EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000016198 (Gene tree)
Gene ID: 100551793
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 123639 bases
Position: chr2:110769568-110893206
Accession: 100551793
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000015944	Ago_hook	PF10427.9	8.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000016262	TNRC6C-201	5841	XM_008104357	ENSACAP00000015944	1946 (aa)	-	G1KSB7

Gene Model

Click here to download ENSACAG00000016198's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000016198's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000016198	TNRC6C	80	45.794	ENSACAG00000007281	TNRC6B	82	43.478
ENSACAG00000016198	TNRC6C	96	36.377	ENSACAG00000011857	TNRC6A	92	37.684

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000016198	TNRC6C	98	86.778	ENSG00000078687	TNRC6C	100	89.474	Homo_sapiens
ENSACAG00000016198	TNRC6C	71	54.298	ENSAPOG00000019749	tnrc6c1	98	50.502	Acanthochromis_polyacanthus
ENSACAG00000016198	TNRC6C	92	86.022	ENSAMEG00000013756	TNRC6C	100	86.022	Ailuropoda_melanoleuca
ENSACAG00000016198	TNRC6C	92	48.657	ENSACIG00000008075	tnrc6c1	99	50.027	Amphilophus_citrinellus
ENSACAG00000016198	TNRC6C	69	66.012	ENSAOCG00000023968	tnrc6c1	99	50.826	Amphiprion_ocellaris
ENSACAG00000016198	TNRC6C	71	54.953	ENSAPEG00000009020	tnrc6c1	99	50.775	Amphiprion_percula
ENSACAG00000016198	TNRC6C	98	91.259	ENSAPLG00000005456	TNRC6C	100	91.169	Anas_platyrhynchos
ENSACAG00000016198	TNRC6C	98	86.406	ENSANAG00000021554	TNRC6C	99	86.352	Aotus_nancymaae
ENSACAG00000016198	TNRC6C	92	48.331	ENSACLG00000000424	tnrc6c1	99	49.392	Astatotilapia_calliptera
ENSACAG00000016198	TNRC6C	99	82.386	ENSBTAG00000018658	TNRC6C	100	84.268	Bos_taurus
ENSACAG00000016198	TNRC6C	98	86.302	ENSCJAG00000019431	TNRC6C	99	86.615	Callithrix_jacchus
ENSACAG00000016198	TNRC6C	98	86.492	ENSCAFG00000005224	TNRC6C	99	85.855	Canis_familiaris
ENSACAG00000016198	TNRC6C	98	85.826	ENSCAFG00020006661	TNRC6C	99	85.537	Canis_lupus_dingo
ENSACAG00000016198	TNRC6C	98	82.723	ENSCHIG00000026004	TNRC6C	100	84.411	Capra_hircus
ENSACAG00000016198	TNRC6C	88	87.782	ENSTSYG00000005403	TNRC6C	100	87.782	Carlito_syrichta
ENSACAG00000016198	TNRC6C	98	77.830	ENSCAPG00000007307	TNRC6C	99	77.617	Cavia_aperea
ENSACAG00000016198	TNRC6C	98	82.732	ENSCPOG00000000467	TNRC6C	100	83.680	Cavia_porcellus
ENSACAG00000016198	TNRC6C	98	86.510	ENSCCAG00000030524	TNRC6C	100	87.384	Cebus_capucinus
