esox_lucius
ENSACAG00000016195	LSM14B	99	82.078	ENSFCAG00000003248	LSM14B	99	82.078	Felis_catus
ENSACAG00000016195	LSM14B	90	76.804	ENSFALG00000010618	LSM14B	100	76.804	Ficedula_albicollis
ENSACAG00000016195	LSM14B	89	78.261	ENSFDAG00000002214	LSM14B	100	78.261	Fukomys_damarensis
ENSACAG00000016195	LSM14B	91	50.275	ENSFHEG00000006237	lsm14b	91	50.549	Fundulus_heteroclitus
ENSACAG00000016195	LSM14B	78	42.262	ENSFHEG00000003362	LSM14B	82	43.605	Fundulus_heteroclitus
ENSACAG00000016195	LSM14B	99	52.196	ENSGMOG00000017115	lsm14b	98	51.151	Gadus_morhua
ENSACAG00000016195	LSM14B	99	84.615	ENSGALG00000005125	LSM14B	100	85.641	Gallus_gallus
ENSACAG00000016195	LSM14B	89	47.075	ENSGAFG00000020318	lsm14b	91	46.978	Gambusia_affinis
ENSACAG00000016195	LSM14B	67	41.923	ENSGAFG00000013723	LSM14B	87	39.662	Gambusia_affinis
ENSACAG00000016195	LSM14B	91	52.941	ENSGACG00000009973	lsm14b	92	52.661	Gasterosteus_aculeatus
ENSACAG00000016195	LSM14B	64	81.707	ENSGAGG00000004106	LSM14B	94	81.707	Gopherus_agassizii
ENSACAG00000016195	LSM14B	91	78.348	ENSGGOG00000005630	LSM14B	95	78.348	Gorilla_gorilla
ENSACAG00000016195	LSM14B	99	80.260	ENSHGLG00000015055	LSM14B	99	80.260	Heterocephalus_glaber_female
ENSACAG00000016195	LSM14B	89	76.232	ENSHGLG00100015273	LSM14B	100	76.232	Heterocephalus_glaber_male
ENSACAG00000016195	LSM14B	96	50.526	ENSHCOG00000018747	LSM14B	92	50.416	Hippocampus_comes
ENSACAG00000016195	LSM14B	60	42.553	ENSHCOG00000004867	lsm14b	86	42.917	Hippocampus_comes
ENSACAG00000016195	LSM14B	99	61.809	ENSIPUG00000014946	lsm14b	95	61.194	Ictalurus_punctatus
ENSACAG00000016195	LSM14B	89	79.420	ENSSTOG00000020482	LSM14B	100	79.420	Ictidomys_tridecemlineatus
ENSACAG00000016195	LSM14B	99	80.940	ENSJJAG00000012728	Lsm14b	99	80.940	Jaculus_jaculus
ENSACAG00000016195	LSM14B	89	51.374	ENSKMAG00000017524	lsm14b	92	51.220	Kryptolebias_marmoratus
ENSACAG00000016195	LSM14B	70	42.007	ENSLBEG00000007951	LSM14B	86	40.928	Labrus_bergylta
ENSACAG00000016195	LSM14B	99	67.290	ENSLACG00000003849	LSM14B	100	66.589	Latimeria_chalumnae
ENSACAG00000016195	LSM14B	99	62.250	ENSLOCG00000003746	lsm14b	100	61.750	Lepisosteus_oculatus
ENSACAG00000016195	LSM14B	90	78.223	ENSLAFG00000007492	LSM14B	100	78.223	Loxodonta_africana
ENSACAG00000016195	LSM14B	99	81.558	ENSMFAG00000041479	LSM14B	99	81.558	Macaca_fascicularis
ENSACAG00000016195	LSM14B	99	81.558	ENSMMUG00000014084	LSM14B	99	81.558	Macaca_mulatta
ENSACAG00000016195	LSM14B	99	81.558	ENSMNEG00000045573	LSM14B	99	81.558	Macaca_nemestrina
