EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000016323 (Gene tree)
Gene ID: 100557546
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 8029 bases
Position: chr2:140417161-140425189
Accession: 100557546
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000016085	zf-RNPHF	PF08080.12	1.4e-12	1	1
ENSACAP00000016085	RRM_1	PF00076.22	3.6e-34	1	3
ENSACAP00000016085	RRM_1	PF00076.22	3.6e-34	2	3
ENSACAP00000016085	RRM_1	PF00076.22	3.6e-34	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000016405	-	2036	XM_003217506	ENSACAP00000016085	460 (aa)	XP_016847243	G1KSH5

Gene Model

Click here to download ENSACAG00000016323's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000016323's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000016323	-	87	43.094	ENSACAG00000012921	GRSF1	67	43.714
ENSACAG00000016323	-	76	69.565	ENSACAG00000010365	HNRNPH3	79	70.290

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000016323	-	98	71.018	ENSAPOG00000016614	hnrnph1	99	70.796	Acanthochromis_polyacanthus
ENSACAG00000016323	-	91	74.820	ENSACIG00000008964	hnrnph1	91	77.179	Amphilophus_citrinellus
ENSACAG00000016323	-	91	75.300	ENSAOCG00000008372	hnrnph1	99	71.018	Amphiprion_ocellaris
ENSACAG00000016323	-	91	75.060	ENSAPEG00000012980	hnrnph1	99	70.796	Amphiprion_percula
ENSACAG00000016323	-	91	75.540	ENSATEG00000002792	hnrnph1	99	71.239	Anabas_testudineus
ENSACAG00000016323	-	81	82.796	ENSACLG00000003313	hnrnph1	98	82.796	Astatotilapia_calliptera
ENSACAG00000016323	-	98	71.523	ENSAMXG00000002483	hnrnph1	99	73.684	Astyanax_mexicanus
ENSACAG00000016323	-	99	71.302	ENSAMXG00000030703	hnrnph1l	84	71.523	Astyanax_mexicanus
ENSACAG00000016323	-	76	80.857	ENSCSEG00000015891	hnrnph1	99	70.575	Cynoglossus_semilaevis
ENSACAG00000016323	-	91	74.820	ENSCVAG00000014097	hnrnph1	99	70.705	Cyprinodon_variegatus
ENSACAG00000016323	-	77	80.627	ENSDARG00000005551	hnrnph1l	99	71.930	Danio_rerio
ENSACAG00000016323	-	91	72.967	ENSDARG00000040881	hnrnph1	99	71.272	Danio_rerio
ENSACAG00000016323	-	98	67.974	ENSELUG00000006715	hnrnph1	99	71.558	Esox_lucius
ENSACAG00000016323	-	91	71.190	ENSELUG00000021437	-	98	73.804	Esox_lucius
ENSACAG00000016323	-	98	70.575	ENSFHEG00000008474	hnrnph1	99	70.705	Fundulus_heteroclitus
ENSACAG00000016323	-	92	70.507	ENSGMOG00000006782	hnrnph1	88	76.533	Gadus_morhua
ENSACAG00000016323	-	80	80.759	ENSGAFG00000006280	hnrnph1	99	71.586	Gambusia_affinis
ENSACAG00000016323	-	80	77.236	ENSGACG00000018352	hnrnph1	96	72.304	Gasterosteus_aculeatus
ENSACAG00000016323	-	80	83.424	ENSHBUG00000010547	hnrnph1	97	83.424	Haplochromis_burtoni
ENSACAG00000016323	-	79	78.237	ENSHCOG00000004513	hnrnph1	99	70.419	Hippocampus_comes
ENSACAG00000016323	-	95	77.901	ENSIPUG00000024047	hnrnph1l	96	70.861	Ictalurus_punctatus
ENSACAG00000016323	-	76	81.481	ENSIPUG00000018262	hnrnph1	99	72.149	Ictalurus_punctatus
ENSACAG00000016323	-	95	72.414	ENSKMAG00000018802	hnrnph1	99	70.796	Kryptolebias_marmoratus
ENSACAG00000016323	-	91	74.580	ENSLBEG00000027811	hnrnph1	99	70.354	Labrus_bergylta