ENSACAG00000016198	TNRC6C	98	86.719	ENSCATG00000033135	TNRC6C	100	87.674	Cercocebus_atys
ENSACAG00000016198	TNRC6C	99	83.497	ENSCLAG00000011139	TNRC6C	99	83.894	Chinchilla_lanigera
ENSACAG00000016198	TNRC6C	98	86.977	ENSCSAG00000005167	TNRC6C	99	86.542	Chlorocebus_sabaeus
ENSACAG00000016198	TNRC6C	69	84.036	ENSCHOG00000000088	TNRC6C	75	84.802	Choloepus_hoffmanni
ENSACAG00000016198	TNRC6C	92	91.275	ENSCPBG00000027960	TNRC6C	100	91.405	Chrysemys_picta_bellii
ENSACAG00000016198	TNRC6C	98	86.250	ENSCANG00000041771	TNRC6C	100	87.500	Colobus_angolensis_palliatus
ENSACAG00000016198	TNRC6C	98	81.406	ENSCGRG00001022686	Tnrc6c	100	81.624	Cricetulus_griseus_chok1gshd
ENSACAG00000016198	TNRC6C	99	81.085	ENSCGRG00000018041	Tnrc6c	100	81.624	Cricetulus_griseus_crigri
ENSACAG00000016198	TNRC6C	95	47.003	ENSCSEG00000012744	tnrc6c1	98	47.794	Cynoglossus_semilaevis
ENSACAG00000016198	TNRC6C	98	51.699	ENSDARG00000076847	tnrc6c1	99	55.757	Danio_rerio
ENSACAG00000016198	TNRC6C	98	85.251	ENSDNOG00000003247	TNRC6C	99	84.576	Dasypus_novemcinctus
ENSACAG00000016198	TNRC6C	98	79.197	ENSDORG00000004558	Tnrc6c	100	80.000	Dipodomys_ordii
ENSACAG00000016198	TNRC6C	82	76.768	ENSETEG00000005527	TNRC6C	89	77.315	Echinops_telfairi
ENSACAG00000016198	TNRC6C	88	85.284	ENSEASG00005004799	TNRC6C	100	85.284	Equus_asinus_asinus
ENSACAG00000016198	TNRC6C	98	86.545	ENSECAG00000012486	TNRC6C	99	86.073	Equus_caballus
ENSACAG00000016198	TNRC6C	87	86.780	ENSEEUG00000010008	TNRC6C	96	86.780	Erinaceus_europaeus
ENSACAG00000016198	TNRC6C	98	83.750	ENSFCAG00000028358	TNRC6C	100	82.785	Felis_catus
ENSACAG00000016198	TNRC6C	88	91.007	ENSFALG00000000848	TNRC6C	100	90.894	Ficedula_albicollis
ENSACAG00000016198	TNRC6C	91	84.299	ENSFDAG00000010368	TNRC6C	100	84.918	Fukomys_damarensis
ENSACAG00000016198	TNRC6C	59	39.669	ENSFHEG00000002936	tnrc6c1	99	49.431	Fundulus_heteroclitus
ENSACAG00000016198	TNRC6C	92	92.973	ENSGALG00000001725	TNRC6C	99	93.252	Gallus_gallus
ENSACAG00000016198	TNRC6C	95	49.325	ENSGAFG00000019019	tnrc6c1	99	48.755	Gambusia_affinis
ENSACAG00000016198	TNRC6C	71	52.880	ENSGACG00000012320	tnrc6c1	99	47.826	Gasterosteus_aculeatus
ENSACAG00000016198	TNRC6C	92	93.236	ENSGAGG00000022043	TNRC6C	99	93.155	Gopherus_agassizii
ENSACAG00000016198	TNRC6C	98	85.997	ENSGGOG00000011304	TNRC6C	100	86.640	Gorilla_gorilla
ENSACAG00000016198	TNRC6C	96	46.577	ENSHBUG00000010846	tnrc6c1	99	49.655	Haplochromis_burtoni