ENSACAG00000016195	LSM14B	89	79.130	ENSMLEG00000040895	LSM14B	100	79.130	Mandrillus_leucophaeus
ENSACAG00000016195	LSM14B	96	49.869	ENSMAMG00000024124	LSM14B	92	49.448	Mastacembelus_armatus
ENSACAG00000016195	LSM14B	89	51.685	ENSMAMG00000020539	lsm14b	91	52.078	Mastacembelus_armatus
ENSACAG00000016195	LSM14B	99	50.758	ENSMZEG00005000987	lsm14b	99	51.759	Maylandia_zebra
ENSACAG00000016195	LSM14B	91	48.518	ENSMZEG00005026001	LSM14B	94	49.189	Maylandia_zebra
ENSACAG00000016195	LSM14B	91	78.771	ENSMGAG00000005300	LSM14B	100	80.726	Meleagris_gallopavo
ENSACAG00000016195	LSM14B	99	80.779	ENSMAUG00000020700	Lsm14b	99	80.779	Mesocricetus_auratus
ENSACAG00000016195	LSM14B	99	81.818	ENSMICG00000014675	LSM14B	99	81.818	Microcebus_murinus
ENSACAG00000016195	LSM14B	99	81.299	ENSMOCG00000020600	Lsm14b	99	81.299	Microtus_ochrogaster
ENSACAG00000016195	LSM14B	62	55.311	ENSMOCG00000005119	-	93	55.720	Microtus_ochrogaster
ENSACAG00000016195	LSM14B	90	50.402	ENSMMOG00000020042	lsm14b	95	50.266	Mola_mola
ENSACAG00000016195	LSM14B	91	51.247	ENSMMOG00000017321	LSM14B	92	51.247	Mola_mola
ENSACAG00000016195	LSM14B	70	69.481	ENSMODG00000016690	LSM14B	100	69.481	Monodelphis_domestica
ENSACAG00000016195	LSM14B	92	52.022	ENSMALG00000022251	LSM14B	92	51.087	Monopterus_albus
ENSACAG00000016195	LSM14B	99	51.414	ENSMALG00000004783	lsm14b	92	48.485	Monopterus_albus
ENSACAG00000016195	LSM14B	99	81.818	MGP_CAROLIEiJ_G0024770	Lsm14b	99	81.818	Mus_caroli
ENSACAG00000016195	LSM14B	99	81.818	ENSMUSG00000039108	Lsm14b	99	81.818	Mus_musculus
ENSACAG00000016195	LSM14B	99	81.039	MGP_PahariEiJ_G0026214	Lsm14b	99	81.039	Mus_pahari
ENSACAG00000016195	LSM14B	99	81.818	MGP_SPRETEiJ_G0025693	Lsm14b	99	81.818	Mus_spretus
ENSACAG00000016195	LSM14B	95	67.980	ENSMPUG00000007584	LSM14B	100	67.241	Mustela_putorius_furo
ENSACAG00000016195	LSM14B	99	80.570	ENSMLUG00000000304	LSM14B	99	79.793	Myotis_lucifugus
ENSACAG00000016195	LSM14B	60	74.678	ENSNGAG00000016550	Lsm14b	100	74.678	Nannospalax_galili
ENSACAG00000016195	LSM14B	89	80.000	ENSNLEG00000015757	LSM14B	100	80.000	Nomascus_leucogenys
ENSACAG00000016195	LSM14B	76	92.806	ENSMEUG00000008267	-	75	92.806	Notamacropus_eugenii
ENSACAG00000016195	LSM14B	50	95.000	ENSOPRG00000000447	-	58	94.872	Ochotona_princeps
ENSACAG00000016195	LSM14B	99	81.299	ENSODEG00000004099	LSM14B	99	81.299	Octodon_degus
ENSACAG00000016195	LSM14B	99	51.515	ENSONIG00000020318	lsm14b	99	53.165	Oreochromis_niloticus
ENSACAG00000016195	LSM14B	72	77.303	ENSOANG00000003370	LSM14B	98	77.303	Ornithorhynchus_anatinus
