EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000016238 (Gene tree)
Gene ID: 100554116
Gene Symbol: RBM38
Alias: HSRNASEB|RNPC1|SEB4D|dJ800J21.2|seb4B
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 34671 bases
Position: chrGL343217.1:1133163-1167833
Accession: 100554116
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000015952	RRM_1	PF00076.22	4.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000016270	RBM38-201	720	XM_008115236	ENSACAP00000015952	239 (aa)	XP_008113443	H9GN09

Gene Model

Click here to download ENSACAG00000016238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000016238's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000016238	RBM38	90	64.224	ENSACAG00000003962	RBM24	100	70.513

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000016238	RBM38	90	77.727	ENSG00000132819	RBM38	94	89.655	Homo_sapiens
ENSACAG00000016238	RBM38	90	68.326	ENSAPOG00000009939	-	94	69.369	Acanthochromis_polyacanthus
ENSACAG00000016238	RBM38	90	58.228	ENSAPOG00000003301	rbm38	93	58.228	Acanthochromis_polyacanthus
ENSACAG00000016238	RBM38	90	55.882	ENSACIG00000000010	rbm38	93	55.882	Amphilophus_citrinellus
ENSACAG00000016238	RBM38	95	66.094	ENSACIG00000012502	-	100	84.615	Amphilophus_citrinellus
ENSACAG00000016238	RBM38	90	58.650	ENSAOCG00000013497	-	93	58.650	Amphiprion_ocellaris
ENSACAG00000016238	RBM38	97	62.447	ENSAOCG00000012559	RBM38	94	66.960	Amphiprion_ocellaris
ENSACAG00000016238	RBM38	99	57.317	ENSAPEG00000013137	rbm38	93	58.650	Amphiprion_percula
ENSACAG00000016238	RBM38	90	63.248	ENSAPEG00000023581	-	95	66.809	Amphiprion_percula
ENSACAG00000016238	RBM38	90	64.979	ENSATEG00000016710	-	95	67.660	Anabas_testudineus
ENSACAG00000016238	RBM38	97	55.833	ENSATEG00000016366	rbm38	92	58.716	Anabas_testudineus
ENSACAG00000016238	RBM38	90	78.082	ENSANAG00000031959	RBM38	100	78.082	Aotus_nancymaae
ENSACAG00000016238	RBM38	90	67.521	ENSACLG00000019514	-	95	68.511	Astatotilapia_calliptera
ENSACAG00000016238	RBM38	72	69.540	ENSAMXG00000038120	rbm38	72	69.540	Astyanax_mexicanus
ENSACAG00000016238	RBM38	95	62.249	ENSAMXG00000015601	-	95	67.249	Astyanax_mexicanus
ENSACAG00000016238	RBM38	97	73.729	ENSBTAG00000008105	RBM38	91	77.273	Bos_taurus
ENSACAG00000016238	RBM38	97	75.424	ENSCJAG00000019139	RBM38	82	91.919	Callithrix_jacchus
ENSACAG00000016238	RBM38	97	75.424	ENSCAFG00020021943	RBM38	91	79.091	Canis_lupus_dingo
ENSACAG00000016238	RBM38	97	74.153	ENSCHIG00000002609	RBM38	91	77.727	Capra_hircus
ENSACAG00000016238	RBM38	97	75.000	ENSCPOG00000012781	RBM38	91	78.636	Cavia_porcellus
ENSACAG00000016238	RBM38	97	75.424	ENSCCAG00000036872	RBM38	82	91.919	Cebus_capucinus
ENSACAG00000016238	RBM38	97	74.153	ENSCATG00000032133	RBM38	82	91.919	Cercocebus_atys
ENSACAG00000016238	RBM38	97	74.468	ENSCLAG00000005906	RBM38	94	77.727	Chinchilla_lanigera
ENSACAG00000016238	RBM38	97	74.153	ENSCSAG00000015503	RBM38	91	77.727	Chlorocebus_sabaeus
ENSACAG00000016238	RBM38	90	87.500	ENSCPBG00000024059	RBM38	100	87.500	Chrysemys_picta_bellii
ENSACAG00000016238	RBM38	60	62.500	ENSCING00000025102	-	70	60.241	Ciona_intestinalis
ENSACAG00000016238	RBM38	62	63.226	ENSCSAVG00000001132	-	61	62.195	Ciona_savignyi
