EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000016239 (Gene tree)
Gene ID: 100553031
Gene Symbol: RBM25
Alias: NET52|RNPC7|S164|Snu71|fSAP94
Full Name: RNA binding motif protein 25
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 28915 bases
Position: chr1:38904591-38933505
Accession: 100553031
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000016015	RRM_1	PF00076.22	6.9e-09	1	1
ENSACAP00000016015	PWI	PF01480.17	3.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000016335	RBM25-201	4262	XM_003214523	ENSACAP00000016015	837 (aa)	XP_003214571	G1KSE6

Gene Model

Click here to download ENSACAG00000016239's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000016239's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000016239	RBM25	50	80.047	ENSAPEG00000007514	rbm25a	53	78.554	Amphiprion_percula
ENSACAG00000016239	RBM25	56	96.137	ENSAPLG00000006643	RBM25	59	95.279	Anas_platyrhynchos
ENSACAG00000016239	RBM25	81	74.740	ENSAMXG00000024525	rbm25b	53	73.288	Astyanax_mexicanus
ENSACAG00000016239	RBM25	51	91.379	ENSCAPG00000005239	RBM25	57	92.442	Cavia_aperea
ENSACAG00000016239	RBM25	56	86.258	ENSCATG00000039651	RBM25	98	94.464	Cercocebus_atys
ENSACAG00000016239	RBM25	64	92.941	ENSCHOG00000008903	RBM25	63	92.941	Choloepus_hoffmanni
ENSACAG00000016239	RBM25	56	86.809	ENSCANG00000043874	RBM25	98	94.118	Colobus_angolensis_palliatus
ENSACAG00000016239	RBM25	86	71.910	ENSCSEG00000020737	rbm25b	52	73.671	Cynoglossus_semilaevis
ENSACAG00000016239	RBM25	71	42.534	ENSEBUG00000002963	rbm25b	51	71.212	Eptatretus_burgeri
ENSACAG00000016239	RBM25	82	93.772	ENSEEUG00000007350	RBM25	81	93.772	Erinaceus_europaeus
ENSACAG00000016239	RBM25	100	96.195	ENSFALG00000005445	RBM25	56	95.299	Ficedula_albicollis
ENSACAG00000016239	RBM25	100	65.960	ENSFHEG00000005318	rbm25a	50	71.154	Fundulus_heteroclitus
ENSACAG00000016239	RBM25	95	49.816	ENSGMOG00000014097	rbm25b	89	68.127	Gadus_morhua
ENSACAG00000016239	RBM25	76	75.245	ENSGMOG00000014070	rbm25a	85	73.634	Gadus_morhua
ENSACAG00000016239	RBM25	100	67.215	ENSGAFG00000001092	rbm25b	50	73.430	Gambusia_affinis
ENSACAG00000016239	RBM25	51	79.677	ENSHBUG00000016908	rbm25a	51	79.277	Haplochromis_burtoni
ENSACAG00000016239	RBM25	56	93.191	ENSHGLG00000014745	RBM25	56	93.617	Heterocephalus_glaber_female
ENSACAG00000016239	RBM25	83	95.545	ENSHGLG00100018236	-	99	93.299	Heterocephalus_glaber_male
ENSACAG00000016239	RBM25	53	73.438	ENSHCOG00000000142	rbm25b	52	75.735	Hippocampus_comes
ENSACAG00000016239	RBM25	53	77.556	ENSIPUG00000021051	rbm25b	52	79.087	Ictalurus_punctatus
ENSACAG00000016239	RBM25	95	69.975	ENSKMAG00000016242	rbm25a	54	77.108	Kryptolebias_marmoratus
ENSACAG00000016239	RBM25	100	68.514	ENSLBEG00000010667	rbm25b	52	77.536	Labrus_bergylta