ENSACAG00000016195	LSM14B	90	78.386	ENSOCUG00000006279	LSM14B	100	78.386	Oryctolagus_cuniculus
ENSACAG00000016195	LSM14B	99	52.417	ENSORLG00000013525	lsm14b	99	50.886	Oryzias_latipes
ENSACAG00000016195	LSM14B	93	46.917	ENSORLG00000028353	LSM14B	91	45.604	Oryzias_latipes
ENSACAG00000016195	LSM14B	99	52.417	ENSORLG00020020553	lsm14b	99	50.886	Oryzias_latipes_hni
ENSACAG00000016195	LSM14B	63	32.472	ENSORLG00020018191	-	85	33.074	Oryzias_latipes_hni
ENSACAG00000016195	LSM14B	93	46.381	ENSORLG00015013157	LSM14B	91	45.479	Oryzias_latipes_hsok
ENSACAG00000016195	LSM14B	99	52.417	ENSORLG00015016862	lsm14b	99	50.886	Oryzias_latipes_hsok
ENSACAG00000016195	LSM14B	65	35.600	ENSOMEG00000000171	-	85	33.333	Oryzias_melastigma
ENSACAG00000016195	LSM14B	99	51.908	ENSOMEG00000023917	lsm14b	99	50.380	Oryzias_melastigma
ENSACAG00000016195	LSM14B	99	75.000	ENSOGAG00000003915	LSM14B	99	75.000	Otolemur_garnettii
ENSACAG00000016195	LSM14B	91	70.918	ENSOARG00000014706	LSM14B	98	71.948	Ovis_aries
ENSACAG00000016195	LSM14B	91	78.348	ENSPPAG00000035799	LSM14B	95	78.348	Pan_paniscus
ENSACAG00000016195	LSM14B	99	82.078	ENSPPRG00000009197	LSM14B	99	82.078	Panthera_pardus
ENSACAG00000016195	LSM14B	61	68.776	ENSPTIG00000021518	LSM14B	92	66.304	Panthera_tigris_altaica
ENSACAG00000016195	LSM14B	99	81.299	ENSPTRG00000013696	LSM14B	99	81.299	Pan_troglodytes
ENSACAG00000016195	LSM14B	99	81.299	ENSPANG00000011747	LSM14B	99	81.299	Papio_anubis
ENSACAG00000016195	LSM14B	99	60.599	ENSPKIG00000003275	lsm14b	87	89.362	Paramormyrops_kingsleyae
ENSACAG00000016195	LSM14B	90	83.908	ENSPSIG00000014762	LSM14B	100	83.908	Pelodiscus_sinensis
ENSACAG00000016195	LSM14B	99	81.510	ENSPEMG00000017688	Lsm14b	100	81.510	Peromyscus_maniculatus_bairdii
ENSACAG00000016195	LSM14B	99	83.896	ENSPCIG00000013405	LSM14B	99	83.896	Phascolarctos_cinereus
ENSACAG00000016195	LSM14B	99	51.654	ENSPFOG00000005631	lsm14b	91	51.247	Poecilia_formosa
ENSACAG00000016195	LSM14B	90	46.814	ENSPLAG00000005793	LSM14B	92	47.684	Poecilia_latipinna
ENSACAG00000016195	LSM14B	99	51.399	ENSPLAG00000002449	lsm14b	91	50.970	Poecilia_latipinna
ENSACAG00000016195	LSM14B	90	45.833	ENSPMEG00000022953	LSM14B	92	47.500	Poecilia_mexicana
ENSACAG00000016195	LSM14B	99	50.891	ENSPMEG00000000745	lsm14b	91	50.416	Poecilia_mexicana
ENSACAG00000016195	LSM14B	62	38.672	ENSPREG00000007828	LSM14B	87	39.921	Poecilia_reticulata
ENSACAG00000016195	LSM14B	99	82.338	ENSPCOG00000013625	LSM14B	99	82.338	Propithecus_coquereli