ENSACAG00000016238	RBM38	90	57.078	ENSCANG00000030105	-	79	57.078	Colobus_angolensis_palliatus
ENSACAG00000016238	RBM38	97	73.418	ENSCGRG00001012928	Rbm38	92	77.273	Cricetulus_griseus_chok1gshd
ENSACAG00000016238	RBM38	88	67.742	ENSCSEG00000004701	-	95	67.382	Cynoglossus_semilaevis
ENSACAG00000016238	RBM38	60	66.667	ENSCSEG00000020943	rbm38	59	59.890	Cynoglossus_semilaevis
ENSACAG00000016238	RBM38	89	65.801	ENSCVAG00000005472	-	93	65.957	Cyprinodon_variegatus
ENSACAG00000016238	RBM38	88	55.603	ENSCVAG00000015952	rbm38	91	57.082	Cyprinodon_variegatus
ENSACAG00000016238	RBM38	90	63.717	ENSDARG00000058818	rbm38	94	63.717	Danio_rerio
ENSACAG00000016238	RBM38	90	76.498	ENSDNOG00000032004	RBM38	100	76.498	Dasypus_novemcinctus
ENSACAG00000016238	RBM38	97	73.729	ENSECAG00000007700	RBM38	91	77.273	Equus_caballus
ENSACAG00000016238	RBM38	90	75.113	ENSEEUG00000013489	RBM38	91	76.471	Erinaceus_europaeus
ENSACAG00000016238	RBM38	89	66.094	ENSELUG00000005849	-	93	66.094	Esox_lucius
ENSACAG00000016238	RBM38	82	62.500	ENSELUG00000000585	-	87	62.500	Esox_lucius
ENSACAG00000016238	RBM38	97	74.153	ENSFCAG00000042916	RBM38	82	90.909	Felis_catus
ENSACAG00000016238	RBM38	72	86.047	ENSFALG00000010805	RBM38	98	78.462	Ficedula_albicollis
ENSACAG00000016238	RBM38	89	70.642	ENSFHEG00000006160	-	92	70.642	Fundulus_heteroclitus
ENSACAG00000016238	RBM38	88	57.082	ENSFHEG00000017748	rbm38	91	57.082	Fundulus_heteroclitus
ENSACAG00000016238	RBM38	75	71.196	ENSGMOG00000016655	-	98	74.595	Gadus_morhua
ENSACAG00000016238	RBM38	90	84.259	ENSGALG00000026081	RBM38	100	84.259	Gallus_gallus
ENSACAG00000016238	RBM38	90	66.667	ENSGACG00000009873	-	100	67.265	Gasterosteus_aculeatus
ENSACAG00000016238	RBM38	90	60.909	ENSGACG00000015224	rbm38	100	61.468	Gasterosteus_aculeatus
ENSACAG00000016238	RBM38	90	86.574	ENSGAGG00000001187	RBM38	100	86.574	Gopherus_agassizii
ENSACAG00000016238	RBM38	93	57.391	ENSHBUG00000012058	rbm38	92	58.296	Haplochromis_burtoni
ENSACAG00000016238	RBM38	95	64.876	ENSHBUG00000011778	-	95	68.511	Haplochromis_burtoni
ENSACAG00000016238	RBM38	98	72.385	ENSHGLG00000015077	RBM38	91	78.995	Heterocephalus_glaber_female
ENSACAG00000016238	RBM38	84	66.981	ENSHCOG00000005622	-	54	73.158	Hippocampus_comes
ENSACAG00000016238	RBM38	54	71.318	ENSHCOG00000019040	rbm38	55	71.318	Hippocampus_comes
ENSACAG00000016238	RBM38	95	64.198	ENSIPUG00000019349	-	95	65.517	Ictalurus_punctatus
ENSACAG00000016238	RBM38	88	52.137	ENSKMAG00000012402	rbm38	98	52.137	Kryptolebias_marmoratus
ENSACAG00000016238	RBM38	90	56.723	ENSLBEG00000018878	rbm38	93	56.723	Labrus_bergylta
ENSACAG00000016238	RBM38	95	64.831	ENSLBEG00000016163	RBM38	94	69.333	Labrus_bergylta
ENSACAG00000016238	RBM38	95	68.220	ENSLOCG00000003456	rbm38	95	70.222	Lepisosteus_oculatus
ENSACAG00000016238	RBM38	97	74.153	ENSMFAG00000043808	RBM38	82	91.919	Macaca_fascicularis
ENSACAG00000016238	RBM38	97	74.153	ENSMMUG00000031391	RBM38	82	91.919	Macaca_mulatta
ENSACAG00000016238	RBM38	97	74.153	ENSMNEG00000034683	RBM38	82	91.919	Macaca_nemestrina
ENSACAG00000016238	RBM38	90	64.807	ENSMAMG00000020499	RBM38	95	67.521	Mastacembelus_armatus