ENSACAG00000016239	RBM25	100	80.453	ENSLACG00000011845	RBM25	50	89.655	Latimeria_chalumnae
ENSACAG00000016239	RBM25	51	84.318	ENSLOCG00000014196	rbm25b	51	84.300	Lepisosteus_oculatus
ENSACAG00000016239	RBM25	56	86.258	ENSMFAG00000040040	RBM25	98	94.464	Macaca_fascicularis
ENSACAG00000016239	RBM25	51	86.136	ENSMMUG00000002332	RBM25	100	95.238	Macaca_mulatta
ENSACAG00000016239	RBM25	56	86.258	ENSMLEG00000035157	RBM25	98	94.464	Mandrillus_leucophaeus
ENSACAG00000016239	RBM25	81	77.475	ENSMAMG00000000165	rbm25a	51	78.788	Mastacembelus_armatus
ENSACAG00000016239	RBM25	100	88.626	ENSMGAG00000011707	RBM25	56	94.206	Meleagris_gallopavo
ENSACAG00000016239	RBM25	56	94.658	ENSMODG00000006820	RBM25	99	96.195	Monodelphis_domestica
ENSACAG00000016239	RBM25	52	70.564	ENSMALG00000020441	rbm25b	84	73.874	Monopterus_albus
ENSACAG00000016239	RBM25	65	96.364	MGP_SPRETEiJ_G0018766	-	99	96.364	Mus_spretus
ENSACAG00000016239	RBM25	56	88.412	ENSMLUG00000024167	-	50	88.889	Myotis_lucifugus
ENSACAG00000016239	RBM25	100	95.368	ENSNGAG00000018465	Rbm25	56	94.043	Nannospalax_galili
ENSACAG00000016239	RBM25	64	95.045	ENSOPRG00000016744	-	66	95.045	Ochotona_princeps
ENSACAG00000016239	RBM25	100	95.136	ENSOANG00000001056	RBM25	55	94.255	Ornithorhynchus_anatinus
ENSACAG00000016239	RBM25	100	83.017	ENSOCUG00000013737	RBM25	56	94.043	Oryctolagus_cuniculus
ENSACAG00000016239	RBM25	56	86.258	ENSPANG00000018212	RBM25	98	94.464	Papio_anubis
ENSACAG00000016239	RBM25	51	77.253	ENSPKIG00000003203	rbm25b	53	79.954	Paramormyrops_kingsleyae
ENSACAG00000016239	RBM25	100	97.616	ENSPSIG00000006058	RBM25	100	97.616	Pelodiscus_sinensis
ENSACAG00000016239	RBM25	56	88.034	ENSPCIG00000011166	RBM25	58	89.316	Phascolarctos_cinereus
ENSACAG00000016239	RBM25	83	95.833	ENSPCAG00000006226	RBM25	83	95.833	Procavia_capensis
ENSACAG00000016239	RBM25	100	69.390	ENSPNAG00000012024	rbm25b	53	76.147	Pygocentrus_nattereri
ENSACAG00000016239	RBM25	56	88.795	ENSRROG00000035556	RBM25	97	95.763	Rhinopithecus_roxellana
ENSACAG00000016239	RBM25	56	94.658	ENSSHAG00000012859	RBM25	100	95.853	Sarcophilus_harrisii
ENSACAG00000016239	RBM25	91	65.478	ENSTNIG00000012222	rbm25b	66	78.072	Tetraodon_nigroviridis
ENSACAG00000016239	RBM25	61	94.074	ENSTBEG00000010538	-	55	94.074	Tupaia_belangeri
ENSACAG00000016239	RBM25	77	93.827	ENSVPAG00000009052	RBM25	100	88.981	Vicugna_pacos
ENSACAG00000016239	RBM25	95	73.116	ENSXETG00000021857	rbm25	53	88.148	Xenopus_tropicalis
ENSACAG00000016239	RBM25	100	71.563	ENSXCOG00000004043	RBM25	53	78.947	Xiphophorus_couchianus
ENSACAG00000016239	RBM25	100	67.887	ENSXCOG00000002222	rbm25b	52	73.494	Xiphophorus_couchianus
ENSACAG00000016239	RBM25	100	70.457	ENSXMAG00000009077	RBM25	51	74.880	Xiphophorus_maculatus
ENSACAG00000016239	RBM25	100	68.743	ENSXMAG00000017290	rbm25b	52	73.508	Xiphophorus_maculatus