ENSACAG00000016198	TNRC6C	98	83.734	ENSHGLG00000004809	TNRC6C	99	83.489	Heterocephalus_glaber_female
ENSACAG00000016198	TNRC6C	98	83.021	ENSHGLG00100012597	TNRC6C	99	82.990	Heterocephalus_glaber_male
ENSACAG00000016198	TNRC6C	99	51.450	ENSIPUG00000000818	tnrc6c1	98	52.828	Ictalurus_punctatus
ENSACAG00000016198	TNRC6C	98	83.654	ENSSTOG00000009101	TNRC6C	100	84.879	Ictidomys_tridecemlineatus
ENSACAG00000016198	TNRC6C	98	81.165	ENSJJAG00000017055	Tnrc6c	99	80.433	Jaculus_jaculus
ENSACAG00000016198	TNRC6C	91	49.781	ENSKMAG00000021023	tnrc6c1	97	50.907	Kryptolebias_marmoratus
ENSACAG00000016198	TNRC6C	86	81.132	ENSLACG00000015283	TNRC6C	96	81.334	Latimeria_chalumnae
ENSACAG00000016198	TNRC6C	99	56.049	ENSLOCG00000013377	tnrc6c1	99	56.719	Lepisosteus_oculatus
ENSACAG00000016198	TNRC6C	99	83.738	ENSLAFG00000011122	TNRC6C	99	84.431	Loxodonta_africana
ENSACAG00000016198	TNRC6C	98	86.823	ENSMFAG00000043943	TNRC6C	100	87.731	Macaca_fascicularis
ENSACAG00000016198	TNRC6C	99	86.505	ENSMMUG00000011924	TNRC6C	100	85.557	Macaca_mulatta
ENSACAG00000016198	TNRC6C	98	86.771	ENSMNEG00000030405	TNRC6C	99	86.979	Macaca_nemestrina
ENSACAG00000016198	TNRC6C	98	86.823	ENSMLEG00000033436	TNRC6C	100	87.731	Mandrillus_leucophaeus
ENSACAG00000016198	TNRC6C	91	54.700	ENSMAMG00000023613	tnrc6c1	97	52.826	Mastacembelus_armatus
ENSACAG00000016198	TNRC6C	96	48.018	ENSMZEG00005010920	tnrc6c1	99	49.392	Maylandia_zebra
ENSACAG00000016198	TNRC6C	98	85.075	ENSMGAG00000003906	TNRC6C	100	84.867	Meleagris_gallopavo
ENSACAG00000016198	TNRC6C	88	82.604	ENSMAUG00000021618	Tnrc6c	100	82.834	Mesocricetus_auratus
ENSACAG00000016198	TNRC6C	98	87.233	ENSMICG00000003952	TNRC6C	100	87.898	Microcebus_murinus
ENSACAG00000016198	TNRC6C	98	83.073	ENSMOCG00000015879	Tnrc6c	100	84.252	Microtus_ochrogaster
ENSACAG00000016198	TNRC6C	70	55.235	ENSMMOG00000005203	tnrc6c1	97	50.629	Mola_mola
ENSACAG00000016198	TNRC6C	98	85.692	ENSMODG00000001785	TNRC6C	99	84.501	Monodelphis_domestica
ENSACAG00000016198	TNRC6C	98	82.656	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	83.802	Mus_caroli
ENSACAG00000016198	TNRC6C	98	82.292	ENSMUSG00000025571	Tnrc6c	100	83.408	Mus_musculus
ENSACAG00000016198	TNRC6C	98	82.656	MGP_PahariEiJ_G0018593	Tnrc6c	100	83.746	Mus_pahari
ENSACAG00000016198	TNRC6C	98	82.396	MGP_SPRETEiJ_G0018309	Tnrc6c	100	83.521	Mus_spretus
ENSACAG00000016198	TNRC6C	99	83.523	ENSMPUG00000013348	TNRC6C	98	83.610	Mustela_putorius_furo