ENSACAG00000016238	RBM38	90	57.563	ENSMAMG00000024135	rbm38	93	57.563	Mastacembelus_armatus
ENSACAG00000016238	RBM38	95	64.876	ENSMZEG00005000849	-	95	68.511	Maylandia_zebra
ENSACAG00000016238	RBM38	90	55.462	ENSMZEG00005026036	rbm38	93	55.462	Maylandia_zebra
ENSACAG00000016238	RBM38	97	72.996	ENSMAUG00000021211	Rbm38	92	76.818	Mesocricetus_auratus
ENSACAG00000016238	RBM38	90	78.539	ENSMICG00000038011	RBM38	100	78.539	Microcebus_murinus
ENSACAG00000016238	RBM38	95	74.348	ENSMOCG00000008715	Rbm38	92	77.273	Microtus_ochrogaster
ENSACAG00000016238	RBM38	90	68.326	ENSMMOG00000020051	-	95	67.660	Mola_mola
ENSACAG00000016238	RBM38	90	83.333	ENSMODG00000016458	RBM38	92	83.333	Monodelphis_domestica
ENSACAG00000016238	RBM38	96	53.814	ENSMALG00000022327	rbm38	93	55.357	Monopterus_albus
ENSACAG00000016238	RBM38	76	75.401	ENSMALG00000004680	RBM38	70	75.401	Monopterus_albus
ENSACAG00000016238	RBM38	95	72.609	MGP_CAROLIEiJ_G0024745	Rbm38	92	77.727	Mus_caroli
ENSACAG00000016238	RBM38	95	72.609	ENSMUSG00000027510	Rbm38	92	77.727	Mus_musculus
ENSACAG00000016238	RBM38	95	71.967	MGP_PahariEiJ_G0026186	Rbm38	92	78.182	Mus_pahari
ENSACAG00000016238	RBM38	95	73.043	MGP_SPRETEiJ_G0025665	Rbm38	92	78.182	Mus_spretus
ENSACAG00000016238	RBM38	75	81.522	ENSMPUG00000006518	RBM38	93	80.749	Mustela_putorius_furo
ENSACAG00000016238	RBM38	90	74.886	ENSMLUG00000011140	RBM38	100	74.886	Myotis_lucifugus
ENSACAG00000016238	RBM38	90	59.111	ENSNBRG00000022685	rbm38	91	59.111	Neolamprologus_brichardi
ENSACAG00000016238	RBM38	90	67.521	ENSNBRG00000022545	-	95	68.511	Neolamprologus_brichardi
ENSACAG00000016238	RBM38	97	74.153	ENSODEG00000007980	RBM38	91	77.727	Octodon_degus
ENSACAG00000016238	RBM38	90	67.382	ENSONIG00000020324	-	95	68.376	Oreochromis_niloticus
ENSACAG00000016238	RBM38	90	55.696	ENSONIG00000017073	rbm38	95	55.696	Oreochromis_niloticus
ENSACAG00000016238	RBM38	90	84.259	ENSOANG00000009259	RBM38	83	84.259	Ornithorhynchus_anatinus
ENSACAG00000016238	RBM38	95	61.694	ENSORLG00000027180	-	95	66.387	Oryzias_latipes
ENSACAG00000016238	RBM38	90	54.393	ENSORLG00000012154	rbm38	93	54.812	Oryzias_latipes
ENSACAG00000016238	RBM38	90	56.250	ENSORLG00020017871	rbm38	93	56.250	Oryzias_latipes_hni
ENSACAG00000016238	RBM38	95	61.694	ENSORLG00020020751	-	95	66.387	Oryzias_latipes_hni
ENSACAG00000016238	RBM38	95	61.538	ENSORLG00015017040	-	95	66.949	Oryzias_latipes_hsok
ENSACAG00000016238	RBM38	90	56.485	ENSORLG00015012606	rbm38	93	56.485	Oryzias_latipes_hsok
ENSACAG00000016238	RBM38	95	62.602	ENSOMEG00000023912	-	95	67.234	Oryzias_melastigma
ENSACAG00000016238	RBM38	90	55.649	ENSOMEG00000006805	rbm38	93	55.649	Oryzias_melastigma
ENSACAG00000016238	RBM38	97	74.576	ENSOGAG00000029136	RBM38	90	78.182	Otolemur_garnettii
ENSACAG00000016238	RBM38	97	74.153	ENSPPRG00000009507	RBM38	82	90.909	Panthera_pardus
ENSACAG00000016238	RBM38	51	87.903	ENSPTRG00000045845	-	68	87.903	Pan_troglodytes
ENSACAG00000016238	RBM38	79	80.829	ENSPTRG00000013661	RBM38	82	91.919	Pan_troglodytes
ENSACAG00000016238	RBM38	88	63.380	ENSPANG00000033127	-	90	63.208	Papio_anubis
ENSACAG00000016238	RBM38	97	74.153	ENSPANG00000020919	-	82	91.919	Papio_anubis