ENSACAG00000016195	LSM14B	90	59.890	ENSPNAG00000012777	lsm14b	100	60.349	Pygocentrus_nattereri
ENSACAG00000016195	LSM14B	99	73.821	ENSRNOG00000054557	Lsm14b	99	73.821	Rattus_norvegicus
ENSACAG00000016195	LSM14B	89	78.613	ENSRBIG00000033461	LSM14B	99	78.613	Rhinopithecus_bieti
ENSACAG00000016195	LSM14B	91	79.545	ENSRROG00000042949	LSM14B	91	79.545	Rhinopithecus_roxellana
ENSACAG00000016195	LSM14B	89	77.971	ENSSBOG00000032820	LSM14B	100	77.971	Saimiri_boliviensis_boliviensis
ENSACAG00000016195	LSM14B	90	83.046	ENSSHAG00000015528	LSM14B	96	83.046	Sarcophilus_harrisii
ENSACAG00000016195	LSM14B	90	58.056	ENSSFOG00015004627	lsm14b	92	59.290	Scleropages_formosus
ENSACAG00000016195	LSM14B	90	52.486	ENSSMAG00000012725	lsm14b	99	51.122	Scophthalmus_maximus
ENSACAG00000016195	LSM14B	96	51.042	ENSSMAG00000000135	LSM14B	92	51.087	Scophthalmus_maximus
ENSACAG00000016195	LSM14B	92	52.846	ENSSDUG00000022770	LSM14B	92	53.151	Seriola_dumerili
ENSACAG00000016195	LSM14B	90	55.125	ENSSDUG00000020977	lsm14b	99	54.020	Seriola_dumerili
ENSACAG00000016195	LSM14B	62	41.221	ENSSLDG00000011354	-	89	44.015	Seriola_lalandi_dorsalis
ENSACAG00000016195	LSM14B	54	70.476	ENSSARG00000007749	-	100	70.476	Sorex_araneus
ENSACAG00000016195	LSM14B	99	78.824	ENSSPUG00000014360	LSM14B	96	83.673	Sphenodon_punctatus
ENSACAG00000016195	LSM14B	68	38.710	ENSSPAG00000018854	-	88	33.083	Stegastes_partitus
ENSACAG00000016195	LSM14B	99	55.181	ENSSPAG00000020915	lsm14b	99	52.672	Stegastes_partitus
ENSACAG00000016195	LSM14B	99	80.519	ENSSSCG00000026052	LSM14B	100	64.610	Sus_scrofa
ENSACAG00000016195	LSM14B	90	85.387	ENSTGUG00000007884	LSM14B	100	85.387	Taeniopygia_guttata
ENSACAG00000016195	LSM14B	92	49.731	ENSTRUG00000001529	LSM14B	92	49.322	Takifugu_rubripes
ENSACAG00000016195	LSM14B	99	52.551	ENSTRUG00000011354	lsm14b	99	51.145	Takifugu_rubripes
ENSACAG00000016195	LSM14B	91	51.491	ENSTNIG00000002445	lsm14b	91	51.374	Tetraodon_nigroviridis
ENSACAG00000016195	LSM14B	83	97.436	ENSTTRG00000011043	LSM14B	82	97.436	Tursiops_truncatus
ENSACAG00000016195	LSM14B	98	74.474	ENSUAMG00000025298	LSM14B	99	74.474	Ursus_americanus
ENSACAG00000016195	LSM14B	98	74.474	ENSUMAG00000000480	LSM14B	99	74.474	Ursus_maritimus
ENSACAG00000016195	LSM14B	90	78.736	ENSVVUG00000015920	LSM14B	98	78.736	Vulpes_vulpes
ENSACAG00000016195	LSM14B	85	75.758	ENSXETG00000001997	lsm14b	99	76.667	Xenopus_tropicalis
ENSACAG00000016195	LSM14B	89	49.157	ENSXMAG00000010013	lsm14b	91	49.030	Xiphophorus_maculatus