ENSACAG00000016198	TNRC6C	99	77.345	ENSMLUG00000014431	TNRC6C	98	77.527	Myotis_lucifugus
ENSACAG00000016198	TNRC6C	98	82.804	ENSNGAG00000012203	Tnrc6c	99	82.362	Nannospalax_galili
ENSACAG00000016198	TNRC6C	92	49.145	ENSNBRG00000005344	tnrc6c1	99	50.106	Neolamprologus_brichardi
ENSACAG00000016198	TNRC6C	98	84.672	ENSNLEG00000000047	TNRC6C	99	84.724	Nomascus_leucogenys
ENSACAG00000016198	TNRC6C	89	80.632	ENSMEUG00000005104	TNRC6C	100	80.402	Notamacropus_eugenii
ENSACAG00000016198	TNRC6C	88	84.655	ENSODEG00000012499	TNRC6C	100	85.235	Octodon_degus
ENSACAG00000016198	TNRC6C	83	49.881	ENSONIG00000002210	tnrc6c1	97	51.235	Oreochromis_niloticus
ENSACAG00000016198	TNRC6C	98	62.403	ENSOANG00000009758	-	100	62.719	Ornithorhynchus_anatinus
ENSACAG00000016198	TNRC6C	83	77.538	ENSOCUG00000006122	TNRC6C	96	77.761	Oryctolagus_cuniculus
ENSACAG00000016198	TNRC6C	92	46.847	ENSORLG00000009837	tnrc6c1	100	68.401	Oryzias_latipes
ENSACAG00000016198	TNRC6C	92	47.349	ENSORLG00020016510	tnrc6c1	99	48.265	Oryzias_latipes_hni
ENSACAG00000016198	TNRC6C	73	42.587	ENSORLG00015000171	tnrc6c1	97	43.685	Oryzias_latipes_hsok
ENSACAG00000016198	TNRC6C	92	48.262	ENSOMEG00000000357	tnrc6c1	99	49.146	Oryzias_melastigma
ENSACAG00000016198	TNRC6C	88	85.582	ENSOGAG00000007197	TNRC6C	100	85.929	Otolemur_garnettii
ENSACAG00000016198	TNRC6C	94	80.120	ENSOARG00000006041	TNRC6C	98	79.849	Ovis_aries
ENSACAG00000016198	TNRC6C	98	86.562	ENSPPAG00000027160	TNRC6C	100	87.384	Pan_paniscus
ENSACAG00000016198	TNRC6C	98	83.750	ENSPPRG00000018881	TNRC6C	100	82.785	Panthera_pardus
ENSACAG00000016198	TNRC6C	68	70.746	ENSPTIG00000008791	TNRC6C	70	70.654	Panthera_tigris_altaica
ENSACAG00000016198	TNRC6C	98	86.615	ENSPTRG00000009699	TNRC6C	100	87.384	Pan_troglodytes
ENSACAG00000016198	TNRC6C	98	86.823	ENSPANG00000019994	TNRC6C	99	87.031	Papio_anubis
ENSACAG00000016198	TNRC6C	85	52.450	ENSPKIG00000005428	tnrc6c1	100	51.634	Paramormyrops_kingsleyae
ENSACAG00000016198	TNRC6C	91	88.789	ENSPSIG00000018069	TNRC6C	100	89.014	Pelodiscus_sinensis
ENSACAG00000016198	TNRC6C	58	58.985	ENSPMGG00000022911	tnrc6c1	97	64.898	Periophthalmus_magnuspinnatus
ENSACAG00000016198	TNRC6C	98	82.500	ENSPEMG00000009785	Tnrc6c	99	82.066	Peromyscus_maniculatus_bairdii
ENSACAG00000016198	TNRC6C	50	85.010	ENSPCIG00000017421	-	99	84.805	Phascolarctos_cinereus
ENSACAG00000016198	TNRC6C	95	49.027	ENSPFOG00000012560	tnrc6c1	96	58.023	Poecilia_formosa
ENSACAG00000016198	TNRC6C	83	51.403	ENSPLAG00000021055	tnrc6c1	97	51.453	Poecilia_latipinna