ENSACAG00000016323	-	91	81.991	ENSLOCG00000012510	hnrnph1	99	80.901	Lepisosteus_oculatus
ENSACAG00000016323	-	100	60.600	ENSMMUG00000017392	-	100	57.380	Macaca_mulatta
ENSACAG00000016323	-	100	60.600	ENSMNEG00000030544	-	100	57.380	Macaca_nemestrina
ENSACAG00000016323	-	79	82.192	ENSMAMG00000011478	hnrnph1	97	82.466	Mastacembelus_armatus
ENSACAG00000016323	-	91	75.779	ENSMZEG00005009791	hnrnph1	99	71.681	Maylandia_zebra
ENSACAG00000016323	-	79	80.274	ENSMMOG00000009064	hnrnph1	89	79.891	Mola_mola
ENSACAG00000016323	-	75	60.684	ENSMODG00000002200	-	94	57.530	Monodelphis_domestica
ENSACAG00000016323	-	79	81.918	ENSMALG00000003999	hnrnph1	98	82.192	Monopterus_albus
ENSACAG00000016323	-	80	83.424	ENSNBRG00000015406	hnrnph1	97	83.424	Neolamprologus_brichardi
ENSACAG00000016323	-	91	75.540	ENSONIG00000017754	hnrnph1	99	71.460	Oreochromis_niloticus
ENSACAG00000016323	-	91	76.019	ENSORLG00000006932	hnrnph1	99	71.018	Oryzias_latipes
ENSACAG00000016323	-	91	76.019	ENSORLG00020007881	hnrnph1	99	71.018	Oryzias_latipes_hni
ENSACAG00000016323	-	91	76.019	ENSORLG00015005306	hnrnph1	99	71.018	Oryzias_latipes_hsok
ENSACAG00000016323	-	91	75.779	ENSOMEG00000009827	hnrnph1	90	82.192	Oryzias_melastigma
ENSACAG00000016323	-	98	73.246	ENSPKIG00000018203	hnrnph1l	99	71.930	Paramormyrops_kingsleyae
ENSACAG00000016323	-	81	80.161	ENSPKIG00000009532	-	99	70.395	Paramormyrops_kingsleyae
ENSACAG00000016323	-	91	74.101	ENSPMGG00000012151	hnrnph1	99	70.575	Periophthalmus_magnuspinnatus
ENSACAG00000016323	-	80	80.217	ENSPFOG00000004097	hnrnph1	99	71.145	Poecilia_formosa
ENSACAG00000016323	-	80	80.217	ENSPLAG00000011771	hnrnph1	99	71.145	Poecilia_latipinna
ENSACAG00000016323	-	80	80.488	ENSPMEG00000019446	hnrnph1	99	71.366	Poecilia_mexicana
ENSACAG00000016323	-	91	69.784	ENSPREG00000005780	hnrnph1	99	71.586	Poecilia_reticulata
ENSACAG00000016323	-	91	75.779	ENSPNYG00000000204	hnrnph1	97	83.424	Pundamilia_nyererei
ENSACAG00000016323	-	99	71.302	ENSPNAG00000002784	hnrnph1l	99	75.936	Pygocentrus_nattereri
ENSACAG00000016323	-	98	71.523	ENSPNAG00000000439	hnrnph1	99	73.684	Pygocentrus_nattereri
ENSACAG00000016323	-	92	76.566	ENSSFOG00015016055	-	95	75.467	Scleropages_formosus
ENSACAG00000016323	-	94	75.688	ENSSFOG00015022796	hnrnph1l	97	76.263	Scleropages_formosus
ENSACAG00000016323	-	80	81.744	ENSSMAG00000007820	hnrnph1	87	81.744	Scophthalmus_maximus
ENSACAG00000016323	-	91	75.300	ENSSDUG00000008785	hnrnph1	99	71.018	Seriola_dumerili
ENSACAG00000016323	-	91	75.300	ENSSLDG00000010685	hnrnph1	99	71.018	Seriola_lalandi_dorsalis
ENSACAG00000016323	-	98	71.018	ENSSPAG00000009921	hnrnph1	99	70.796	Stegastes_partitus
ENSACAG00000016323	-	91	73.861	ENSTRUG00000020069	hnrnph1	99	69.469	Takifugu_rubripes
ENSACAG00000016323	-	99	81.522	ENSXETG00000018321	hnrnph1	100	79.348	Xenopus_tropicalis
ENSACAG00000016323	-	80	81.572	ENSXCOG00000009133	hnrnph1	89	82.114	Xiphophorus_couchianus
ENSACAG00000016323	-	80	80.759	ENSXMAG00000021332	hnrnph1	91	81.301	Xiphophorus_maculatus