ENSACAG00000016238	RBM38	90	64.807	ENSPKIG00000025417	rbm38	95	65.086	Paramormyrops_kingsleyae
ENSACAG00000016238	RBM38	95	63.866	ENSPKIG00000018122	-	95	86.486	Paramormyrops_kingsleyae
ENSACAG00000016238	RBM38	99	80.169	ENSPSIG00000011649	RBM38	93	85.714	Pelodiscus_sinensis
ENSACAG00000016238	RBM38	90	54.622	ENSPMGG00000011343	rbm38	94	55.042	Periophthalmus_magnuspinnatus
ENSACAG00000016238	RBM38	88	61.572	ENSPMGG00000017094	-	92	64.348	Periophthalmus_magnuspinnatus
ENSACAG00000016238	RBM38	90	84.259	ENSPCIG00000013648	RBM38	92	84.259	Phascolarctos_cinereus
ENSACAG00000016238	RBM38	88	56.223	ENSPFOG00000011658	rbm38	91	57.692	Poecilia_formosa
ENSACAG00000016238	RBM38	89	66.102	ENSPLAG00000002500	-	93	66.102	Poecilia_latipinna
ENSACAG00000016238	RBM38	88	55.365	ENSPLAG00000005218	rbm38	91	57.692	Poecilia_latipinna
ENSACAG00000016238	RBM38	89	55.745	ENSPMEG00000015770	rbm38	91	57.692	Poecilia_mexicana
ENSACAG00000016238	RBM38	88	56.652	ENSPREG00000007398	rbm38	91	58.120	Poecilia_reticulata
ENSACAG00000016238	RBM38	97	75.847	ENSPCOG00000026201	RBM38	81	91.919	Propithecus_coquereli
ENSACAG00000016238	RBM38	90	50.455	ENSPVAG00000006457	RBM38	91	50.909	Pteropus_vampyrus
ENSACAG00000016238	RBM38	93	57.456	ENSPNYG00000021373	rbm38	92	58.371	Pundamilia_nyererei
ENSACAG00000016238	RBM38	90	67.521	ENSPNYG00000019727	-	100	83.761	Pundamilia_nyererei
ENSACAG00000016238	RBM38	87	64.414	ENSPNAG00000010596	rbm38	91	64.414	Pygocentrus_nattereri
ENSACAG00000016238	RBM38	95	61.694	ENSPNAG00000015123	-	96	74.242	Pygocentrus_nattereri
ENSACAG00000016238	RBM38	95	74.348	ENSRNOG00000006420	Rbm38	92	76.818	Rattus_norvegicus
ENSACAG00000016238	RBM38	90	62.273	ENSRROG00000036388	-	90	62.273	Rhinopithecus_roxellana
ENSACAG00000016238	RBM38	90	78.082	ENSSBOG00000031053	RBM38	93	91.919	Saimiri_boliviensis_boliviensis
ENSACAG00000016238	RBM38	95	60.744	ENSSFOG00015004453	rbm38	92	66.960	Scleropages_formosus
ENSACAG00000016238	RBM38	90	57.563	ENSSDUG00000022611	rbm38	93	57.563	Seriola_dumerili
ENSACAG00000016238	RBM38	90	66.809	ENSSDUG00000021082	RBM38	95	68.085	Seriola_dumerili
ENSACAG00000016238	RBM38	90	60.090	ENSSLDG00000010845	rbm38	92	60.090	Seriola_lalandi_dorsalis
ENSACAG00000016238	RBM38	90	66.809	ENSSLDG00000011778	RBM38	95	68.085	Seriola_lalandi_dorsalis
ENSACAG00000016238	RBM38	90	65.909	ENSSPAG00000020989	RBM38	94	68.778	Stegastes_partitus
ENSACAG00000016238	RBM38	90	57.143	ENSSPAG00000011113	rbm38	93	57.143	Stegastes_partitus
ENSACAG00000016238	RBM38	97	75.000	ENSSSCG00000007504	RBM38	91	78.636	Sus_scrofa
ENSACAG00000016238	RBM38	90	58.120	ENSTRUG00000024954	rbm38	93	59.402	Takifugu_rubripes
ENSACAG00000016238	RBM38	95	61.355	ENSTRUG00000019869	-	95	65.833	Takifugu_rubripes
ENSACAG00000016238	RBM38	90	66.667	ENSTNIG00000007093	-	100	68.142	Tetraodon_nigroviridis
ENSACAG00000016238	RBM38	97	73.729	ENSUAMG00000019780	RBM38	91	77.727	Ursus_americanus
ENSACAG00000016238	RBM38	97	75.424	ENSVVUG00000017246	RBM38	91	79.091	Vulpes_vulpes
ENSACAG00000016238	RBM38	90	77.626	ENSXETG00000011268	rbm38	99	78.082	Xenopus_tropicalis
ENSACAG00000016238	RBM38	88	56.466	ENSXMAG00000023662	rbm38	91	57.082	Xiphophorus_maculatus