ENSACAG00000016198	TNRC6C	99	86.505	ENSPPYG00000008679	TNRC6C	98	86.749	Pongo_abelii
ENSACAG00000016198	TNRC6C	82	88.106	ENSPCAG00000012510	TNRC6C	91	88.462	Procavia_capensis
ENSACAG00000016198	TNRC6C	88	88.021	ENSPCOG00000021451	TNRC6C	100	88.079	Propithecus_coquereli
ENSACAG00000016198	TNRC6C	87	87.288	ENSPVAG00000002008	TNRC6C	95	87.288	Pteropus_vampyrus
ENSACAG00000016198	TNRC6C	92	47.983	ENSPNYG00000014477	tnrc6c1	99	49.048	Pundamilia_nyererei
ENSACAG00000016198	TNRC6C	88	82.717	ENSRNOG00000022395	Tnrc6c	100	83.064	Rattus_norvegicus
ENSACAG00000016198	TNRC6C	98	86.823	ENSRBIG00000027777	TNRC6C	100	87.731	Rhinopithecus_bieti
ENSACAG00000016198	TNRC6C	98	86.875	ENSRROG00000042912	TNRC6C	100	87.789	Rhinopithecus_roxellana
ENSACAG00000016198	TNRC6C	98	86.302	ENSSBOG00000023981	TNRC6C	100	87.153	Saimiri_boliviensis_boliviensis
ENSACAG00000016198	TNRC6C	70	57.476	ENSSFOG00015004735	-	99	61.443	Scleropages_formosus
ENSACAG00000016198	TNRC6C	92	47.557	ENSSMAG00000012761	tnrc6c1	99	50.340	Scophthalmus_maximus
ENSACAG00000016198	TNRC6C	92	49.493	ENSSDUG00000002366	tnrc6c1	98	50.640	Seriola_dumerili
ENSACAG00000016198	TNRC6C	83	49.913	ENSSLDG00000025613	tnrc6c1	97	50.448	Seriola_lalandi_dorsalis
ENSACAG00000016198	TNRC6C	83	89.916	ENSSARG00000006816	TNRC6C	91	89.916	Sorex_araneus
ENSACAG00000016198	TNRC6C	79	94.444	ENSSPUG00000007341	TNRC6C	98	94.444	Sphenodon_punctatus
ENSACAG00000016198	TNRC6C	69	54.408	ENSSPAG00000014977	tnrc6c1	97	50.208	Stegastes_partitus
ENSACAG00000016198	TNRC6C	85	87.486	ENSSSCG00000034373	TNRC6C	100	88.618	Sus_scrofa
ENSACAG00000016198	TNRC6C	91	90.597	ENSTGUG00000007733	TNRC6C	100	90.991	Taeniopygia_guttata
ENSACAG00000016198	TNRC6C	70	55.807	ENSTRUG00000011685	tnrc6c1	97	51.694	Takifugu_rubripes
ENSACAG00000016198	TNRC6C	87	53.597	ENSTNIG00000005273	tnrc6c1	100	62.672	Tetraodon_nigroviridis
ENSACAG00000016198	TNRC6C	57	78.087	ENSTBEG00000005046	TNRC6C	95	78.571	Tupaia_belangeri
ENSACAG00000016198	TNRC6C	91	84.888	ENSTTRG00000010828	TNRC6C	99	84.831	Tursiops_truncatus
ENSACAG00000016198	TNRC6C	98	84.419	ENSUMAG00000013614	TNRC6C	99	84.367	Ursus_maritimus
ENSACAG00000016198	TNRC6C	88	85.284	ENSVVUG00000015268	TNRC6C	100	85.284	Vulpes_vulpes
ENSACAG00000016198	TNRC6C	88	74.842	ENSXETG00000019470	tnrc6c	100	74.612	Xenopus_tropicalis
ENSACAG00000016198	TNRC6C	95	49.172	ENSXMAG00000025971	tnrc6c1	99	49.948	Xiphophorus_maculatus